Conservation of cofitness between HSERO_RS16540 and HSERO_RS02315 in Herbaspirillum seropedicae SmR1

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS16540 membrane protein 1.0 HSERO_RS02315 transcriptional regulator 0.41 2
Acidovorax sp. GW101-3H11 0.61 Ac3H11_2931 putative transmembrane protein 0.42 Ac3H11_3981 UPF0301 protein YqgE low > 79
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS13730 membrane protein 0.49 BPHYT_RS04220 hypothetical protein low > 109
Ralstonia solanacearum UW163 0.60 UW163_RS15190 DUF962 domain-containing protein 0.53 UW163_RS00955 DUF179 domain-containing protein — —
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS01880 DUF962 domain-containing protein 0.53 RALBFv3_RS12610 DUF179 domain-containing protein low > 76
Ralstonia solanacearum GMI1000 0.60 RS_RS07855 DUF962 domain-containing protein 0.52 RS_RS03395 YqgE/AlgH family protein — —
Paraburkholderia graminis OAS925 0.59 ABIE53_002921 hypothetical protein 0.49 ABIE53_001128 putative transcriptional regulator low > 113
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04484 hypothetical protein 0.49 H281DRAFT_04814 putative transcriptional regulator low > 103
Ralstonia solanacearum PSI07 0.59 RPSI07_RS15610 DUF962 domain-containing protein 0.53 RPSI07_RS20650 YqgE/AlgH family protein low > 81
Lysobacter sp. OAE881 0.59 ABIE51_RS05285 DUF962 domain-containing protein 0.33 ABIE51_RS16025 YqgE/AlgH family protein low > 62
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS05190 DUF962 domain-containing protein 0.51 QEN71_RS25795 YqgE/AlgH family protein low > 153
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS13820 Mpo1-like protein 0.50 ABZR87_RS08610 YqgE/AlgH family protein low > 80
Variovorax sp. SCN45 0.57 GFF2997 FIG027190: Putative transmembrane protein 0.42 GFF2157 UPF0301 protein YqgE low > 127
Rhodanobacter sp. FW510-T8 0.56 OKGIIK_03620 DUF962 domain-containing protein 0.34 OKGIIK_11085 algH YqgE/AlgH family protein low > 52
Dyella japonica UNC79MFTsu3.2 0.54 ABZR86_RS00555 DUF962 domain-containing protein 0.35 ABZR86_RS10380 YqgE/AlgH family protein — —
Pseudomonas stutzeri RCH2 0.53 Psest_1876 Predicted membrane protein 0.34 Psest_0294 Putative transcriptional regulator low > 67
Rhodanobacter denitrificans MT42 0.53 LRK55_RS14510 DUF962 domain-containing protein 0.35 LRK55_RS03980 YqgE/AlgH family protein — —
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS14795 DUF962 domain-containing protein 0.35 LRK54_RS04210 YqgE/AlgH family protein low > 59
Alteromonas macleodii MIT1002 0.52 MIT1002_00528 putative membrane protein 0.37 MIT1002_03056 hypothetical protein low > 70
Shewanella oneidensis MR-1 0.52 SO1615 conserved hypothetical protein (NCBI ptt file) 0.33 SO3346 conserved hypothetical protein (NCBI ptt file) low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_3594 membrane protein-like protein 0.32 Psyr_0485 Protein of unknown function DUF179 low > 86
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS06455 membrane protein 0.50 RR42_RS15875 hypothetical protein low > 128
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_3594 membrane protein-like protein 0.32 Psyr_0485 Protein of unknown function DUF179 low > 86
Pseudomonas sp. RS175 0.51 PFR28_00796 hypothetical protein 0.33 PFR28_04234 hypothetical protein low > 88
Pseudomonas sp. S08-1 0.51 OH686_20740 hypothetical protein 0.36 OH686_10925 UPF0301 protein YqgE low > 80
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_04005 hypothetical protein 0.34 AO356_13465 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_3541 FIG027190: Putative transmembrane protein 0.34 Pf1N1B4_2350 UPF0301 protein YqgE low > 87
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_2636 FIG027190: Putative transmembrane protein 0.34 Pf6N2E2_4609 UPF0301 protein YqgE low > 103
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_4415 FIG027190: Putative transmembrane protein 0.34 PfGW456L13_1019 UPF0301 protein YqgE low > 87
Marinobacter adhaerens HP15 0.49 HP15_1465 conserved hypothetical protein, membrane 0.36 HP15_3510 transcriptional regulator low > 73
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_03266 hypothetical protein 0.29 CCNA_03506 putative transcriptional regulator low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS10535 DUF962 domain-containing protein 0.24 A4249_RS00260 YqgE/AlgH family protein low > 48
Caulobacter crescentus NA1000 0.48 CCNA_03266 hypothetical protein 0.29 CCNA_03506 putative transcriptional regulator low > 66
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_18470 hypothetical protein 0.34 AO353_08120 hypothetical protein low > 101
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS23840 DUF962 domain-containing protein 0.32 PFLU_RS28330 YqgE/AlgH family protein low > 109
Pseudomonas fluorescens SBW25 0.47 PFLU_RS23840 DUF962 domain-containing protein 0.32 PFLU_RS28330 YqgE/AlgH family protein low > 109
Pseudomonas simiae WCS417 0.47 PS417_22215 membrane protein 0.33 PS417_26685 hypothetical protein low > 88
Shewanella sp. ANA-3 0.46 Shewana3_2828 hypothetical protein (RefSeq) 0.33 Shewana3_1200 hypothetical protein (RefSeq) — —
Pseudomonas putida KT2440 0.46 PP_4509 conserved protein of unknown function 0.32 PP_4995 putative protein possibly involved in the control of exopolysaccharide production low > 96
Shewanella amazonensis SB2B 0.45 Sama_1127 hypothetical protein (RefSeq) 0.35 Sama_2472 putative transcriptional regulator (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0680 Predicted membrane protein 0.36 B158DRAFT_0191 Putative transcriptional regulator low > 40
Shewanella loihica PV-4 0.42 Shew_2647 hypothetical protein (RefSeq) 0.31 Shew_1144 hypothetical protein (RefSeq) — —

Not shown: 3 genomes with orthologs for HSERO_RS16540 only; 41 genomes with orthologs for HSERO_RS02315 only