Conservation of cofitness between IAI46_03910 and IAI46_01880 in Serratia liquefaciens MT49

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_03910 inner membrane protein YpjD 1.0 IAI46_01880 transcription elongation factor GreA 0.53 12
Rahnella sp. WP5 0.81 EX31_RS07735 inner membrane protein YpjD 0.89 EX31_RS08595 transcription elongation factor GreA low > 89
Pectobacterium carotovorum WPP14 0.81 HER17_RS05105 inner membrane protein YpjD 0.88 HER17_RS18330 transcription elongation factor GreA — —
Escherichia coli ECRC101 0.76 MCAODC_11695 ypjD Inner membrane protein YpjD 0.88 MCAODC_08565 greA transcription elongation factor GreA — —
Escherichia coli ECRC102 0.76 NIAGMN_18935 ypjD Inner membrane protein YpjD 0.88 NIAGMN_15805 greA transcription elongation factor GreA — —
Escherichia coli ECRC62 0.76 BNILDI_11645 ypjD Inner membrane protein YpjD 0.88 BNILDI_01690 greA transcription elongation factor GreA — —
Escherichia coli ECOR27 0.76 NOLOHH_12840 ypjD Inner membrane protein YpjD 0.88 NOLOHH_09845 greA transcription elongation factor GreA — —
Escherichia coli ECRC99 0.76 KEDOAH_07055 ypjD Inner membrane protein YpjD 0.88 KEDOAH_10105 greA transcription elongation factor GreA — —
Escherichia coli BL21 0.76 ECD_02500 cytochrome c assembly protein family inner membrane protein 0.88 ECD_03046 transcript cleavage factor low > 60
Escherichia coli ECOR38 0.76 HEPCGN_20285 ypjD Inner membrane protein YpjD 0.88 HEPCGN_16920 greA transcription elongation factor GreA — —
Escherichia coli ECRC101 0.76 OKFHMN_21165 ypjD Inner membrane protein YpjD 0.88 OKFHMN_18045 greA transcription elongation factor GreA — —
Escherichia coli ECRC98 0.76 JDDGAC_24830 ypjD Inner membrane protein YpjD 0.88 JDDGAC_21670 greA transcription elongation factor GreA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_01095 Inner membrane protein YpjD 0.88 OHPLBJKB_00519 Transcription elongation factor GreA low > 73
Klebsiella michiganensis M5al 0.76 BWI76_RS21535 inner membrane protein YpjD 0.89 BWI76_RS25160 transcription elongation factor GreA low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF4167 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.89 GFF2922 Transcription elongation factor GreA low > 78
Escherichia coli BW25113 0.76 b2611 ypjD predicted inner membrane protein (RefSeq) 0.88 b3181 greA transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) low > 76
Escherichia coli Nissle 1917 0.76 ECOLIN_RS14755 inner membrane protein YpjD 0.88 ECOLIN_RS18320 transcription elongation factor GreA — —
Escherichia fergusonii Becca 0.76 EFB2_01281 Inner membrane protein YpjD 0.88 EFB2_00642 Transcription elongation factor GreA low > 86
Pantoea sp. MT58 0.76 IAI47_04365 inner membrane protein YpjD 0.86 IAI47_17080 transcription elongation factor GreA low > 76
Dickeya dianthicola ME23 0.74 DZA65_RS17390 inner membrane protein YpjD 0.86 DZA65_RS03180 transcription elongation factor GreA low > 75
Dickeya dianthicola 67-19 0.74 HGI48_RS16295 inner membrane protein YpjD 0.86 HGI48_RS03185 transcription elongation factor GreA low > 71
Dickeya dadantii 3937 0.74 DDA3937_RS16185 inner membrane protein YpjD 0.87 DDA3937_RS03015 transcription elongation factor GreA — —
Enterobacter sp. TBS_079 0.73 MPMX20_03481 Inner membrane protein YpjD 0.88 MPMX20_04085 Transcription elongation factor GreA low > 85
Enterobacter asburiae PDN3 0.73 EX28DRAFT_2714 ABC-type uncharacterized transport system, permease component 0.88 EX28DRAFT_3232 transcription elongation factor GreA low > 76
Erwinia tracheiphila SCR3 0.73 LU632_RS15675 inner membrane protein YpjD 0.79 LU632_RS21165 greA transcription elongation factor GreA low > 74
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_02985 inner membrane protein YpjD 0.58 CSW01_03330 transcription elongation factor GreA low > 62
Shewanella amazonensis SB2B 0.38 Sama_0887 hypothetical protein (RefSeq) 0.70 Sama_0951 GreA/GreB family elongation factor (RefSeq) low > 62
Shewanella sp. ANA-3 0.37 Shewana3_3019 cytochrome c assembly protein (RefSeq) 0.72 Shewana3_1017 transcription elongation factor GreA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.36 SO1355 membrane protein, putative (NCBI ptt file) 0.72 SO1191 greA transcription elongation factor GreA (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.35 Shew_1061 cytochrome c assembly protein (RefSeq) 0.69 Shew_2837 transcription elongation factor GreA (RefSeq) — —
