Conservation of cofitness between HSERO_RS05425 and HSERO_RS06245 in Herbaspirillum seropedicae SmR1

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS05425 decarboxylase 1.0 HSERO_RS06245 catalase-peroxidase 0.34 6
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS22440 DNA-binding protein 0.75 BPHYT_RS10310 catalase-peroxidase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_03509 transcriptional regulator, GntR family 0.70 H281DRAFT_00053 catalase-peroxidase low > 103
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS21340 DNA-binding protein 0.72 RR42_RS26270 hydroperoxidase low > 128
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS17355 PLP-dependent aminotransferase family protein 0.75 QEN71_RS29740 catalase/peroxidase HPI low > 153
Ralstonia solanacearum PSI07 0.48 RPSI07_RS23800 PLP-dependent aminotransferase family protein 0.72 RPSI07_RS20110 catalase/peroxidase HPI low > 81
Ralstonia solanacearum UW163 0.48 UW163_RS04030 PLP-dependent aminotransferase family protein 0.73 UW163_RS00460 catalase/peroxidase HPI
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS09550 PLP-dependent aminotransferase family protein 0.73 RALBFv3_RS13105 catalase/peroxidase HPI low > 76
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS05185 PLP-dependent aminotransferase family protein 0.65 ABZR87_RS01240 catalase/peroxidase HPI low > 80
Pectobacterium carotovorum WPP14 0.44 HER17_RS09875 PLP-dependent aminotransferase family protein 0.56 HER17_RS09165 catalase/peroxidase HPI low > 75
Dickeya dianthicola 67-19 0.44 HGI48_RS11865 PLP-dependent aminotransferase family protein 0.70 HGI48_RS08090 catalase/peroxidase HPI low > 71
Dickeya dianthicola ME23 0.44 DZA65_RS12410 PLP-dependent aminotransferase family protein 0.70 DZA65_RS08685 catalase/peroxidase HPI low > 75
Dickeya dadantii 3937 0.43 DDA3937_RS11835 PLP-dependent aminotransferase family protein 0.70 DDA3937_RS07265 catalase/peroxidase HPI low > 74
Serratia liquefaciens MT49 0.42 IAI46_22170 PLP-dependent aminotransferase family protein 0.67 IAI46_17030 catalase/peroxidase HPI low > 86
Klebsiella michiganensis M5al 0.41 BWI76_RS26380 decarboxylase 0.60 BWI76_RS13925 catalase/peroxidase HPI low > 92
Rahnella sp. WP5 0.41 EX31_RS00090 PLP-dependent aminotransferase family protein 0.59 EX31_RS11140 catalase/peroxidase HPI low > 89
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF2040 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.63 GFF637 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 90
Pantoea sp. MT58 0.39 IAI47_19480 PLP-dependent aminotransferase family protein 0.58 IAI47_07215 catalase/peroxidase HPI low > 76
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS20415 PLP-dependent aminotransferase family protein 0.70 ABZR86_RS00615 catalase/peroxidase HPI low > 74
Azospirillum sp. SherDot2 0.34 MPMX19_03847 HTH-type transcriptional regulatory protein GabR 0.64 MPMX19_03084 Catalase-peroxidase low > 112
Variovorax sp. SCN45 0.31 GFF1662 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.73 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) low > 127
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_20995 transcriptional regulator 0.70 AO353_23210 hydroperoxidase low > 101
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_5999 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.70 Pf1N1B4_4230 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 87
Rhodopseudomonas palustris CGA009 0.30 TX73_007155 PLP-dependent aminotransferase family protein 0.65 TX73_002230 catalase/peroxidase HPI low > 86
Enterobacter asburiae PDN3 0.29 EX28DRAFT_2501 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 0.61 EX28DRAFT_4414 catalase/peroxidase HPI low > 76
