Conservation of cofitness between NOLOHH_06485 and NOLOHH_01250 in Escherichia coli ECOR27

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_06485 rhtC threonine export protein RhtC 1.0 NOLOHH_01250 hupB DNA-binding protein HU-beta 0.57 12
Escherichia coli ECRC98 1.00 JDDGAC_17980 rhtC threonine export protein RhtC 1.00 JDDGAC_11970 hupB DNA-binding protein HU-beta low > 86
Escherichia coli ECRC100 1.00 OKFHMN_14355 rhtC threonine export protein RhtC 1.00 OKFHMN_08315 hupB DNA-binding protein HU-beta low > 80
Escherichia coli ECRC99 1.00 KEDOAH_13795 rhtC threonine export protein RhtC 1.00 KEDOAH_19650 hupB DNA-binding protein HU-beta — —
Escherichia coli ECRC102 1.00 NIAGMN_12110 rhtC threonine export protein RhtC 1.00 NIAGMN_06370 hupB DNA-binding protein HU-beta — —
Escherichia coli BW25113 1.00 b3823 rhtC threonine efflux system (NCBI) 0.99 b0440 hupB HU, DNA-binding transcriptional regulator, beta subunit (NCBI) low > 76
Escherichia coli ECRC101 1.00 MCAODC_04860 rhtC threonine export protein RhtC 1.00 MCAODC_27540 hupB DNA-binding protein HU-beta low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04228 Threonine efflux protein 0.99 OHPLBJKB_03233 DNA-binding protein HU-beta low > 73
Escherichia coli BL21 1.00 ECD_03702 threonine efflux pump 0.99 ECD_00392 HU, DNA-binding transcriptional regulator, beta subunit low > 61
Escherichia coli ECOR38 1.00 HEPCGN_13055 rhtC threonine export protein RhtC 1.00 HEPCGN_06930 hupB DNA-binding protein HU-beta low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS21940 threonine export protein RhtC 1.00 ECOLIN_RS02640 nucleoid-associated protein HU-beta low > 55
Escherichia fergusonii Becca 0.99 EFB2_04814 Threonine efflux protein 0.99 EFB2_03617 DNA-binding protein HU-beta low > 86
Escherichia coli ECRC62 0.99 BNILDI_05045 rhtC threonine export protein RhtC 1.00 BNILDI_22665 hupB DNA-binding protein HU-beta low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF249 L-lysine permease 0.99 GFF4356 DNA-binding protein HU-beta low > 78
Klebsiella michiganensis M5al 0.88 BWI76_RS01250 threonine export protein RhtC 0.95 BWI76_RS06540 DNA-binding protein HU-beta low > 92
Enterobacter asburiae PDN3 0.87 EX28DRAFT_4488 The Resistance to Homoserine/Threonine (RhtB) Family protein 0.95 EX28DRAFT_2530 Bacterial nucleoid DNA-binding protein low > 76
Enterobacter sp. TBS_079 0.84 MPMX20_04457 Threonine efflux protein 0.95 MPMX20_01031 DNA-binding protein HU-beta low > 85
Serratia liquefaciens MT49 0.78 IAI46_00775 threonine export protein RhtC 0.94 IAI46_05025 DNA-binding protein HU-beta low > 86
Dickeya dianthicola 67-19 0.77 HGI48_RS20000 threonine export protein RhtC 0.90 HGI48_RS05700 DNA-binding protein HU-beta low > 71
Dickeya dadantii 3937 0.77 DDA3937_RS19845 threonine export protein RhtC 0.90 DDA3937_RS05655 DNA-binding protein HU-beta low > 74
Dickeya dianthicola ME23 0.77 DZA65_RS21040 threonine export protein RhtC 0.90 DZA65_RS06025 DNA-binding protein HU-beta low > 75
Pantoea sp. MT58 0.75 IAI47_18355 threonine export protein RhtC 0.86 IAI47_14640 DNA-binding protein HU-beta low > 76
Rahnella sp. WP5 0.74 EX31_RS15215 threonine export protein RhtC 0.90 EX31_RS22260 DNA-binding protein HU-beta low > 89
Pectobacterium carotovorum WPP14 0.72 HER17_RS01400 threonine export protein RhtC 0.91 HER17_RS15835 DNA-binding protein HU-beta low > 75
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS11510 homoserine/threonine efflux transporter 0.65 ABZR86_RS07315 HU family DNA-binding protein — —
Acinetobacter radioresistens SK82 0.50 MPMX26_00309 Threonine efflux protein 0.73 MPMX26_01331 DNA-binding protein HU-beta — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_2743 Lysine exporter protein (LYSE/YGGA) 0.73 Psyr_1750 bacterial nucleoid protein HU beta subunit — —
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_2743 Lysine exporter protein (LYSE/YGGA) 0.73 Psyr_1750 bacterial nucleoid protein HU beta subunit — —
