Conservation of cofitness between HSERO_RS06580 and HSERO_RS02135 in Herbaspirillum seropedicae SmR1

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS06580 benzoate transporter 1.0 HSERO_RS02135 phosphomethylpyrimidine kinase 0.37 3
Acinetobacter radioresistens SK82 0.51 MPMX26_01698 Inner membrane protein YdcO 0.24 MPMX26_02438 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase — —
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_819 Benzoate transport protein 0.23 Pf1N1B4_2718 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) low > 87
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_5299 Benzoate transport protein 0.23 Pf6N2E2_5024 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) low > 103
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_16870 benzoate transporter 0.28 AO356_15435 hydrogenase low > 104
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_29330 benzoate transporter 0.28 AO353_06350 hydrogenase low > 101
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1501 Benzoate transport protein 0.28 PfGW456L13_1385 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) low > 87
Pseudomonas stutzeri RCH2 0.42 Psest_2691 benzoate transporter 0.27 Psest_0537 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 67
Lysobacter sp. OAE881 0.39 ABIE51_RS02455 benzoate/H(+) symporter BenE family transporter 0.19 ABIE51_RS07970 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Rhodospirillum rubrum S1H 0.38 Rru_A1144 Benzoate membrane transport protein (NCBI) 0.23 Rru_A1102 Phosphomethylpyrimidine kinase (NCBI) — —
Desulfovibrio vulgaris Miyazaki F 0.38 DvMF_2241 benzoate transporter (RefSeq) 0.22 DvMF_1376 phosphomethylpyrimidine kinase (RefSeq) — —
Pseudomonas putida KT2440 0.38 PP_3167 benzoate transport protein 0.29 PP_4782 Phosphomethylpyrimidine kinase low > 96
Acidovorax sp. GW101-3H11 0.38 Ac3H11_3917 Benzoate transport protein 0.21 Ac3H11_1063 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) — —
Azospirillum sp. SherDot2 0.38 MPMX19_03070 Inner membrane protein YdcO 0.19 MPMX19_06182 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase — —
Azospirillum brasilense Sp245 0.38 AZOBR_RS19910 benzoate transporter 0.17 AZOBR_RS07045 phosphomethylpyrimidine kinase — —
Rhodopseudomonas palustris CGA009 0.37 TX73_014490 benzoate/H(+) symporter BenE family transporter 0.17 TX73_020570 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF2649 Benzoate transport protein 0.21 GFF249 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) low > 90
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_1839 Benzoate membrane transport protein 0.28 Psyr_4340 phosphomethylpyrimidine kinase, putative low > 86
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_1839 Benzoate membrane transport protein 0.28 Psyr_4340 phosphomethylpyrimidine kinase, putative low > 86
Castellaniella sp019104865 MT123 0.37 ABCV34_RS02900 benzoate/H(+) symporter BenE family transporter 0.18 ABCV34_RS14505 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Pseudomonas sp. S08-1 0.37 OH686_00595 Benzoate transport protein 0.27 OH686_09185 Hydroxymethylpyrimidine phosphate kinase ThiD low > 80
Serratia liquefaciens MT49 0.36 IAI46_11435 benzoate/H(+) symporter BenE family transporter 0.20 IAI46_19100 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 86
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS06050 membrane protein 0.17 BPHYT_RS12250 phosphomethylpyrimidine kinase — —
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS22525 benzoate/H(+) symporter BenE family transporter 0.29 PFLU_RS26530 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 109
Pseudomonas fluorescens SBW25 0.36 PFLU_RS22525 benzoate/H(+) symporter BenE family transporter 0.29 PFLU_RS26530 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 109
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.5286.1 Benzoate transport protein 0.18 Xcc-8004.3091.1 hypothetical protein low > 74
Rahnella sp. WP5 0.36 EX31_RS05715 benzoate/H(+) symporter BenE family transporter 0.20 EX31_RS20390 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 89
Pseudomonas simiae WCS417 0.36 PS417_20910 membrane protein 0.29 PS417_24600 hydrogenase low > 88
