Conservation of cofitness between PP_5033 and PP_0422 in Pseudomonas putida KT2440

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5033 Urocanate hydratase 1.0 PP_0422 Indole-3-glycerol phosphate synthase 0.15 13
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_326 Urocanate hydratase (EC 4.2.1.49) (from data) 0.87 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 87
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_1587 Urocanate hydratase (EC 4.2.1.49) (from data) 0.87 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 87
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_12250 Urocanate hydratase (EC 4.2.1.49) (from data) 0.86 AO353_07210 indole-3-glycerol-phosphate synthase 0.20 63
Pseudomonas sp. S08-1 0.93 OH686_16745 urocanate hydratase 0.81 OH686_15140 Indole-3-glycerol phosphate synthase low > 80
Pseudomonas sp. RS175 0.93 PFR28_04965 Urocanate hydratase 0.87 PFR28_04043 Indole-3-glycerol phosphate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_3805 Urocanate hydratase (EC 4.2.1.49) (from data) 0.88 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 103
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS01775 urocanate hydratase 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC low > 109
Cupriavidus basilensis FW507-4G11 0.92 RR42_RS14645 urocanate hydratase 0.51 RR42_RS18310 indole-3-glycerol-phosphate synthase low > 128
Pseudomonas fluorescens SBW25 0.92 PFLU_RS01775 urocanate hydratase 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC low > 109
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_09630 Urocanate hydratase (EC 4.2.1.49) (from data) 0.87 AO356_14440 indole-3-glycerol-phosphate synthase low > 104
Pseudomonas simiae WCS417 0.92 PS417_01720 Urocanate hydratase (EC 4.2.1.49) (from data) 0.86 PS417_25710 indole-3-glycerol-phosphate synthase low > 88
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_4828 urocanate hydratase 0.82 Psyr_4579 indole-3-glycerol phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_4828 urocanate hydratase 0.82 Psyr_4579 indole-3-glycerol phosphate synthase low > 86
Dyella japonica UNC79MFTsu3.2 0.84 ABZR86_RS07755 urocanate hydratase 0.50 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC low > 74
Rhodanobacter denitrificans FW104-10B01 0.83 LRK54_RS16320 urocanate hydratase 0.48 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC low > 59
Rhodanobacter denitrificans MT42 0.83 LRK55_RS16070 urocanate hydratase 0.47 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC low > 63
Rhodanobacter sp. FW510-T8 0.82 OKGIIK_08350 hutU urocanate hydratase 0.52 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC low > 52
Lysobacter sp. OAE881 0.81 ABIE51_RS06295 urocanate hydratase 0.53 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC low > 62
Sinorhizobium meliloti 1021 0.77 SM_b21163 Urocanate hydratase (EC 4.2.1.49) (from data) 0.40 SMc00236 Indole-3-glycerol phosphate synthase low > 103
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS01030 urocanate hydratase 0.49 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC low > 80
Variovorax sp. SCN45 0.77 GFF6408 Urocanate hydratase (EC 4.2.1.49) 0.48 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) — —
Agrobacterium fabrum C58 0.77 Atu3931 urocanate hydratase 0.41 Atu1688 indole-3-glycerol-phosphate synthase low > 89
Ralstonia solanacearum PSI07 0.77 RPSI07_RS11910 urocanate hydratase 0.49 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC — —
Rhizobium sp. OAE497 0.76 ABIE40_RS20360 urocanate hydratase 0.45 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC — —
Variovorax sp. OAS795 0.76 ABID97_RS03425 urocanate hydratase 0.50 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC low > 91
Sphingomonas koreensis DSMZ 15582 0.76 Ga0059261_3961 Urocanate hydratase (EC 4.2.1.49) (from data) 0.44 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 68
Acidovorax sp. GW101-3H11 0.76 Ac3H11_2557 Urocanate hydratase (EC 4.2.1.49) (from data) 0.49 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.76 GFF3590 Urocanate hydratase (EC 4.2.1.49) 0.50 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 90
Bosea sp. OAE506 0.76 ABIE41_RS23655 urocanate hydratase 0.41 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC — —
Rhodospirillum rubrum S1H 0.76 Rru_A1304 Urocanate hydratase (NCBI) 0.45 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) low > 58
Azospirillum brasilense Sp245 0.75 AZOBR_RS21740 urocanate hydratase 0.42 AZOBR_RS07450 indole-3-glycerol-phosphate synthase low > 97
Ralstonia solanacearum GMI1000 0.75 RS_RS13255 urocanate hydratase 0.49 RS_RS14450 Indole-3-glycerol phosphate synthase 1 — —
Ralstonia solanacearum UW163 0.75 UW163_RS08230 urocanate hydratase 0.49 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia solanacearum IBSBF1503 0.75 RALBFv3_RS05395 urocanate hydratase 0.49 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC — —
Caulobacter crescentus NA1000 Δfur 0.75 CCNA_01008 urocanate hydratase 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase low > 67
Caulobacter crescentus NA1000 0.75 CCNA_01008 urocanate hydratase 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase low > 66
Azospirillum sp. SherDot2 0.75 MPMX19_04936 Urocanate hydratase 0.44 MPMX19_01014 Indole-3-glycerol phosphate synthase low > 112
Phaeobacter inhibens DSM 17395 0.74 PGA1_c36320 Urocanate hydratase (EC 4.2.1.49) (from data) 0.45 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC — —
Xanthomonas campestris pv. campestris strain 8004 0.73 Xcc-8004.3298.1 Urocanate hydratase (EC 4.2.1.49) 0.58 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 74
Castellaniella sp019104865 MT123 0.73 ABCV34_RS12785 urocanate hydratase 0.51 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC — —
Brevundimonas sp. GW460-12-10-14-LB2 0.73 A4249_RS06625 urocanate hydratase 0.42 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC — —
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS23505 urocanate hydratase 0.53 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC low > 153
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS07565 urocanate hydratase 0.51 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.22 55
Paraburkholderia graminis OAS925 0.71 ABIE53_001731 urocanate hydratase 0.50 ABIE53_003643 indole-3-glycerol phosphate synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_04871 urocanate hydratase 0.50 H281DRAFT_05712 indole-3-glycerol phosphate synthase low > 103
Pontibacter actiniarum KMM 6156, DSM 19842 0.58 CA264_08875 urocanate hydratase 0.23 CA264_05070 indole-3-glycerol phosphate synthase 0.39 58
Bacteroides stercoris CC31F 0.29 HMPREF1181_RS00360 urocanate hydratase 0.27 HMPREF1181_RS15340 indole-3-glycerol phosphate synthase TrpC low > 56

Not shown: 17 genomes with orthologs for PP_5033 only; 18 genomes with orthologs for PP_0422 only