Alteromonas macleodii MIT1002 0.33 MIT1002_01295 Inner membrane protein YpjD 0.74 MIT1002_01468 Transcript cleavage factor GreA 0.78 38
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_04395 cytochrome C assembly protein 0.59 AO353_05625 transcription elongation factor GreA — —
Pseudomonas sp. RS175 0.22 PFR28_00325 Inner membrane protein YpjD 0.56 PFR28_00078 Transcription elongation factor GreA — —
Pseudomonas sp. S08-1 0.22 OH686_17715 Inner membrane protein YpjD 0.58 OH686_17085 Transcription elongation factor GreA low > 80
Pseudomonas putida KT2440 0.22 PP_1460 putative Membrane protein 0.56 PP_4722 Transcription elongation factor GreA low > 96
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_1714 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.57 PfGW456L13_5098 Transcription elongation factor GreA — —
Pseudomonas simiae WCS417 0.22 PS417_22930 cytochrome C assembly protein 0.58 PS417_24035 transcription elongation factor GreA — —
Pseudomonas fluorescens SBW25 0.21 PFLU_RS24590 cytochrome c assembly protein 0.59 PFLU_RS25875 transcription elongation factor GreA low > 109
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS24590 cytochrome c assembly protein 0.59 PFLU_RS25875 transcription elongation factor GreA low > 109
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_3151 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.58 Pf6N2E2_3363 Transcription elongation factor GreA — —
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_06415 cytochrome C assembly protein 0.57 AO356_07475 transcription elongation factor GreA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_1280 Cytochrome c assembly protein 0.60 Psyr_4190 transcription elongation factor GreA — —
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_1280 Cytochrome c assembly protein 0.60 Psyr_4190 transcription elongation factor GreA — —
Pseudomonas stutzeri RCH2 0.21 Psest_3135 ABC-type uncharacterized transport system, permease component 0.61 Psest_0969 transcription elongation factor GreA — —
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_875 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.59 Pf1N1B4_1171 Transcription elongation factor GreA — —
Acinetobacter radioresistens SK82 0.20 MPMX26_02469 Inner membrane protein YpjD 0.66 MPMX26_00765 Transcription elongation factor GreA low > 36
Marinobacter adhaerens HP15 0.18 HP15_756 cytochrome c assembly protein 0.64 HP15_3076 protein containing prokaryotic transcription elongation factor GreA domain low > 73
Rhodanobacter sp. FW510-T8 0.18 OKGIIK_09575 ypjD Cytochrome C assembly protein 0.50 OKGIIK_07290 greA transcription elongation factor GreA low > 52
Castellaniella sp019104865 MT123 0.16 ABCV34_RS09015 cytochrome c biogenesis protein CcsA 0.55 ABCV34_RS15540 transcription elongation factor GreA — —
Xanthomonas campestris pv. campestris strain 8004 0.15 Xcc-8004.3775.1 FIG001154: CcsA-related protein 0.59 Xcc-8004.2911.1 Transcription elongation factor GreA low > 74
Rhodanobacter denitrificans FW104-10B01 0.13 LRK54_RS02520 cytochrome c biogenesis protein CcsA 0.50 LRK54_RS18005 transcription elongation factor GreA 0.34 55
Rhodanobacter denitrificans MT42 0.13 LRK55_RS02275 cytochrome c biogenesis protein CcsA 0.50 LRK55_RS17860 transcription elongation factor GreA low > 63
Lysobacter sp. OAE881 0.13 ABIE51_RS07730 cytochrome c biogenesis protein CcsA 0.58 ABIE51_RS11610 transcription elongation factor GreA low > 62
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS08835 cytochrome c biogenesis protein CcsA 0.51 ABZR86_RS05595 transcription elongation factor GreA — —
Ralstonia solanacearum GMI1000 0.12 RS_RS14050 inner membrane protein YpjD 0.54 RS_RS07635 transcription elongation factor GreA — —
Ralstonia solanacearum UW163 0.11 UW163_RS07525 ABC transporter permease 0.55 UW163_RS15495 transcription elongation factor GreA — —
Ralstonia solanacearum IBSBF1503 0.11 RALBFv3_RS06100 ABC transporter permease 0.55 RALBFv3_RS02185 transcription elongation factor GreA low > 76

Not shown: 0 genomes with orthologs for IAI46_03910 only; 41 genomes with orthologs for IAI46_01880 only