Pseudomonas sp. S08-1 0.29 OH686_13310 Transcriptional regulator, GntR family domain / Aspartate aminotransferase 0.64 OH686_15490 catalase/peroxidase HPI low > 80
Enterobacter sp. TBS_079 0.29 MPMX20_01059 HTH-type transcriptional regulatory protein GabR 0.61 MPMX20_04528 Catalase-peroxidase low > 85
Acidovorax sp. GW101-3H11 0.29 Ac3H11_1092 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.69 Ac3H11_135 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 79
Dinoroseobacter shibae DFL-12 0.29 Dshi_0609 transcriptional regulator, GntR family with aminotransferase domain (RefSeq) 0.49 Dshi_3801 catalase/peroxidase HPI (RefSeq) low > 64
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_5056 transcriptional regulator, GntR family 0.72 Psyr_4208 heme catalase/peroxidase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_5056 transcriptional regulator, GntR family 0.72 Psyr_4208 heme catalase/peroxidase low > 86
Pseudomonas putida KT2440 0.28 PP_5342 Transcriptional regulator, GntR family 0.72 PP_3668 Catalase-peroxidase low > 96
Marinobacter adhaerens HP15 0.27 HP15_2761 transcriptional regulator, GntR family with aminotransferase domain protein 0.55 HP15_1397 peroxidase/catalase HPI low > 73
Dechlorosoma suillum PS 0.27 Dsui_2252 transcriptional regulator with HTH domain and aminotransferase domain 0.56 Dsui_2233 catalase/peroxidase HPI low > 51
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_12070 GntR family transcriptional regulator 0.72 AO356_07735 hydroperoxidase 0.33 66
Phaeobacter inhibens DSM 17395 0.27 PGA1_262p01530 transcriptional regulator, GntR family 0.53 PGA1_78p00050 peroxidase/catalase HPI low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.27 GFF1580 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.61 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 78
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_4288 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.72 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 103
Escherichia coli ECRC99 0.26 KEDOAH_07285 aRO8 DNA-binding transcriptional regulator 0.60 KEDOAH_14500 katG catalase/peroxidase HPI
Escherichia coli ECRC102 0.26 NIAGMN_18620 aRO8 DNA-binding transcriptional regulator 0.60 NIAGMN_11415 katG catalase/peroxidase HPI
Escherichia coli ECRC100 0.26 OKFHMN_20855 aRO8 DNA-binding transcriptional regulator 0.60 OKFHMN_13660 katG catalase/peroxidase HPI low > 80
Escherichia coli ECRC101 0.26 MCAODC_11375 aRO8 DNA-binding transcriptional regulator 0.60 MCAODC_04160 katG catalase/peroxidase HPI low > 87
Escherichia coli ECRC98 0.26 JDDGAC_24515 aRO8 DNA-binding transcriptional regulator 0.60 JDDGAC_17285 katG catalase/peroxidase HPI low > 86
Lysobacter sp. OAE881 0.26 ABIE51_RS00310 PLP-dependent aminotransferase family protein 0.69 ABIE51_RS07780 catalase/peroxidase HPI low > 62
Escherichia fergusonii Becca 0.26 EFB2_01257 HTH-type transcriptional regulatory protein GabR 0.60 EFB2_04671 Catalase-peroxidase low > 86
Escherichia coli Nissle 1917 0.26 ECOLIN_RS14900 PLP-dependent aminotransferase family protein 0.60 ECOLIN_RS22765 catalase/peroxidase HPI 0.51 43
Escherichia coli ECOR38 0.26 HEPCGN_20050 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain 0.60 HEPCGN_12305 katG catalase/peroxidase HPI low > 87
Rhizobium sp. OAE497 0.24 ABIE40_RS04930 PLP-dependent aminotransferase family protein 0.65 ABIE40_RS15040 catalase/peroxidase HPI low > 107
Sphingomonas koreensis DSMZ 15582 0.16 Ga0059261_3317 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 0.54 Ga0059261_3628 catalase/peroxidase HPI low > 68
Sinorhizobium meliloti 1021 0.15 SM_b21525 transcriptional regulator 0.66 SMa2379 KatB catalase/peroxidase low > 103

Not shown: 16 genomes with orthologs for HSERO_RS05425 only; 25 genomes with orthologs for HSERO_RS06245 only