Conservation of cofitness between IAI47_14515 and IAI47_02835 in Pantoea sp. MT58

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_14515 multidrug efflux RND transporter permease subunit 1.0 IAI47_02835 DnaA initiator-associating protein DiaA 0.51 11
Erwinia tracheiphila SCR3 0.87 LU632_RS18185 efflux RND transporter permease subunit 0.93 LU632_RS02215 diaA DnaA initiator-associating protein DiaA — —
Rahnella sp. WP5 0.82 EX31_RS22470 multidrug efflux RND transporter permease subunit 0.92 EX31_RS12535 DnaA initiator-associating protein DiaA low > 89
Enterobacter asburiae PDN3 0.82 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.95 EX28DRAFT_3198 Phosphoheptose isomerase low > 76
Klebsiella michiganensis M5al 0.82 BWI76_RS06775 multidrug efflux RND transporter permease subunit 0.93 BWI76_RS24925 DnaA initiator-associating protein DiaA low > 92
Enterobacter sp. TBS_079 0.81 MPMX20_01064 Multidrug efflux pump subunit AcrB 0.95 MPMX20_04053 DnaA initiator-associating protein DiaA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF4379 RND efflux system, inner membrane transporter CmeB 0.93 GFF1518 Phosphoheptose isomerase (EC 5.3.1.-) low > 78
Escherichia coli ECRC62 0.80 BNILDI_22555 acrB efflux RND transporter permease AcrB 0.95 BNILDI_01510 diaA DnaA initiator-associating protein DiaA — —
Escherichia fergusonii Becca 0.80 EFB2_03596 Multidrug efflux pump subunit AcrB 0.96 EFB2_00674 DnaA initiator-associating protein DiaA low > 86
Escherichia coli ECOR38 0.80 HEPCGN_06820 acrB efflux RND transporter permease AcrB 0.95 HEPCGN_17095 diaA DnaA initiator-associating protein DiaA low > 85
Escherichia coli BL21 0.80 ECD_00413 multidrug efflux system protein 0.96 ECD_03016 DnaA initiator-associating factor for replication initiation low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_03212 Multidrug efflux pump subunit AcrB 0.96 OHPLBJKB_00551 DnaA initiator-associating protein DiaA low > 73
Escherichia coli ECOR27 0.80 NOLOHH_01140 acrB efflux RND transporter permease AcrB 0.95 NOLOHH_10020 diaA DnaA initiator-associating protein DiaA low > 57
Escherichia coli BW25113 0.80 b0462 acrB multidrug efflux system protein (NCBI) 0.96 b3149 yraO DnaA initiator-associating factor for replication initiation (NCBI) low > 76
Escherichia coli Nissle 1917 0.80 ECOLIN_RS02750 efflux RND transporter permease AcrB 0.96 ECOLIN_RS18100 DnaA initiator-associating protein DiaA low > 52
Escherichia coli ECRC102 0.80 NIAGMN_06260 acrB efflux RND transporter permease AcrB 0.95 NIAGMN_15980 diaA DnaA initiator-associating protein DiaA — —
Escherichia coli ECRC99 0.80 KEDOAH_19760 acrB efflux RND transporter permease AcrB 0.95 KEDOAH_09930 diaA DnaA initiator-associating protein DiaA — —
Escherichia coli ECRC101 0.80 OKFHMN_08205 acrB efflux RND transporter permease AcrB 0.95 OKFHMN_18220 diaA DnaA initiator-associating protein DiaA — —
Escherichia coli ECRC101 0.80 MCAODC_27430 acrB efflux RND transporter permease AcrB 0.95 MCAODC_08740 diaA DnaA initiator-associating protein DiaA — —
Dickeya dadantii 3937 0.79 DDA3937_RS05735 multidrug efflux RND transporter permease subunit 0.92 DDA3937_RS01700 DnaA initiator-associating protein DiaA low > 74
Serratia liquefaciens MT49 0.78 IAI46_05185 multidrug efflux RND transporter permease subunit SdeY 0.94 IAI46_22310 DnaA initiator-associating protein DiaA low > 86
Dickeya dianthicola ME23 0.77 DZA65_RS06115 multidrug efflux RND transporter permease subunit 0.92 DZA65_RS01670 DnaA initiator-associating protein DiaA low > 75
Dickeya dianthicola 67-19 0.77 HGI48_RS05790 multidrug efflux RND transporter permease subunit 0.92 HGI48_RS01595 DnaA initiator-associating protein DiaA low > 71
Pectobacterium carotovorum WPP14 0.77 HER17_RS15740 multidrug efflux RND transporter permease subunit 0.91 HER17_RS19875 DnaA initiator-associating protein DiaA low > 75
Pseudomonas sp. S08-1 0.69 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) 0.57 OH686_08360 phosphoheptose isomerase — —
Escherichia coli ECRC98 0.69 JDDGAC_19905 mdtF multidrug efflux pump RND permease MdtF 0.95 JDDGAC_21845 diaA DnaA initiator-associating protein DiaA — —
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_2824 RND efflux system, inner membrane transporter CmeB 0.57 Pf6N2E2_5343 Phosphoheptose isomerase (EC 5.3.1.-) — —
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_04880 multidrug transporter 0.57 AO356_17095 phosphoheptose isomerase — —
