Conservation of cofitness between HSERO_RS11580 and HSERO_RS11285 in Herbaspirillum seropedicae SmR1

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS11580 beta-lactamase 1.0 HSERO_RS11285 DNA polymerase 0.27 3
Pseudomonas putida KT2440 0.73 PP_0052 beta-lactamase domain protein, putative hydrolase 0.13 PP_3118 DNA linked enzyme involved in DNA repair low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_0078 Beta-lactamase-like protein 0.16 Psyr_2522 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_0078 Beta-lactamase-like protein 0.16 Psyr_2522 conserved hypothetical protein low > 86
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_1531 FIG146518: Zn-dependent hydrolases, including glyoxylases 0.13 Pf6N2E2_2086 DNA polymerase-like protein PA0670 low > 103
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_24320 MBL fold metallo-hydrolase 0.15 AO353_22710 DNA repair nucleotidyltransferase low > 101
Pseudomonas stutzeri RCH2 0.66 Psest_1789 Zn-dependent hydrolases, including glyoxylases 0.17 Psest_1979 Nucleotidyltransferase/DNA polymerase involved in DNA repair low > 67
Marinobacter adhaerens HP15 0.63 HP15_3977 metallo-beta-lactamase family protein 0.20 HP15_1334 Error-prone polymerase for DNA repair (imuB or polY like) (from data) low > 73
Rhodanobacter denitrificans FW104-10B01 0.63 LRK54_RS07730 MBL fold metallo-hydrolase 0.17 LRK54_RS00240 DNA polymerase Y family protein low > 59
Rhodanobacter denitrificans MT42 0.63 LRK55_RS07460 MBL fold metallo-hydrolase 0.17 LRK55_RS18140 DNA polymerase Y family protein low > 63
Acidovorax sp. GW101-3H11 0.62 Ac3H11_2265 FIG146518: Zn-dependent hydrolases, including glyoxylases 0.15 Ac3H11_4194 DNA polymerase-like protein PA0670 low > 79
Brevundimonas sp. GW460-12-10-14-LB2 0.61 A4249_RS11565 MBL fold metallo-hydrolase 0.12 A4249_RS05370 DNA polymerase Y family protein low > 48
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS35440 MBL fold metallo-hydrolase 0.36 RR42_RS32800 nucleotidyltransferase low > 128
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_3538 FIG146518: Zn-dependent hydrolases, including glyoxylases 0.13 PfGW456L13_2821 DNA polymerase-like protein PA0670 low > 87
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS02055 MBL fold metallo-hydrolase 0.36 RALBFv3_RS19920 DNA polymerase Y family protein low > 76
Ralstonia solanacearum UW163 0.60 UW163_RS15380 MBL fold metallo-hydrolase 0.36 UW163_RS19255 DNA polymerase Y family protein — —
Ralstonia solanacearum GMI1000 0.59 RS_RS07750 MBL fold metallo-hydrolase 0.36 RS_RS20935 DNA polymerase Y family protein low > 80
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_4482 FIG146518: Zn-dependent hydrolases, including glyoxylases 0.13 Pf1N1B4_5680 DNA polymerase-like protein PA0670 low > 87
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS19340 MBL fold metallo-hydrolase 0.13 PFLU_RS17570 DNA polymerase Y family protein low > 109
Ralstonia solanacearum PSI07 0.59 RPSI07_RS15370 MBL fold metallo-hydrolase 0.36 RPSI07_RS03295 DNA polymerase Y family protein low > 81
Pseudomonas simiae WCS417 0.59 PS417_17535 beta-lactamase 0.13 PS417_15585 DNA repair nucleotidyltransferase low > 88
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS14030 MBL fold metallo-hydrolase 0.37 ABZR87_RS20565 DNA polymerase Y family protein low > 80
Pseudomonas fluorescens SBW25 0.59 PFLU_RS19340 MBL fold metallo-hydrolase 0.13 PFLU_RS17570 DNA polymerase Y family protein low > 109
Pseudomonas sp. RS175 0.58 PFR28_02443 putative metallo-hydrolase 0.13 PFR28_01354 Protein ImuB low > 88
Phaeobacter inhibens DSM 17395 0.58 PGA1_c12760 beta-lactamase hydrolase-like protein Blh 0.12 PGA1_c00330 Error-prone polymerase for DNA repair (imuB or polY like) (from data) low > 62
Castellaniella sp019104865 MT123 0.58 ABCV34_RS06060 MBL fold metallo-hydrolase 0.27 ABCV34_RS12755 DNA polymerase Y family protein low > 48
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_23000 MBL fold metallo-hydrolase 0.14 AO356_21815 DNA repair nucleotidyltransferase low > 104
Hydrogenophaga sp. GW460-11-11-14-LB1 0.57 GFF3377 SoxH protein, homolog 0.22 GFF4008 DNA polymerase-like protein PA0670 low > 90
Dinoroseobacter shibae DFL-12 0.56 Dshi_2517 beta-lactamase domain protein (RefSeq) 0.12 Dshi_3997 hypothetical protein (RefSeq) low > 64
Variovorax sp. SCN45 0.55 GFF6926 MBL-fold metallo-hydrolase superfamily 0.18 GFF679 DNA polymerase-like protein PA0670 low > 127
Lysobacter sp. OAE881 0.53 ABIE51_RS17110 MBL fold metallo-hydrolase 0.15 ABIE51_RS11845 DNA polymerase Y family protein low > 62
Sphingomonas koreensis DSMZ 15582 0.53 Ga0059261_0945 Zn-dependent hydrolases, including glyoxylases 0.13 Ga0059261_2477 Nucleotidyltransferase/DNA polymerase involved in DNA repair low > 68
Rhodopseudomonas palustris CGA009 0.53 TX73_001890 MBL fold metallo-hydrolase 0.10 TX73_009270 DNA polymerase Y family protein low > 86
Caulobacter crescentus NA1000 Δfur 0.51 CCNA_02959 Zn-dependent hydrolase, glyoxalase II family 0.11 CCNA_03318 DNA polymerase Y-family protein ImuB low > 67
Caulobacter crescentus NA1000 0.51 CCNA_02959 Zn-dependent hydrolase, glyoxalase II family 0.11 CCNA_03318 DNA polymerase Y-family protein ImuB low > 66
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS15815 MBL fold metallo-hydrolase 0.17 ABZR86_RS18205 DNA polymerase Y family protein low > 74
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.1151.1 Beta-lactamase 0.17 Xcc-8004.3896.1 hypothetical protein low > 74
Dechlorosoma suillum PS 0.14 Dsui_0929 Zn-dependent hydrolase, glyoxylase 0.21 Dsui_2266 nucleotidyltransferase/DNA polymerase involved in DNA repair — —

Not shown: 4 genomes with orthologs for HSERO_RS11580 only; 14 genomes with orthologs for HSERO_RS11285 only