Conservation of cofitness between HSERO_RS07610 and HSERO_RS16585 in Herbaspirillum seropedicae SmR1

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS07610 fumarate hydratase 1.0 HSERO_RS16585 iron ABC transporter permease 0.36 19
Enterobacter asburiae PDN3 0.72 EX28DRAFT_1608 fumarase, class II (EC 4.2.1.2) 0.10 EX28DRAFT_2436 ABC-type Fe3+ transport system, permease component low > 76
Enterobacter sp. TBS_079 0.72 MPMX20_02022 Fumarate hydratase class II 0.10 MPMX20_01120 hypothetical protein low > 85
Variovorax sp. SCN45 0.72 GFF479 Fumarate hydratase class II (EC 4.2.1.2) 0.24 GFF6761 Ferric iron ABC transporter, permease protein low > 127
Dickeya dianthicola ME23 0.71 DZA65_RS11125 class II fumarate hydratase 0.16 DZA65_RS17205 iron ABC transporter permease low > 75
Dickeya dadantii 3937 0.71 DDA3937_RS10655 class II fumarate hydratase 0.16 DDA3937_RS16000 iron ABC transporter permease low > 74
Rahnella sp. WP5 0.71 EX31_RS06965 class II fumarate hydratase 0.25 EX31_RS17575 iron ABC transporter permease low > 89
Dickeya dianthicola 67-19 0.71 HGI48_RS10655 class II fumarate hydratase 0.16 HGI48_RS16120 iron ABC transporter permease low > 71
Pectobacterium carotovorum WPP14 0.71 HER17_RS10755 class II fumarate hydratase 0.23 HER17_RS14370 iron ABC transporter permease low > 75
Acidovorax sp. GW101-3H11 0.71 Ac3H11_943 Fumarate hydratase class II (EC 4.2.1.2) 0.48 Ac3H11_3971 Ferric iron ABC transporter, permease protein low > 79
Variovorax sp. OAS795 0.71 ABID97_RS17545 class II fumarate hydratase 0.24 ABID97_RS21260 iron ABC transporter permease low > 91
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS14615 fumarate hydratase 0.10 BPHYT_RS23965 iron ABC transporter permease low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.70 GFF4101 Fumarate hydratase class II (EC 4.2.1.2) 0.44 GFF663 Ferric iron ABC transporter, permease protein 0.57 73
Dechlorosoma suillum PS 0.70 Dsui_0926 fumarate hydratase, class II 0.34 Dsui_2942 ABC-type Fe3+ transport system, permease component low > 51
Erwinia tracheiphila SCR3 0.69 LU632_RS12335 fumC class II fumarate hydratase 0.08 LU632_RS03340 iron ABC transporter permease low > 74
Rhodopseudomonas palustris CGA009 0.59 TX73_018130 class II fumarate hydratase 0.20 TX73_021530 iron ABC transporter permease low > 86
Azospirillum sp. SherDot2 0.59 MPMX19_01424 Fumarate hydratase class II 0.30 MPMX19_01379 hypothetical protein low > 112
Sinorhizobium meliloti 1021 0.58 SMc00149 fumarate hydratase 0.24 SMc00775 iron(III) permease
Castellaniella sp019104865 MT123 0.58 ABCV34_RS03655 class II fumarate hydratase 0.25 ABCV34_RS03550 iron ABC transporter permease
Pseudomonas simiae WCS417 0.57 PS417_19200 fumarate hydratase 0.27 PS417_27260 iron ABC transporter permease low > 88
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_3661 Fumarate hydratase, class II 0.27 Psyr_0245 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_3661 Fumarate hydratase, class II 0.27 Psyr_0245 Binding-protein-dependent transport systems inner membrane component low > 86
Phaeobacter inhibens DSM 17395 0.57 PGA1_c13520 fumarate hydratase class II 0.32 PGA1_c32540 putative Fe(3+)-transport system protein SfuB
Dinoroseobacter shibae DFL-12 0.57 Dshi_2334 fumarate hydratase, class II (RefSeq) 0.32 Dshi_2023 binding-protein-dependent transport systems inner membrane component (RefSeq)
