Conservation of cofitness between IAI46_03910 and IAI46_21215 in Serratia liquefaciens MT49

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_03910 inner membrane protein YpjD 1.0 IAI46_21215 tRNA glutamyl-Q(34) synthetase GluQRS 0.53 11
Rahnella sp. WP5 0.81 EX31_RS07735 inner membrane protein YpjD 0.70 EX31_RS03255 tRNA glutamyl-Q(34) synthetase GluQRS low > 89
Pectobacterium carotovorum WPP14 0.81 HER17_RS05105 inner membrane protein YpjD 0.72 HER17_RS05575 tRNA glutamyl-Q(34) synthetase GluQRS low > 75
Escherichia coli ECRC62 0.76 BNILDI_11645 ypjD Inner membrane protein YpjD 0.67 BNILDI_08975 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS — —
Escherichia coli ECRC99 0.76 KEDOAH_07055 ypjD Inner membrane protein YpjD 0.67 KEDOAH_17805 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS — —
Escherichia coli BL21 0.76 ECD_02500 cytochrome c assembly protein family inner membrane protein 0.67 ECD_00143 glutamyl-Q tRNA(Asp) synthetase low > 60
Escherichia coli ECRC101 0.76 OKFHMN_21165 ypjD Inner membrane protein YpjD 0.67 OKFHMN_10350 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS — —
Escherichia coli ECOR38 0.76 HEPCGN_20285 ypjD Inner membrane protein YpjD 0.66 HEPCGN_08300 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_01095 Inner membrane protein YpjD 0.67 OHPLBJKB_03518 Glutamyl-Q tRNA(Asp) synthetase low > 73
Escherichia coli ECOR27 0.76 NOLOHH_12840 ypjD Inner membrane protein YpjD 0.67 NOLOHH_02695 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 57
Escherichia coli ECRC101 0.76 MCAODC_11695 ypjD Inner membrane protein YpjD 0.67 MCAODC_00865 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS — —
Escherichia coli ECRC102 0.76 NIAGMN_18935 ypjD Inner membrane protein YpjD 0.67 NIAGMN_08200 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS — —
Escherichia coli ECRC98 0.76 JDDGAC_24830 ypjD Inner membrane protein YpjD 0.67 JDDGAC_13945 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS — —
Escherichia coli Nissle 1917 0.76 ECOLIN_RS14755 inner membrane protein YpjD 0.67 ECOLIN_RS00795 tRNA glutamyl-Q(34) synthetase GluQRS low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF4167 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.68 GFF88 glutamyl-Q-tRNA synthetase low > 78
Escherichia coli BW25113 0.76 b2611 ypjD predicted inner membrane protein (RefSeq) 0.67 b0144 yadB glutamyl-Q tRNA(Asp) synthetase (RefSeq) low > 76
Klebsiella michiganensis M5al 0.76 BWI76_RS21535 inner membrane protein YpjD 0.65 BWI76_RS05010 tRNA glutamyl-Q synthetase low > 92
Escherichia fergusonii Becca 0.76 EFB2_01281 Inner membrane protein YpjD 0.67 EFB2_03900 Glutamyl-Q tRNA(Asp) synthetase low > 86
Pantoea sp. MT58 0.76 IAI47_04365 inner membrane protein YpjD 0.65 IAI47_15640 tRNA glutamyl-Q(34) synthetase GluQRS low > 76
Dickeya dadantii 3937 0.74 DDA3937_RS16185 inner membrane protein YpjD 0.70 DDA3937_RS15940 tRNA glutamyl-Q(34) synthetase GluQRS low > 74
Dickeya dianthicola ME23 0.74 DZA65_RS17390 inner membrane protein YpjD 0.70 DZA65_RS17140 tRNA glutamyl-Q(34) synthetase GluQRS low > 75
Dickeya dianthicola 67-19 0.74 HGI48_RS16295 inner membrane protein YpjD 0.71 HGI48_RS16055 tRNA glutamyl-Q(34) synthetase GluQRS low > 71
Enterobacter sp. TBS_079 0.73 MPMX20_03481 Inner membrane protein YpjD 0.69 MPMX20_00830 Glutamyl-Q tRNA(Asp) synthetase low > 85
Enterobacter asburiae PDN3 0.73 EX28DRAFT_2714 ABC-type uncharacterized transport system, permease component 0.67 EX28DRAFT_3733 glutamyl-queuosine tRNA(Asp) synthetase low > 76
Erwinia tracheiphila SCR3 0.73 LU632_RS15675 inner membrane protein YpjD 0.64 LU632_RS20085 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 74
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_02985 inner membrane protein YpjD 0.52 CSW01_03150 tRNA glutamyl-Q(34) synthetase GluQRS low > 62
Shewanella amazonensis SB2B 0.38 Sama_0887 hypothetical protein (RefSeq) 0.53 Sama_0779 glutamyl-tRNA synthetase domain-containing protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.37 Shewana3_3019 cytochrome c assembly protein (RefSeq) 0.49 Shewana3_3405 glutamyl-tRNA synthetase, class Ic (RefSeq) low > 73
