Conservation of cofitness between HSERO_RS05945 and HSERO_RS16370 in Herbaspirillum seropedicae SmR1

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS05945 hypothetical protein 1.0 HSERO_RS16370 peptidyl-prolyl cis-trans isomerase 0.23 17
Ralstonia solanacearum PSI07 0.55 RPSI07_RS12675 JAB domain-containing protein 0.64 RPSI07_RS18450 peptidylprolyl isomerase low > 81
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS00330 DNA repair protein RadC 0.65 ABZR87_RS10570 peptidylprolyl isomerase low > 80
Ralstonia solanacearum GMI1000 0.55 RS_RS12270 JAB domain-containing protein 0.65 RS_RS05725 peptidylprolyl isomerase low > 80
Ralstonia solanacearum UW163 0.54 UW163_RS08960 JAB domain-containing protein 0.65 UW163_RS12380 peptidylprolyl isomerase — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS04710 JAB domain-containing protein 0.65 RALBFv3_RS14910 peptidylprolyl isomerase low > 76
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS16995 hypothetical protein 0.63 RR42_RS06275 peptidylprolyl isomerase low > 128
Dechlorosoma suillum PS 0.53 Dsui_1537 DNA repair protein radc 0.51 Dsui_2872 FKBP-type peptidyl-prolyl cis-trans isomerase low > 51
Pseudomonas sp. RS175 0.49 PFR28_04412 hypothetical protein 0.29 PFR28_00197 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD low > 88
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_2126 DNA repair protein RadC 0.29 Pf1N1B4_1052 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) low > 87
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_09220 hypothetical protein 0.28 AO353_05055 peptidylprolyl isomerase low > 101
Paraburkholderia graminis OAS925 0.48 ABIE53_003289 DNA repair protein RadC 0.62 ABIE53_002721 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD low > 113
Pseudomonas stutzeri RCH2 0.47 Psest_3803 DNA repair protein radc 0.30 Psest_3212 FKBP-type peptidyl-prolyl cis-trans isomerases 2 low > 67
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_04066 DNA replication and repair protein RadC 0.61 H281DRAFT_00535 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF1170 DNA repair protein RadC 0.38 GFF3652 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) low > 90
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_12545 hypothetical protein 0.29 AO356_16690 peptidylprolyl isomerase low > 104
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS03085 DNA repair protein RadC 0.61 QEN71_RS06075 peptidylprolyl isomerase low > 153
Kangiella aquimarina DSM 16071 0.46 B158DRAFT_0781 DNA repair protein radc 0.27 B158DRAFT_0587 FKBP-type peptidyl-prolyl cis-trans isomerases 2 low > 40
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS29445 JAB domain-containing protein 0.30 PFLU_RS03790 peptidylprolyl isomerase low > 109
Pseudomonas fluorescens SBW25 0.46 PFLU_RS29445 JAB domain-containing protein 0.30 PFLU_RS03790 peptidylprolyl isomerase 0.50 22
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS15625 hypothetical protein 0.61 BPHYT_RS12485 peptidyl-prolyl cis-trans isomerase low > 109
Pseudomonas simiae WCS417 0.45 PS417_27770 hypothetical protein 0.29 PS417_03740 peptidylprolyl isomerase low > 88
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_4377 DNA repair protein RadC 0.29 Pf6N2E2_5262 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) low > 103
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_798 DNA repair protein RadC 0.29 PfGW456L13_4988 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) low > 87
Pseudomonas putida KT2440 0.43 PP_5284 UPF0758 protein PP_5284 0.29 PP_0776 FKBP-type peptidyl-prolyl cis-trans isomerase — —
Rhodanobacter denitrificans MT42 0.43 LRK55_RS08695 DNA repair protein RadC 0.23 LRK55_RS14460 peptidylprolyl isomerase low > 63
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.4897.1 DNA repair protein RadC 0.29 Xcc-8004.3630.1 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) low > 74
Marinobacter adhaerens HP15 0.43 HP15_3321 DNA repair protein RadC-like protein 0.24 HP15_1758 peptidylprolyl isomerase, FKBP-type low > 73
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS09165 DNA repair protein RadC 0.23 LRK54_RS14745 peptidylprolyl isomerase low > 59
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_0222 DNA replication and repair protein RadC 0.29 Psyr_1009 Peptidylprolyl isomerase, FKBP-type low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_0222 DNA replication and repair protein RadC 0.29 Psyr_1009 Peptidylprolyl isomerase, FKBP-type — —
Pseudomonas sp. S08-1 0.42 OH686_13620 UPF0758 family protein 0.24 OH686_06255 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD low > 80
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS15615 DNA repair protein RadC 0.26 ABZR86_RS00495 peptidylprolyl isomerase low > 74
Alteromonas macleodii MIT1002 0.41 MIT1002_00049 DNA repair protein RadC 0.27 MIT1002_02725 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD low > 70
Variovorax sp. SCN45 0.41 GFF5700 UPF0758 family protein 0.45 GFF7163 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) low > 127
Shewanella amazonensis SB2B 0.41 Sama_0327 radC DNA repair protein RadC (RefSeq) 0.29 Sama_0904 peptidyl-prolyl cis-trans isomerase SlyD (RefSeq) 0.48 46
Variovorax sp. OAS795 0.40 ABID97_RS07700 DNA repair protein RadC 0.45 ABID97_RS02385 peptidylprolyl isomerase low > 91
Pectobacterium carotovorum WPP14 0.40 HER17_RS20830 DNA repair protein RadC 0.30 HER17_RS01965 peptidylprolyl isomerase low > 75
Acidovorax sp. GW101-3H11 0.40 Ac3H11_1774 DNA repair protein RadC 0.34 Ac3H11_1303 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.29 30
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_15660 radC DNA repair protein RadC 0.25 OKGIIK_03570 Peptidyl-prolyl cis-trans isomerase low > 52
Acinetobacter radioresistens SK82 0.39 MPMX26_02636 hypothetical protein 0.25 MPMX26_01005 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD — —
Pantoea sp. MT58 0.39 IAI47_00620 DNA repair protein RadC 0.25 IAI47_02040 peptidylprolyl isomerase low > 76
Erwinia tracheiphila SCR3 0.36 LU632_RS21995 radC DNA repair protein RadC 0.25 LU632_RS22725 slyD peptidylprolyl isomerase low > 74
Lysobacter sp. OAE881 0.35 ABIE51_RS00095 DNA repair protein RadC 0.19 ABIE51_RS06395 peptidylprolyl isomerase 0.48 38
Pontibacter actiniarum KMM 6156, DSM 19842 0.28 CA264_13835 hypothetical protein 0.16 CA264_05445 peptidylprolyl isomerase 0.32 66
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS02725 hypothetical protein 0.20 CA265_RS12900 peptidylprolyl isomerase low > 88
Fusobacterium nucleatum SB010 0.27 HUW76_05635 DNA repair protein RadC 0.30 HUW76_01765 peptidylprolyl isomerase low > 35

Not shown: 45 genomes with orthologs for HSERO_RS05945 only; 2 genomes with orthologs for HSERO_RS16370 only