Conservation of cofitness between JDDGAC_13950 and JDDGAC_21765 in Escherichia coli ECRC98

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_13950 pcnB polynucleotide adenylyltransferase PcnB 1.0 JDDGAC_21765 pnp polyribonucleotide nucleotidyltransferase 0.93 10
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB 1.00 ECOLIN_RS18175 polyribonucleotide nucleotidyltransferase low > 55
Escherichia coli ECOR38 1.00 HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB 1.00 HEPCGN_17015 pnp polyribonucleotide nucleotidyltransferase — —
Escherichia coli ECRC102 1.00 NIAGMN_08205 pcnB polynucleotide adenylyltransferase PcnB 1.00 NIAGMN_15900 pnp polyribonucleotide nucleotidyltransferase — —
Escherichia coli ECRC100 1.00 OKFHMN_10355 pcnB polynucleotide adenylyltransferase PcnB 1.00 OKFHMN_18140 pnp polyribonucleotide nucleotidyltransferase low > 80
Escherichia coli BW25113 1.00 b0143 pcnB poly(A) polymerase I (VIMSS) 1.00 b3164 pnp polynucleotide phosphorylase/polyadenylase (RefSeq) 0.38 7
Escherichia coli ECRC101 1.00 MCAODC_00870 pcnB polynucleotide adenylyltransferase PcnB 1.00 MCAODC_08660 pnp polyribonucleotide nucleotidyltransferase low > 87
Escherichia coli ECRC99 1.00 KEDOAH_17800 pcnB polynucleotide adenylyltransferase PcnB 1.00 KEDOAH_10010 pnp polyribonucleotide nucleotidyltransferase — —
Escherichia coli ECRC62 1.00 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB 1.00 BNILDI_01595 pnp polyribonucleotide nucleotidyltransferase 0.98 1
Escherichia coli BL21 1.00 ECD_00142 poly(A) polymerase 1.00 ECD_03031 polynucleotide phosphorylase/polyadenylase low > 61
Escherichia fergusonii Becca 1.00 EFB2_03901 Poly(A) polymerase I 1.00 EFB2_00659 Polyribonucleotide nucleotidyltransferase low > 86
Escherichia coli ECOR27 1.00 NOLOHH_02700 pcnB polynucleotide adenylyltransferase PcnB 1.00 NOLOHH_09940 pnp polyribonucleotide nucleotidyltransferase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03519 Poly(A) polymerase I 1.00 OHPLBJKB_00536 Polyribonucleotide nucleotidyltransferase low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF89 Poly(A) polymerase (EC 2.7.7.19) 0.96 GFF1502 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) low > 78
Enterobacter asburiae PDN3 0.85 EX28DRAFT_3732 poly(A) polymerase 0.95 EX28DRAFT_3213 polyribonucleotide nucleotidyltransferase — —
Enterobacter sp. TBS_079 0.85 MPMX20_00829 Poly(A) polymerase I 0.95 MPMX20_04068 Polyribonucleotide nucleotidyltransferase — —
Klebsiella michiganensis M5al 0.83 BWI76_RS05005 polynucleotide adenylyltransferase 0.94 BWI76_RS25065 polyribonucleotide nucleotidyltransferase low > 92
Dickeya dadantii 3937 0.78 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB 0.89 DDA3937_RS03090 polyribonucleotide nucleotidyltransferase low > 74
Pantoea sp. MT58 0.78 IAI47_15645 polynucleotide adenylyltransferase PcnB 0.90 IAI47_17005 polyribonucleotide nucleotidyltransferase low > 76
Erwinia tracheiphila SCR3 0.77 LU632_RS20090 pcnB polynucleotide adenylyltransferase PcnB 0.91 LU632_RS21040 pnp polyribonucleotide nucleotidyltransferase — —
Dickeya dianthicola 67-19 0.77 HGI48_RS16060 polynucleotide adenylyltransferase PcnB 0.88 HGI48_RS03260 polyribonucleotide nucleotidyltransferase low > 71
Dickeya dianthicola ME23 0.77 DZA65_RS17145 polynucleotide adenylyltransferase PcnB 0.89 DZA65_RS03255 polyribonucleotide nucleotidyltransferase low > 75
Serratia liquefaciens MT49 0.77 IAI46_21220 polynucleotide adenylyltransferase PcnB 0.89 IAI46_01955 polyribonucleotide nucleotidyltransferase low > 86
Pectobacterium carotovorum WPP14 0.75 HER17_RS05570 polynucleotide adenylyltransferase PcnB 0.88 HER17_RS18190 polyribonucleotide nucleotidyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_03145 polynucleotide adenylyltransferase PcnB 0.77 CSW01_03410 polyribonucleotide nucleotidyltransferase low > 62
Shewanella oneidensis MR-1 0.54 SO0872 pcnB polyA polymerase (NCBI ptt file) 0.71 SO1209 pnp polyribonucleotide nucleotidyltransferase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.54 Shewana3_3406 poly(A) polymerase (RefSeq) 0.72 Shewana3_1035 polynucleotide phosphorylase/polyadenylase (RefSeq) — —
Alteromonas macleodii MIT1002 0.53 MIT1002_03692 Poly(A) polymerase I precursor 0.71 MIT1002_01888 Polyribonucleotide nucleotidyltransferase — —
Shewanella loihica PV-4 0.52 Shew_3131 poly(A) polymerase (RefSeq) 0.73 Shew_2822 polynucleotide phosphorylase/polyadenylase (RefSeq) — —