Shewanella oneidensis MR-1 0.36 SO1355 membrane protein, putative (NCBI ptt file) 0.49 SO0873 glutamyl-tRNA synthetase domain protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.35 Shew_1061 cytochrome c assembly protein (RefSeq) 0.50 Shew_3130 glutamate--tRNA ligase (RefSeq) — —
Alteromonas macleodii MIT1002 0.33 MIT1002_01295 Inner membrane protein YpjD 0.43 MIT1002_03691 Glutamyl-Q tRNA(Asp) synthetase low > 70
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_04395 cytochrome C assembly protein 0.41 AO353_14415 glutamyl-Q tRNA(Asp) ligase — —
Pseudomonas sp. RS175 0.22 PFR28_00325 Inner membrane protein YpjD 0.41 PFR28_03715 Glutamyl-Q tRNA(Asp) synthetase low > 88
Pseudomonas sp. S08-1 0.22 OH686_17715 Inner membrane protein YpjD 0.45 OH686_17275 glutamyl-queuosine tRNA(Asp) synthetase low > 80
Pseudomonas putida KT2440 0.22 PP_1460 putative Membrane protein 0.43 PP_4694 Glutamyl-Q tRNA(Asp) synthetase low > 96
Pseudomonas simiae WCS417 0.22 PS417_22930 cytochrome C assembly protein 0.42 PS417_23880 glutamyl-Q tRNA(Asp) ligase — —
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_1714 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.42 PfGW456L13_1527 glutamyl-Q-tRNA synthetase low > 87
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS24590 cytochrome c assembly protein 0.41 PFLU_RS25720 tRNA glutamyl-Q(34) synthetase GluQRS 0.28 58
Pseudomonas fluorescens SBW25 0.21 PFLU_RS24590 cytochrome c assembly protein 0.41 PFLU_RS25720 tRNA glutamyl-Q(34) synthetase GluQRS low > 109
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_06415 cytochrome C assembly protein 0.43 AO356_16090 glutamyl-Q tRNA(Asp) ligase low > 104
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_3151 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.43 Pf6N2E2_5159 glutamyl-Q-tRNA synthetase 0.40 36
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_1280 Cytochrome c assembly protein 0.45 Psyr_0834 Glutamyl-tRNA synthetase, class Ic low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_1280 Cytochrome c assembly protein 0.45 Psyr_0834 Glutamyl-tRNA synthetase, class Ic low > 86
Pseudomonas stutzeri RCH2 0.21 Psest_3135 ABC-type uncharacterized transport system, permease component 0.42 Psest_1002 glutamyl-queuosine tRNA(Asp) synthetase — —
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_875 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.42 Pf1N1B4_2861 glutamyl-Q-tRNA synthetase low > 87
Acinetobacter radioresistens SK82 0.20 MPMX26_02469 Inner membrane protein YpjD 0.41 MPMX26_00176 Glutamyl-Q tRNA(Asp) synthetase low > 36
Marinobacter adhaerens HP15 0.18 HP15_756 cytochrome c assembly protein 0.34 HP15_331 glutamyl-Q tRNA(Asp) synthetase low > 73
Rhodanobacter sp. FW510-T8 0.18 OKGIIK_09575 ypjD Cytochrome C assembly protein 0.37 OKGIIK_03640 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 52
Castellaniella sp019104865 MT123 0.16 ABCV34_RS09015 cytochrome c biogenesis protein CcsA 0.34 ABCV34_RS12295 glutamyl-Q tRNA(Asp) synthetase — —
Xanthomonas campestris pv. campestris strain 8004 0.15 Xcc-8004.3775.1 FIG001154: CcsA-related protein 0.36 Xcc-8004.2261.1 glutamyl-Q-tRNA synthetase low > 74
Rhodanobacter denitrificans FW104-10B01 0.13 LRK54_RS02520 cytochrome c biogenesis protein CcsA 0.36 LRK54_RS14820 tRNA glutamyl-Q(34) synthetase GluQRS low > 59
Rhodanobacter denitrificans MT42 0.13 LRK55_RS02275 cytochrome c biogenesis protein CcsA 0.36 LRK55_RS14535 tRNA glutamyl-Q(34) synthetase GluQRS low > 63
Lysobacter sp. OAE881 0.13 ABIE51_RS07730 cytochrome c biogenesis protein CcsA 0.40 ABIE51_RS13520 tRNA glutamyl-Q(34) synthetase GluQRS low > 62
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS08835 cytochrome c biogenesis protein CcsA 0.38 ABZR86_RS00575 tRNA glutamyl-Q(34) synthetase GluQRS — —
Ralstonia solanacearum GMI1000 0.12 RS_RS14050 inner membrane protein YpjD 0.29 RS_RS11090 tRNA glutamyl-Q(34) synthetase GluQRS low > 80
Ralstonia solanacearum UW163 0.11 UW163_RS07525 ABC transporter permease 0.30 UW163_RS10025 tRNA glutamyl-Q(34) synthetase GluQRS — —
Ralstonia solanacearum IBSBF1503 0.11 RALBFv3_RS06100 ABC transporter permease 0.30 RALBFv3_RS03645 tRNA glutamyl-Q(34) synthetase GluQRS low > 76

Not shown: 0 genomes with orthologs for IAI46_03910 only; 15 genomes with orthologs for IAI46_21215 only