| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS17745 | | hypothetical protein | 1.0 | HSERO_RS15345 | | cytochrome BD oxidase subunit II | 0.31 | 20 |
| Ralstonia solanacearum UW163 | 0.63 | UW163_RS10135 | | ATP-binding protein | 0.18 | UW163_RS21045 | | cytochrome d ubiquinol oxidase subunit II | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.63 | RALBFv3_RS03535 | | ATP-binding protein | 0.18 | RALBFv3_RS18085 | | cytochrome d ubiquinol oxidase subunit II | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.62 | RS_RS10985 | | ATP-binding protein | 0.18 | RS_RS22955 | | cytochrome d ubiquinol oxidase subunit II | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.60 | RR42_RS04740 | | ATP-binding protein | 0.16 | RR42_RS28280 | | ubiquinol oxidase subunit II | low | > 128 |
| Variovorax sp. SCN45 | 0.58 | GFF318 | | Uncharacterized protein YjgR | 0.53 | GFF2652 | | Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) | low | > 127 |
| Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS13690 | | DUF853 domain-containing protein | 0.18 | RPSI07_RS05550 | | cytochrome d ubiquinol oxidase subunit II | low | > 81 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.57 | GFF4522 | | ATPase component BioM of energizing module of biotin ECF transporter | 0.12 | GFF216 | | Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) | low | > 90 |
| Variovorax sp. OAS795 | 0.57 | ABID97_RS16815 | | helicase HerA-like domain-containing protein | 0.18 | ABID97_RS28655 | | cytochrome d ubiquinol oxidase subunit II | low | > 91 |
| Dechlorosoma suillum PS | 0.56 | Dsui_0490 | | putative ATPase | 0.53 | Dsui_1916 | | cytochrome d oxidase cyd, subunit II | low | > 51 |
| Castellaniella sp019104865 MT123 | 0.55 | ABCV34_RS06665 | | helicase HerA-like C-terminal domain-containing protein | 0.49 | ABCV34_RS14395 | | cytochrome d ubiquinol oxidase subunit II | low | > 48 |
| Rahnella sp. WP5 | 0.52 | EX31_RS04655 | | DUF853 domain-containing protein | 0.53 | EX31_RS23465 | | cytochrome d ubiquinol oxidase subunit II | low | > 89 |
| Escherichia coli ECOR38 | 0.52 | HEPCGN_09965 | yjgR | Uncharacterized protein YjgR | 0.56 | HEPCGN_01430 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia coli ECRC62 | 0.52 | BNILDI_07475 | yjgR | Uncharacterized protein YjgR | 0.56 | BNILDI_21270 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia coli ECOR27 | 0.51 | NOLOHH_04040 | yjgR | Uncharacterized protein YjgR | 0.56 | NOLOHH_23275 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia coli BW25113 | 0.51 | b4263 | yjgR | predicted ATPase (NCBI) | 0.56 | b0734 | cydB | cytochrome d terminal oxidase, subunit II (NCBI) | — | — |
| Escherichia coli BL21 | 0.51 | ECD_04129 | | DUF853 family protein with NTPase fold | 0.56 | ECD_00693 | | cytochrome d terminal oxidase, subunit II | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.51 | OHPLBJKB_03773 | | hypothetical protein | 0.56 | OHPLBJKB_02980 | | Cytochrome bd-I ubiquinol oxidase subunit 2 | — | — |
| Escherichia coli ECRC98 | 0.51 | JDDGAC_15415 | yjgR | Uncharacterized protein YjgR | 0.56 | JDDGAC_10495 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia coli ECRC100 | 0.51 | OKFHMN_11775 | yjgR | Uncharacterized protein YjgR | 0.56 | OKFHMN_06840 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia coli ECRC99 | 0.51 | KEDOAH_16380 | yjgR | Uncharacterized protein YjgR | 0.56 | KEDOAH_21125 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia coli ECRC102 | 0.51 | NIAGMN_09625 | yjgR | Uncharacterized protein YjgR | 0.56 | NIAGMN_04890 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia coli ECRC101 | 0.51 | MCAODC_02280 | yjgR | Uncharacterized protein YjgR | 0.56 | MCAODC_26060 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia fergusonii Becca | 0.51 | EFB2_04272 | | hypothetical protein | 0.56 | EFB2_03373 | | Cytochrome bd-I ubiquinol oxidase subunit 2 | — | — |
| Escherichia coli Nissle 1917 | 0.51 | ECOLIN_RS24710 | | helicase HerA-like C-terminal domain-containing protein | 0.56 | ECOLIN_RS03905 | | cytochrome d ubiquinol oxidase subunit II | — | — |
| Serratia liquefaciens MT49 | 0.51 | IAI46_23600 | | DUF853 family protein | 0.53 | IAI46_06300 | | cytochrome d ubiquinol oxidase subunit II | low | > 86 |
| Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_3273 | | Predicted ATPase | 0.55 | EX28DRAFT_2258 | | cytochrome d oxidase, subunit II (cydB) | low | > 76 |
| Pantoea sp. MT58 | 0.50 | IAI47_16720 | | DUF853 domain-containing protein | 0.53 | IAI47_13720 | | cytochrome d ubiquinol oxidase subunit II | low | > 76 |
| Enterobacter sp. TBS_079 | 0.50 | MPMX20_04124 | | hypothetical protein | 0.57 | MPMX20_01362 | | Cytochrome bd-I ubiquinol oxidase subunit 2 | low | > 85 |