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_01025 LysE family translocator 0.77 CSW01_09600 DNA-binding protein HU-beta low > 62
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS00520 LysE family transporter 0.71 QEN71_RS21970 HU family DNA-binding protein low > 153
Pseudomonas stutzeri RCH2 0.27 Psest_3222 Putative threonine efflux protein 0.81 Psest_2284 Bacterial nucleoid DNA-binding protein — —
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_03862 Threonine/homoserine/homoserine lactone efflux protein 0.69 H281DRAFT_00899 bacterial nucleoid protein Hbs — —
Paraburkholderia graminis OAS925 0.27 ABIE53_004917 threonine/homoserine/homoserine lactone efflux protein 0.69 ABIE53_002118 DNA-binding protein HU-beta low > 113
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_06930 lysine transporter LysE 0.75 AO356_01735 DNA-binding protein HU — —
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS33475 threonine transporter 0.69 BPHYT_RS09465 transcriptional regulator low > 109
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_1618 L-lysine permease 0.75 PfGW456L13_2555 DNA-binding protein HU-beta — —
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_3245 L-lysine permease 0.75 Pf6N2E2_2215 DNA-binding protein HU-beta — —
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS04580 lysine transporter LysE 0.75 PFLU_RS19155 HU family DNA-binding protein — —
Pseudomonas simiae WCS417 0.26 PS417_04535 lysine transporter LysE 0.75 PS417_17220 transcriptional regulator HU subunit alpha — —
Pseudomonas fluorescens SBW25 0.26 PFLU_RS04580 lysine transporter LysE 0.75 PFLU_RS19155 HU family DNA-binding protein — —
Shewanella sp. ANA-3 0.25 Shewana3_3536 lysine exporter protein LysE/YggA (RefSeq) 0.84 Shewana3_2658 histone family protein DNA-binding protein (RefSeq) — —
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_15005 lysine transporter LysE 0.75 AO353_20190 DNA-binding protein HU — —
Shewanella oneidensis MR-1 0.25 SO0765 threonine efflux protein, putative (NCBI ptt file) 0.84 SO1797 DNA-binding protein, HU family (NCBI ptt file) — —
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_2955 L-lysine permease 0.75 Pf1N1B4_3948 DNA-binding protein HU-beta — —
Pseudomonas sp. S08-1 0.25 OH686_06335 L-lysine permease 0.80 OH686_03630 DNA-binding protein HU-beta — —
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0068 Putative threonine efflux protein 0.80 B158DRAFT_1039 Bacterial nucleoid DNA-binding protein low > 40
Shewanella loihica PV-4 0.22 Shew_1462 lysine exporter protein LysE/YggA (RefSeq) 0.80 Shew_2505 histone family protein DNA-binding protein (RefSeq) — —
Variovorax sp. SCN45 0.22 GFF6288 L-lysine permease 0.68 GFF2853 DNA-binding protein HU-beta low > 127
Rhodospirillum rubrum S1H 0.22 Rru_A3712 Lysine exporter protein (LYSE/YGGA) (NCBI) 0.54 Rru_A1553 Histone-like DNA-binding protein (NCBI) — —
Shewanella amazonensis SB2B 0.22 Sama_1550 threonine efflux protein, putative (RefSeq) 0.80 Sama_1227 HU family DNA-binding protein (RefSeq) — —
Alteromonas macleodii MIT1002 0.22 MIT1002_02144 Threonine efflux protein 0.83 MIT1002_02756 hypothetical protein — —
Agrobacterium fabrum C58 0.21 Atu2633 RhtB family transporter 0.46 Atu1262 histone-like protein — —
Marinobacter adhaerens HP15 0.21 HP15_2657 threonine efflux protein 0.77 HP15_2182 histone-like bacterial DNA-binding protein — —
Azospirillum brasilense Sp245 0.19 AZOBR_RS14545 threonine transporter 0.58 AZOBR_RS23140 transcriptional regulator — —
Caulobacter crescentus NA1000 0.18 CCNA_00488 amino acid efflux permease 0.46 CCNA_02036 DNA-binding protein HU low > 66
Caulobacter crescentus NA1000 Δfur 0.18 CCNA_00488 amino acid efflux permease 0.46 CCNA_02036 DNA-binding protein HU 0.65 10
Desulfovibrio vulgaris Miyazaki F 0.18 DvMF_2771 Lysine exporter protein (LYSE/YGGA) (RefSeq) 0.53 DvMF_0500 histone family protein DNA-binding protein (RefSeq) low > 51

Not shown: 6 genomes with orthologs for NOLOHH_06485 only; 29 genomes with orthologs for NOLOHH_01250 only