Conservation of cofitness between PP_2337 and PP_1629 in Pseudomonas putida KT2440

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2337 aconitate isomerase 1.0 PP_1629 Protein RecA 0.30 20
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_4115 2-methylaconitate cis-trans isomerase 0.89 PfGW456L13_4668 RecA protein low > 87
Cupriavidus basilensis FW507-4G11 0.85 RR42_RS11275 3-methylitaconate isomerase 0.67 RR42_RS03080 recombinase RecA low > 128
Pseudomonas simiae WCS417 0.84 PS417_21065 3-methylitaconate isomerase 0.88 PS417_05815 recombinase RecA low > 88
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_00885 3-methylitaconate isomerase 0.88 AO353_16805 recombinase RecA low > 101
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_3822 2-methylaconitate cis-trans isomerase 0.88 Pf1N1B4_3143 RecA protein — —
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF 0.88 PFLU_RS05885 recombinase RecA low > 109
Pseudomonas fluorescens SBW25 0.84 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF 0.88 PFLU_RS05885 recombinase RecA low > 109
Ralstonia solanacearum PSI07 0.83 RPSI07_RS00385 2-methylaconitate cis-trans isomerase PrpF 0.66 RPSI07_RS21260 recombinase RecA low > 81
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_6064 2-methylaconitate isomerase 0.88 Pf6N2E2_2993 RecA protein — —
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_20880 3-methylitaconate isomerase 0.88 AO356_05670 recombinase RecA low > 104
Lysobacter sp. OAE881 0.83 ABIE51_RS09485 2-methylaconitate cis-trans isomerase PrpF 0.71 ABIE51_RS07800 recombinase RecA — —
Ralstonia sp. UNC404CL21Col 0.83 ABZR87_RS16730 2-methylaconitate cis-trans isomerase PrpF 0.65 ABZR87_RS07965 recombinase RecA low > 80
Ralstonia solanacearum GMI1000 0.83 RS_RS17725 2-methylaconitate cis-trans isomerase PrpF 0.65 RS_RS02760 DNA recombination/repair protein RecA — —
Pseudomonas sp. RS175 0.82 PFR28_02924 2-methyl-aconitate isomerase 0.88 PFR28_00472 Protein RecA low > 88
Pseudomonas sp. S08-1 0.82 OH686_01675 probable AcnD-accessory protein PrpF 0.89 OH686_18205 protein RecA — —
Paraburkholderia sabiae LMG 24235 0.82 QEN71_RS31055 2-methylaconitate cis-trans isomerase PrpF 0.68 QEN71_RS02335 recombinase RecA — —
Shewanella sp. ANA-3 0.81 Shewana3_3828 methylitaconate delta2-delta3-isomerase (RefSeq) 0.72 Shewana3_1126 recA recombinase A (RefSeq) low > 73
Xanthomonas campestris pv. campestris strain 8004 0.81 Xcc-8004.3976.1 2-methylaconitate cis-trans isomerase 0.69 Xcc-8004.3111.1 RecA protein — —
Burkholderia phytofirmans PsJN 0.81 BPHYT_RS30140 3-methylitaconate isomerase 0.68 BPHYT_RS16360 recombinase RecA — —
Dyella japonica UNC79MFTsu3.2 0.81 ABZR86_RS08430 2-methylaconitate cis-trans isomerase PrpF 0.74 ABZR86_RS00660 recombinase RecA low > 74
Shewanella oneidensis MR-1 0.81 SO0342 conserved hypothetical protein (NCBI ptt file) 0.73 SO3430 recA recA protein (NCBI ptt file) low > 76
Ralstonia solanacearum UW163 0.81 UW163_RS23455 2-methylaconitate cis-trans isomerase PrpF 0.65 UW163_RS01625 recombinase RecA — —
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS22835 2-methylaconitate cis-trans isomerase PrpF 0.65 RALBFv3_RS12010 recombinase RecA low > 76
Paraburkholderia graminis OAS925 0.81 ABIE53_005044 putative AcnD-accessory protein PrpF 0.69 ABIE53_003448 recombination protein RecA low > 113
Pseudomonas stutzeri RCH2 0.80 Psest_2318 probable AcnD-accessory protein PrpF 0.89 Psest_2872 protein RecA — —
Paraburkholderia bryophila 376MFSha3.1 0.80 H281DRAFT_02982 2-methylaconitate cis-trans isomerase 0.69 H281DRAFT_04208 RecA protein low > 103
Variovorax sp. SCN45 0.80 GFF269 2-methylaconitate isomerase 0.65 GFF5390 RecA protein low > 127
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_2088 2-methylaconitate cis-trans isomerase 0.88 Psyr_1378 RecA protein low > 86
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_2088 2-methylaconitate cis-trans isomerase 0.88 Psyr_1378 RecA protein low > 86
Herbaspirillum seropedicae SmR1 0.78 HSERO_RS11420 3-methylitaconate isomerase 0.64 HSERO_RS03270 protein RecA — —
Acinetobacter radioresistens SK82 0.78 MPMX26_00659 2-methyl-aconitate isomerase 0.74 MPMX26_01308 Protein RecA low > 36
Marinobacter adhaerens HP15 0.76 HP15_1929 AcnD-accessory protein PrpF 0.80 HP15_1048 recombinase A — —
Acidovorax sp. GW101-3H11 0.76 Ac3H11_2325 2-methylaconitate cis-trans isomerase 0.66 Ac3H11_1255 RecA protein — —
Kangiella aquimarina DSM 16071 0.76 B158DRAFT_1346 2-methylaconitate cis-trans isomerase 0.73 B158DRAFT_1531 protein RecA low > 40
Shewanella amazonensis SB2B 0.75 Sama_3297 hypothetical protein (RefSeq) 0.72 Sama_1046 recA recombinase A (RefSeq) low > 62
Azospirillum brasilense Sp245 0.75 AZOBR_RS24310 3-methylitaconate isomerase 0.68 AZOBR_RS11095 recombinase RecA low > 97
Shewanella loihica PV-4 0.74 Shew_1823 putative AcnD-accessory protein PrpF (RefSeq) 0.71 Shew_1215 recA recombinase A (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.72 MIT1002_03132 3-methylitaconate isomerase 0.75 MIT1002_00955 Recombinase A — —
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_06750 2-methylaconitate cis-trans isomerase PrpF 0.73 CSW01_02875 DNA recombination/repair protein RecA low > 62
Variovorax sp. OAS795 0.59 ABID97_RS19020 2-methylaconitate cis-trans isomerase PrpF 0.65 ABID97_RS02275 recombinase RecA low > 91

Not shown: 0 genomes with orthologs for PP_2337 only; 60 genomes with orthologs for PP_1629 only