Pseudomonas sp. RS175 0.68 PFR28_00631 putative efflux pump membrane transporter TtgB 0.57 PFR28_03600 Phosphoheptose isomerase — —
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_17295 multidrug transporter 0.57 AO353_15275 phosphoheptose isomerase — —
Pseudomonas putida KT2440 0.68 PP_1385 Probable efflux pump membrane transporter TtgB 0.57 PP_1323 factor modulating bacterial replication archosome assembly — —
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_3246 RND efflux system, inner membrane transporter CmeB 0.57 Pf1N1B4_956 Phosphoheptose isomerase (EC 5.3.1.-) — —
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 0.57 Psyr_4115 phosphoheptose isomerase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 0.57 Psyr_4115 phosphoheptose isomerase — —
Pseudomonas simiae WCS417 0.68 PS417_06770 multidrug transporter 0.57 PS417_04575 DnaA initiator-associating protein DiaA — —
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_4581 RND efflux system, inner membrane transporter CmeB 0.57 PfGW456L13_1640 Phosphoheptose isomerase (EC 5.3.1.-) — —
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS16170 multidrug efflux RND transporter permease subunit 0.48 BPHYT_RS01950 phosphoheptose isomerase — —
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS02525 efflux RND transporter permease subunit 0.46 QEN71_RS00665 phosphoheptose isomerase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_04170 multidrug efflux pump 0.51 H281DRAFT_02150 phosphoheptose isomerase low > 103
Paraburkholderia graminis OAS925 0.66 ABIE53_003408 multidrug efflux pump 0.51 ABIE53_000472 D-sedoheptulose 7-phosphate isomerase low > 113
Pseudomonas fluorescens SBW25 0.66 PFLU_RS06805 efflux RND transporter permease subunit 0.57 PFLU_RS04640 phosphoheptose isomerase — —
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS06805 efflux RND transporter permease subunit 0.57 PFLU_RS04640 phosphoheptose isomerase — —
Shewanella oneidensis MR-1 0.66 SO4692 AcrB/AcrD/AcrF family protein (NCBI ptt file) 0.66 SO0298 gmhA phosphoheptose isomerase (NCBI ptt file) 0.41 23
Shewanella sp. ANA-3 0.66 Shewana3_4045 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) 0.66 Shewana3_3882 phosphoheptose isomerase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.66 Sama_3554 AcrB/AcrD/AcrF family protein (RefSeq) 0.67 Sama_3356 phosphoheptose isomerase (RefSeq) — —
Pseudomonas stutzeri RCH2 0.65 Psest_0310 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.58 Psest_3273 Phosphoheptose isomerase — —
Shewanella loihica PV-4 0.65 Shew_0032 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) 0.66 Shew_0225 phosphoheptose isomerase (RefSeq) low > 60
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS32420 multidrug efflux RND transporter permease subunit 0.50 RR42_RS19730 phosphoheptose isomerase — —
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS06815 multidrug transporter 0.47 HSERO_RS23360 phosphoheptose isomerase — —
Dyella japonica UNC79MFTsu3.2 0.62 ABZR86_RS18285 efflux RND transporter permease subunit 0.41 ABZR86_RS18770 SIS domain-containing protein low > 74
Alteromonas macleodii MIT1002 0.57 MIT1002_00135 Multidrug-efflux transporter MexB 0.65 MIT1002_03117 DnaA initiator-associating protein DiaA low > 70
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF3840 RND efflux system, inner membrane transporter CmeB 0.36 GFF2717 Phosphoheptose isomerase (EC 5.3.1.-) — —
Variovorax sp. OAS795 0.52 ABID97_RS00325 efflux RND transporter permease subunit 0.33 ABID97_RS00275 SIS domain-containing protein low > 91
Acidovorax sp. GW101-3H11 0.52 Ac3H11_4448 RND efflux system, inner membrane transporter CmeB 0.40 Ac3H11_4468 Phosphoheptose isomerase (EC 5.3.1.-) — —
Castellaniella sp019104865 MT123 0.48 ABCV34_RS04225 efflux RND transporter permease subunit 0.41 ABCV34_RS14310 phosphoheptose isomerase — —
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS02100 multidrug efflux RND transporter permease subunit 0.41 LRK54_RS05630 D-sedoheptulose 7-phosphate isomerase low > 59
Kangiella aquimarina DSM 16071 0.46 B158DRAFT_0733 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.66 B158DRAFT_2106 Phosphoheptose isomerase low > 40
Marinobacter adhaerens HP15 0.38 HP15_933 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 0.32 HP15_550 phosphoheptose isomerase low > 73

Not shown: 26 genomes with orthologs for IAI47_14515 only; 5 genomes with orthologs for IAI47_02835 only