Conservation of cofitness between IAI46_03910 and IAI46_24855 in Serratia liquefaciens MT49

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_03910 inner membrane protein YpjD 1.0 IAI46_24855 YicC family protein 0.52 16
Rahnella sp. WP5 0.81 EX31_RS07735 inner membrane protein YpjD 0.89 EX31_RS14510 YicC family protein low > 89
Pectobacterium carotovorum WPP14 0.81 HER17_RS05105 inner membrane protein YpjD 0.90 HER17_RS20905 YicC family protein low > 75
Escherichia coli ECOR27 0.76 NOLOHH_12840 ypjD Inner membrane protein YpjD 0.87 NOLOHH_07465 yicC UPF0701 protein YicC low > 57
Escherichia coli ECRC99 0.76 KEDOAH_07055 ypjD Inner membrane protein YpjD 0.87 KEDOAH_12560 yicC UPF0701 protein YicC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_01095 Inner membrane protein YpjD 0.87 OHPLBJKB_00058 hypothetical protein low > 73
Escherichia coli ECRC102 0.76 NIAGMN_18935 ypjD Inner membrane protein YpjD 0.87 NIAGMN_13345 yicC UPF0701 protein YicC — —
Escherichia coli ECRC62 0.76 BNILDI_11645 ypjD Inner membrane protein YpjD 0.87 BNILDI_04050 yicC UPF0701 protein YicC — —
Escherichia coli ECOR38 0.76 HEPCGN_20285 ypjD Inner membrane protein YpjD 0.87 HEPCGN_14405 yicC UPF0701 protein YicC 0.85 67
Escherichia coli ECRC101 0.76 OKFHMN_21165 ypjD Inner membrane protein YpjD 0.87 OKFHMN_15585 yicC UPF0701 protein YicC — —
Escherichia coli ECRC98 0.76 JDDGAC_24830 ypjD Inner membrane protein YpjD 0.87 JDDGAC_19210 yicC UPF0701 protein YicC — —
Escherichia coli BL21 0.76 ECD_02500 cytochrome c assembly protein family inner membrane protein 0.87 ECD_03501 UPF0701 family protein low > 60
Escherichia coli ECRC101 0.76 MCAODC_11695 ypjD Inner membrane protein YpjD 0.87 MCAODC_06095 yicC UPF0701 protein YicC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF4167 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.87 GFF365 Protein YicC low > 78
Escherichia coli BW25113 0.76 b2611 ypjD predicted inner membrane protein (RefSeq) 0.87 b3644 yicC hypothetical protein (NCBI) low > 76
Klebsiella michiganensis M5al 0.76 BWI76_RS21535 inner membrane protein YpjD 0.90 BWI76_RS27395 hypothetical protein low > 92
Escherichia coli Nissle 1917 0.76 ECOLIN_RS14755 inner membrane protein YpjD 0.87 ECOLIN_RS20760 YicC/YloC family endoribonuclease low > 52
Escherichia fergusonii Becca 0.76 EFB2_01281 Inner membrane protein YpjD 0.87 EFB2_00169 hypothetical protein low > 86
Pantoea sp. MT58 0.76 IAI47_04365 inner membrane protein YpjD 0.90 IAI47_00580 YicC family protein low > 76
Dickeya dianthicola 67-19 0.74 HGI48_RS16295 inner membrane protein YpjD 0.88 HGI48_RS00540 YicC family protein low > 71
Dickeya dadantii 3937 0.74 DDA3937_RS16185 inner membrane protein YpjD 0.88 DDA3937_RS20645 YicC family protein low > 74
Dickeya dianthicola ME23 0.74 DZA65_RS17390 inner membrane protein YpjD 0.88 DZA65_RS00575 YicC family protein low > 75
Enterobacter asburiae PDN3 0.73 EX28DRAFT_2714 ABC-type uncharacterized transport system, permease component 0.87 EX28DRAFT_3894 TIGR00255 family protein low > 76
Enterobacter sp. TBS_079 0.73 MPMX20_03481 Inner membrane protein YpjD 0.89 MPMX20_00091 hypothetical protein low > 85
Erwinia tracheiphila SCR3 0.73 LU632_RS15675 inner membrane protein YpjD 0.83 LU632_RS22050 YicC family protein low > 74
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_02985 inner membrane protein YpjD 0.70 CSW01_01110 YicC family protein low > 62
Shewanella amazonensis SB2B 0.38 Sama_0887 hypothetical protein (RefSeq) 0.64 Sama_0319 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.37 Shewana3_3019 cytochrome c assembly protein (RefSeq) 0.64 Shewana3_3778 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.36 SO1355 membrane protein, putative (NCBI ptt file) 0.65 SO4257 conserved hypothetical protein TIGR00255 (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.35 Shew_1061 cytochrome c assembly protein (RefSeq) 0.67 Shew_3489 hypothetical protein (RefSeq) — —
