Conservation of cofitness between PP_0937 and PP_0405 in Pseudomonas putida KT2440

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0937 endoribonuclease G (RNAse G) 1.0 PP_0405 conserved protein of unknown function 0.50 14
Pseudomonas simiae WCS417 0.92 PS417_04270 ribonuclease G 0.72 PS417_25790 aminoglycoside phosphotransferase low > 88
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_05230 ribonuclease G 0.76 AO353_07295 aminoglycoside phosphotransferase low > 101
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_07110 ribonuclease G 0.75 AO356_14355 aminoglycoside phosphotransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_3283 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.75 Pf6N2E2_4809 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases low > 103
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_5029 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.76 PfGW456L13_1204 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases low > 87
Pseudomonas fluorescens SBW25 0.91 PFLU_RS04325 ribonuclease G 0.76 PFLU_RS27445 phosphotransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS04325 ribonuclease G 0.76 PFLU_RS27445 phosphotransferase low > 109
Pseudomonas sp. RS175 0.91 PFR28_00158 Ribonuclease G 0.74 PFR28_04060 N-acetylmuramate/N-acetylglucosamine kinase low > 88
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_1095 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.65 Pf1N1B4_2532 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_4159 RNAse G 0.75 Psyr_4623 Aminoglycoside phosphotransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_4159 RNAse G 0.75 Psyr_4623 Aminoglycoside phosphotransferase low > 86
Pseudomonas sp. S08-1 0.89 OH686_08595 Ribonuclease G 0.63 OH686_15060 Phosphotransferase low > 80
Pseudomonas stutzeri RCH2 0.89 Psest_3323 ribonuclease, Rne/Rng family 0.70 Psest_3664 Predicted phosphotransferase related to Ser/Thr protein kinases low > 67
Marinobacter adhaerens HP15 0.68 HP15_2451 ribonuclease, Rne/Rng family 0.38 HP15_3282 aminoglycoside phosphotransferase low > 73
Kangiella aquimarina DSM 16071 0.65 B158DRAFT_2069 ribonuclease, Rne/Rng family 0.35 B158DRAFT_0792 Predicted phosphotransferase related to Ser/Thr protein kinases low > 40
Rhodanobacter sp. FW510-T8 0.61 OKGIIK_10290 rng ribonuclease G 0.38 OKGIIK_09975 Aminoglycoside phosphotransferase low > 52
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS24430 ribonuclease G 0.42 QEN71_RS02110 phosphotransferase low > 153
Dyella japonica UNC79MFTsu3.2 0.59 ABZR86_RS21730 ribonuclease G 0.38 ABZR86_RS09500 phosphotransferase low > 74
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04515 RNAse G 0.40 H281DRAFT_04636 hypothetical protein low > 103
Paraburkholderia graminis OAS925 0.59 ABIE53_001538 ribonuclease G 0.39 ABIE53_000796 aminoglycoside/choline kinase family phosphotransferase low > 113
Xanthomonas campestris pv. campestris strain 8004 0.59 Xcc-8004.1880.1 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.38 Xcc-8004.1681.1 hypothetical protein low > 74
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS06375 ribonuclease 0.40 BPHYT_RS03285 aminoglycoside phosphotransferase low > 109
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS17790 ribonuclease 0.40 HSERO_RS03520 aminoglycoside phosphotransferase — —
Dechlorosoma suillum PS 0.58 Dsui_0434 ribonuclease, Rne/Rng family 0.46 Dsui_1588 aminoglycoside phosphotransferase low > 51
Rhodanobacter denitrificans MT42 0.58 LRK55_RS03155 ribonuclease G 0.37 LRK55_RS02855 phosphotransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.58 LRK54_RS03405 ribonuclease G 0.37 LRK54_RS03105 phosphotransferase low > 59
Acinetobacter radioresistens SK82 0.57 MPMX26_00646 Ribonuclease G 0.29 MPMX26_01212 N-acetylmuramate/N-acetylglucosamine kinase low > 36
Shewanella sp. ANA-3 0.57 Shewana3_3644 ribonuclease G (RefSeq) 0.31 Shewana3_3205 aminoglycoside phosphotransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.56 SO4094 cafA ribonuclease G (NCBI ptt file) 0.32 SO3635 hypothetical phosphotransferase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.56 Shew_0407 ribonuclease G (RefSeq) 0.33 Shew_0883 aminoglycoside phosphotransferase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.56 Sama_0471 ribonuclease G (RefSeq) 0.31 Sama_2815 phosphotransferase (RefSeq) low > 62
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS04700 ribonuclease G 0.44 RR42_RS02765 aminoglycoside phosphotransferase low > 128
Castellaniella sp019104865 MT123 0.55 ABCV34_RS02480 ribonuclease G 0.37 ABCV34_RS09505 phosphotransferase low > 48
Ralstonia solanacearum PSI07 0.55 RPSI07_RS13650 ribonuclease G 0.46 RPSI07_RS21480 aminoglycoside phosphotransferase — —
Ralstonia solanacearum GMI1000 0.55 RS_RS11025 ribonuclease G 0.45 RS_RS02560 aminoglycoside phosphotransferase — —
Ralstonia solanacearum UW163 0.55 UW163_RS10095 ribonuclease G 0.45 UW163_RS01850 aminoglycoside phosphotransferase — —
Ralstonia solanacearum IBSBF1503 0.55 RALBFv3_RS03575 ribonuclease G 0.45 RALBFv3_RS11735 aminoglycoside phosphotransferase — —
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS15440 ribonuclease G 0.46 ABZR87_RS07690 aminoglycoside phosphotransferase family protein low > 80
Variovorax sp. SCN45 0.53 GFF295 Ribonuclease G 0.42 GFF3254 Phosphotransferase involved in threonylcarbamoyladenosine t(6)A37 formation in tRNA low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF4531 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.40 GFF2463 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases 0.54 59

Not shown: 32 genomes with orthologs for PP_0937 only; 10 genomes with orthologs for PP_0405 only