| Klebsiella michiganensis M5al | 0.50 | BWI76_RS03060 | | ATP-binding protein | 0.55 | BWI76_RS08500 | | cytochrome d ubiquinol oxidase subunit 2 | low | > 92 |
| Sinorhizobium meliloti 1021 | 0.48 | SMc00100 | | hypothetical protein | 0.18 | SMc02254 | | quinol oxidase subunit II transmembrane protein | — | — |
| Rhodopseudomonas palustris CGA009 | 0.48 | TX73_009475 | | DUF853 family protein | 0.18 | TX73_024915 | | cytochrome d ubiquinol oxidase subunit II | low | > 86 |
| Rhizobium sp. OAE497 | 0.48 | ABIE40_RS22125 | | helicase HerA-like C-terminal domain-containing protein | 0.51 | ABIE40_RS20495 | | cytochrome d ubiquinol oxidase subunit II | low | > 107 |
| Agrobacterium fabrum C58 | 0.48 | Atu0860 | | hypothetical protein | 0.53 | Atu4092 | | cytochrome d oxidase subunit II | low | > 89 |
| Bosea sp. OAE506 | 0.46 | ABIE41_RS21605 | | helicase HerA-like domain-containing protein | 0.16 | ABIE41_RS22795 | | cytochrome d ubiquinol oxidase subunit II | low | > 77 |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS08070 | | helicase HerA-like domain-containing protein | 0.43 | ABZR86_RS11960 | | cytochrome d ubiquinol oxidase subunit II | low | > 74 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.45 | A4249_RS14745 | | DUF853 family protein | 0.17 | A4249_RS11600 | | cytochrome d ubiquinol oxidase subunit II | low | > 48 |
| Phaeobacter inhibens DSM 17395 | 0.45 | PGA1_c15960 | | Predicted ATPase | 0.18 | PGA1_c19660 | | cytochrome d ubiquinol oxidase subunit 2 | low | > 62 |
| Caulobacter crescentus NA1000 Δfur | 0.44 | CCNA_00088 | | HerA helicase-related ATPase | 0.50 | CCNA_00801 | | cytochrome bd-type quinol oxidase, subunit 2 cydB | low | > 67 |
| Caulobacter crescentus NA1000 | 0.44 | CCNA_00088 | | HerA helicase-related ATPase | 0.50 | CCNA_00801 | | cytochrome bd-type quinol oxidase, subunit 2 cydB | 0.41 | 63 |
| Lysobacter sp. OAE881 | 0.44 | ABIE51_RS08185 | | helicase HerA-like domain-containing protein | 0.15 | ABIE51_RS02045 | | cytochrome d ubiquinol oxidase subunit II | low | > 62 |
| Rhodanobacter denitrificans MT42 | 0.43 | LRK55_RS01535 | | DUF853 family protein | 0.46 | LRK55_RS11430 | | cytochrome d ubiquinol oxidase subunit II | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.43 | LRK54_RS01755 | | DUF853 family protein | 0.46 | LRK54_RS11705 | | cytochrome d ubiquinol oxidase subunit II | low | > 59 |
| Shewanella sp. ANA-3 | 0.43 | Shewana3_0459 | | protein of unknown function DUF853, NPT hydrolase putative (RefSeq) | 0.57 | Shewana3_1242 | | cytochrome d ubiquinol oxidase, subunit II (RefSeq) | low | > 73 |
| Dinoroseobacter shibae DFL-12 | 0.43 | Dshi_1614 | | protein of unknown function DUF853 NPT hydrolase putative (RefSeq) | 0.12 | Dshi_2689 | | cytochrome bd ubiquinol oxidase subunit II (RefSeq) | low | > 64 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.42 | Xcc-8004.1948.1 | | ATPase component BioM of energizing module of biotin ECF transporter | 0.50 | Xcc-8004.2332.1 | | Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.42 | OKGIIK_04775 | herA | ATP-binding protein | 0.44 | OKGIIK_12190 | cydB | cytochrome d ubiquinol oxidase subunit II | low | > 52 |
| Shewanella oneidensis MR-1 | 0.42 | SO0459 | | conserved hypothetical protein (NCBI ptt file) | 0.57 | SO3285 | cydB | cytochrome d ubiquinol oxidase, subunit II (NCBI ptt file) | low | > 76 |
| Pseudomonas fluorescens FW300-N2C3 | 0.39 | AO356_17915 | | ATP-binding protein | 0.19 | AO356_15645 | | ubiquinol oxidase subunit II | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.39 | Pf6N2E2_5513 | | ATPase component BioM of energizing module of biotin ECF transporter | 0.19 | Pf6N2E2_5069 | | putative Cytochrome bd2, subunit II | low | > 103 |
| Pseudomonas putida KT2440 | 0.38 | PP_1372 | | conserved protein of unknown function | 0.18 | PP_4650 | | Ubiquinol oxidase subunit II, cyanide insensitive | low | > 96 |
| Pseudomonas sp. RS175 | 0.38 | PFR28_03433 | | hypothetical protein | 0.19 | PFR28_03800 | | Cytochrome bd-II ubiquinol oxidase subunit 2 | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.37 | PfGW456L13_1831 | | ATPase component BioM of energizing module of biotin ECF transporter | 0.19 | PfGW456L13_1436 | | putative Cytochrome bd2, subunit II | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.37 | Pf1N1B4_659 | | ATPase component BioM of energizing module of biotin ECF transporter | 0.19 | Pf1N1B4_2761 | | putative Cytochrome bd2, subunit II | low | > 87 |
| Pseudomonas sp. S08-1 | 0.37 | OH686_18310 | | Uncharacterized protein YjgR | 0.19 | OH686_01510 | | cytochrome d ubiquinol oxidase, subunit II | low | > 80 |
Not shown: 3 genomes with orthologs for HSERO_RS17745 only; 38 genomes with orthologs for HSERO_RS15345 only