Shewanella amazonensis SB2B 0.52 Sama_0778 tRNA nucleotidyltransferase (CCA-adding enzyme) (RefSeq) 0.73 Sama_0966 polynucleotide phosphorylase/polyadenylase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_0058 poly(A) polymerase 0.66 B158DRAFT_0104 polyribonucleotide nucleotidyltransferase — —
Marinobacter adhaerens HP15 0.46 HP15_326 polyA polymerase 0.63 HP15_3063 polynucleotide phosphorylase/polyadenylase — —
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_03875 pcnB tRNA nucleotidyltransferase/poly(A) polymerase 0.62 OKGIIK_05870 pnp polyribonucleotide nucleotidyltransferase — —
Rhodanobacter denitrificans MT42 0.45 LRK55_RS14820 polynucleotide adenylyltransferase PcnB 0.62 LRK55_RS00800 polyribonucleotide nucleotidyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS15105 polynucleotide adenylyltransferase PcnB 0.62 LRK54_RS01025 polyribonucleotide nucleotidyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS00805 polynucleotide adenylyltransferase PcnB 0.62 ABZR86_RS06005 polyribonucleotide nucleotidyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.3054.1 Poly(A) polymerase (EC 2.7.7.19) 0.62 Xcc-8004.2006.1 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) — —
Pseudomonas sp. S08-1 0.43 OH686_17255 Poly(A) polymerase 0.62 OH686_17165 polyribonucleotide nucleotidyltransferase low > 80
Lysobacter sp. OAE881 0.43 ABIE51_RS08015 polynucleotide adenylyltransferase PcnB 0.60 ABIE51_RS08415 polyribonucleotide nucleotidyltransferase — —
Pseudomonas putida KT2440 0.42 PP_4697 poly(A) polymerase 0.61 PP_4708 Polyribonucleotide nucleotidyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_0830 Poly(A) polymerase 0.61 Psyr_4176 Polyribonucleotide nucleotidyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_0830 Poly(A) polymerase 0.61 Psyr_4176 Polyribonucleotide nucleotidyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_2856 Poly(A) polymerase (EC 2.7.7.19) 0.61 Pf1N1B4_1156 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) — —
Pseudomonas simiae WCS417 0.41 PS417_23900 poly(A) polymerase 0.59 PS417_23950 polynucleotide phosphorylase/polyadenylase low > 88
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.59 PFLU_RS25790 polyribonucleotide nucleotidyltransferase low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.59 PFLU_RS25790 polyribonucleotide nucleotidyltransferase low > 109
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_14395 poly(A) polymerase 0.61 AO353_05540 polyribonucleotide nucleotidyltransferase — —
Pseudomonas sp. RS175 0.41 PFR28_03719 Poly(A) polymerase I 0.61 PFR28_00094 Polyribonucleotide nucleotidyltransferase — —
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_1523 Poly(A) polymerase (EC 2.7.7.19) 0.61 PfGW456L13_5084 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) — —
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_16070 poly(A) polymerase 0.61 AO356_07390 polyribonucleotide nucleotidyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_5155 Poly(A) polymerase (EC 2.7.7.19) 0.61 Pf6N2E2_3349 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) low > 103
Pseudomonas stutzeri RCH2 0.40 Psest_0998 poly(A) polymerase 0.61 Psest_0986 polyribonucleotide nucleotidyltransferase — —
Castellaniella sp019104865 MT123 0.37 ABCV34_RS08810 polynucleotide adenylyltransferase PcnB 0.62 ABCV34_RS01240 polyribonucleotide nucleotidyltransferase — —
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS00935 polynucleotide adenylyltransferase PcnB 0.61 ABZR87_RS14910 polyribonucleotide nucleotidyltransferase low > 80
Ralstonia solanacearum PSI07 0.36 RPSI07_RS12000 polynucleotide adenylyltransferase PcnB 0.61 RPSI07_RS14305 polyribonucleotide nucleotidyltransferase low > 81
Dechlorosoma suillum PS 0.36 Dsui_1515 poly(A) polymerase 0.66 Dsui_2718 polyribonucleotide nucleotidyltransferase low > 51
Variovorax sp. SCN45 0.33 GFF3943 Poly(A) polymerase (EC 2.7.7.19) 0.65 GFF4746 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) — —
Variovorax sp. OAS795 0.33 ABID97_RS08710 polynucleotide adenylyltransferase PcnB 0.64 ABID97_RS20520 polyribonucleotide nucleotidyltransferase 0.62 22
Acidovorax sp. GW101-3H11 0.32 Ac3H11_1313 Poly(A) polymerase (EC 2.7.7.19) 0.64 Ac3H11_1456 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) — —
Acinetobacter radioresistens SK82 0.29 MPMX26_00543 Poly(A) polymerase I 0.59 MPMX26_00275 Polyribonucleotide nucleotidyltransferase low > 36

Not shown: 0 genomes with orthologs for JDDGAC_13950 only; 42 genomes with orthologs for JDDGAC_21765 only