Variovorax sp. OAS795 0.36 ABID97_RS04625 benzoate/H(+) symporter BenE family transporter 0.18 ABID97_RS15330 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Pseudomonas sp. RS175 0.36 PFR28_01059 Inner membrane protein YdcO 0.26 PFR28_03843 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 88
Phaeobacter inhibens DSM 17395 0.35 PGA1_c29480 putative inner membrane transport protein 0.15 PGA1_c09030 phosphomethylpyrimidine kinase ThiD low > 62
Pectobacterium carotovorum WPP14 0.35 HER17_RS21705 benzoate/H(+) symporter BenE family transporter 0.20 HER17_RS06265 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 75
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS14695 membrane protein 0.15 RR42_RS01370 phosphomethylpyrimidine kinase — —
Escherichia coli Nissle 1917 0.34 ECOLIN_RS08270 BenE family transporter YdcO 0.19 ECOLIN_RS12335 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia fergusonii Becca 0.34 EFB2_02549 Inner membrane protein YdcO 0.19 EFB2_01754 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 86
Escherichia coli ECOR38 0.33 HEPCGN_26210 ydcO BenE family transporter YdcO 0.19 HEPCGN_02760 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 87
Escherichia coli ECOR27 0.33 NOLOHH_19285 ydcO BenE family transporter YdcO 0.19 NOLOHH_15415 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 75
Escherichia coli ECRC99 0.33 KEDOAH_26830 ydcO BenE family transporter YdcO 0.19 KEDOAH_04075 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_02282 Inner membrane protein YdcO 0.19 OHPLBJKB_01607 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 73
Escherichia coli BW25113 0.33 b1433 b1433 putative membrane transport protein (VIMSS) 0.19 b2103 thiD phosphomethylpyrimidine kinase (NCBI) low > 76
Escherichia coli ECRC100 0.33 OKFHMN_01610 ydcO BenE family transporter YdcO 0.19 OKFHMN_24075 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 80
Escherichia coli ECRC98 0.33 JDDGAC_04100 ydcO BenE family transporter YdcO 0.19 JDDGAC_28185 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 86
Escherichia coli BL21 0.33 ECD_01391 BenE family inner membrane putative transporter 0.19 ECD_02031 hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase low > 61
Escherichia coli ECRC102 0.33 NIAGMN_25745 ydcO BenE family transporter YdcO 0.19 NIAGMN_22020 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli ECRC62 0.33 BNILDI_17735 ydcO BenE family transporter YdcO 0.19 BNILDI_14330 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF2596 Benzoate transport protein 0.18 GFF3834 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) low > 78
Enterobacter sp. TBS_079 0.31 MPMX20_02242 Inner membrane protein YdcO 0.19 MPMX20_03076 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 85
Klebsiella michiganensis M5al 0.31 BWI76_RS13360 benzoate transporter 0.18 BWI76_RS19375 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 92
Pantoea sp. MT58 0.31 IAI47_10270 benzoate/H(+) symporter BenE family transporter 0.19 IAI47_06810 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 76
Enterobacter asburiae PDN3 0.31 EX28DRAFT_1224 benzoate transporter 0.18 EX28DRAFT_0469 hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 76
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS14875 benzoate/H(+) symporter BenE family transporter 0.17 A4249_RS15985 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_09835 benzoate transporter 0.17 CSW01_06545 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 62
Sinorhizobium meliloti 1021 0.23 SMc02691 membrane transporter 0.21 SM_b20962 phoshomethylpyrimidine kinase low > 103
Rhizobium sp. OAE497 0.23 ABIE40_RS13335 benzoate/H(+) symporter BenE family transporter 0.22 ABIE40_RS25930 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 107
Agrobacterium fabrum C58 0.22 Atu2265 benzoate transport protein 0.21 Atu3290 phosphomethylpyrimidine kinase low > 89
Bosea sp. OAE506 0.22 ABIE41_RS09390 benzoate/H(+) symporter BenE family transporter 0.20 ABIE41_RS21620 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —

Not shown: 8 genomes with orthologs for HSERO_RS06580 only; 32 genomes with orthologs for HSERO_RS02135 only