Azospirillum brasilense Sp245 0.56 AZOBR_RS06120 fumarate hydratase 0.30 AZOBR_RS03155 iron ABC transporter permease 0.33 87
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_02150 fumarate hydratase 0.27 AO353_08740 iron ABC transporter permease low > 101
Rhizobium sp. OAE497 0.56 ABIE40_RS10540 class II fumarate hydratase 0.26 ABIE40_RS21705 iron ABC transporter permease low > 107
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_367 Fumarate hydratase class II (EC 4.2.1.2) 0.29 Pf1N1B4_2233 Ferric iron ABC transporter, permease protein low > 87
Rhodospirillum rubrum S1H 0.56 Rru_A2129 Fumarate hydratase, class II (NCBI) 0.31 Rru_A0768 Binding-protein-dependent transport systems inner membrane component (NCBI) low > 58
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_2160 Fumarate hydratase class II (EC 4.2.1.2) 0.25 PfGW456L13_901 Ferric iron ABC transporter, permease protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_2536 Fumarate hydratase class II (EC 4.2.1.2) 0.28 Pf6N2E2_4484 Ferric iron ABC transporter, permease protein low > 103
Pseudomonas sp. S08-1 0.56 OH686_21015 fumarate hydratase, class II 0.27 OH686_11180 Ferric iron ABC transporter, permease protein low > 80
Agrobacterium fabrum C58 0.56 Atu1616 fumarate hydratase 0.26 Atu0613 ABC transporter, membrane spanning protein
Pseudomonas putida KT2440 0.56 PP_1755 fumarate hydratase (class 2) 0.26 PP_5195 putative Iron ABC transporter, permease protein low > 96
Pseudomonas stutzeri RCH2 0.55 Psest_2682 fumarate hydratase, class II 0.25 Psest_0180 ABC-type Fe3+ transport system, permease component
Pseudomonas sp. RS175 0.55 PFR28_00889 Fumarate hydratase class II 0.27 PFR28_04317 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_03545 fumarate hydratase 0.28 AO356_13030 iron ABC transporter permease
Pseudomonas fluorescens SBW25 0.55 PFLU_RS21170 class II fumarate hydratase 0.28 PFLU_RS28920 iron ABC transporter permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS21170 class II fumarate hydratase 0.28 PFLU_RS28920 iron ABC transporter permease low > 109
Synechococcus elongatus PCC 7942 0.55 Synpcc7942_1007 fumC fumarate hydratase 0.32 Synpcc7942_1407 futB iron(III) ABC transporter permease protein
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS33090 fumarate hydratase 0.36 RR42_RS04345 iron ABC transporter permease low > 128
Bosea sp. OAE506 0.53 ABIE41_RS12805 class II fumarate hydratase 0.24 ABIE41_RS15165 iron ABC transporter permease
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_07895 class II fumarate hydratase 0.27 CSW01_03210 iron ABC transporter permease low > 62
Shewanella amazonensis SB2B 0.40 Sama_0822 fumarate hydratase (RefSeq) 0.27 Sama_0667 iron(III) ABC transporter, permease protein (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_1200 fumarase, class II (EC 4.2.1.2) 0.24 B158DRAFT_0541 ABC-type Fe3+ transport system, permease component
Alteromonas macleodii MIT1002 0.39 MIT1002_03167 Fumarate hydratase class II 0.11 MIT1002_00116 Spermidine/putrescine transport system permease protein PotB low > 70
Marinobacter adhaerens HP15 0.38 HP15_3132 fumarate hydratase class II 0.33 HP15_1455 iron(III) ABC transporter, permease protein low > 73
Shewanella loihica PV-4 0.38 Shew_0068 fumarate lyase (RefSeq) 0.24 Shew_0862 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 60

Not shown: 50 genomes with orthologs for HSERO_RS07610 only; 3 genomes with orthologs for HSERO_RS16585 only