Alteromonas macleodii MIT1002 0.33 MIT1002_01295 Inner membrane protein YpjD 0.68 MIT1002_04072 hypothetical protein low > 70
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_04395 cytochrome C assembly protein 0.45 AO353_09265 hypothetical protein — —
Pseudomonas sp. RS175 0.22 PFR28_00325 Inner membrane protein YpjD 0.45 PFR28_04421 hypothetical protein — —
Pseudomonas sp. S08-1 0.22 OH686_17715 Inner membrane protein YpjD 0.45 OH686_13565 UPF0701 protein YicC low > 80
Pseudomonas putida KT2440 0.22 PP_1460 putative Membrane protein 0.46 PP_5295 conserved protein of unknown function low > 96
Pseudomonas simiae WCS417 0.22 PS417_22930 cytochrome C assembly protein 0.46 PS417_27815 hypothetical protein — —
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_1714 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.45 PfGW456L13_783 Protein YicC low > 87
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS24590 cytochrome c assembly protein 0.45 PFLU_RS29495 YicC family protein low > 109
Pseudomonas fluorescens SBW25 0.21 PFLU_RS24590 cytochrome c assembly protein 0.45 PFLU_RS29495 YicC family protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_3151 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.45 Pf6N2E2_4364 Protein YicC low > 103
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_06415 cytochrome C assembly protein 0.45 AO356_12495 hypothetical protein low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_1280 Cytochrome c assembly protein 0.45 Psyr_0212 Conserved hypothetical protein 255 low > 86
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_1280 Cytochrome c assembly protein 0.45 Psyr_0212 Conserved hypothetical protein 255 low > 86
Pseudomonas stutzeri RCH2 0.21 Psest_3135 ABC-type uncharacterized transport system, permease component 0.46 Psest_3814 TIGR00255 family protein — —
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_875 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.45 Pf1N1B4_2116 Protein YicC — —
Marinobacter adhaerens HP15 0.18 HP15_756 cytochrome c assembly protein 0.47 HP15_301 conserved hypothetical protein low > 73
Rhodanobacter sp. FW510-T8 0.18 OKGIIK_09575 ypjD Cytochrome C assembly protein 0.42 OKGIIK_12145 yicC YicC-like family, N-terminal region — —
Castellaniella sp019104865 MT123 0.16 ABCV34_RS09015 cytochrome c biogenesis protein CcsA 0.27 ABCV34_RS03510 DUF1732 domain-containing protein — —
Xanthomonas campestris pv. campestris strain 8004 0.15 Xcc-8004.3775.1 FIG001154: CcsA-related protein 0.41 Xcc-8004.1220.1 Protein YicC low > 74
Rhodanobacter denitrificans MT42 0.13 LRK55_RS02275 cytochrome c biogenesis protein CcsA 0.41 LRK55_RS11475 YicC family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.13 LRK54_RS02520 cytochrome c biogenesis protein CcsA 0.41 LRK54_RS11750 YicC family protein low > 59
Lysobacter sp. OAE881 0.13 ABIE51_RS07730 cytochrome c biogenesis protein CcsA 0.46 ABIE51_RS17280 YicC/YloC family endoribonuclease low > 62
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS08835 cytochrome c biogenesis protein CcsA 0.42 ABZR86_RS11895 YicC/YloC family endoribonuclease — —
Ralstonia solanacearum GMI1000 0.12 RS_RS14050 inner membrane protein YpjD 0.33 RS_RS10815 YicC family protein — —
Ralstonia solanacearum IBSBF1503 0.11 RALBFv3_RS06100 ABC transporter permease 0.33 RALBFv3_RS03330 YicC family protein low > 76
Ralstonia solanacearum UW163 0.11 UW163_RS07525 ABC transporter permease 0.33 UW163_RS10390 YicC family protein — —

Not shown: 1 genomes with orthologs for IAI46_03910 only; 41 genomes with orthologs for IAI46_24855 only