Conservation of cofitness between HSERO_RS03400 and HSERO_RS01765 in Herbaspirillum seropedicae SmR1

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS03400 cyclopropane-fatty-acyl-phospholipid synthase 1.0 HSERO_RS01765 type II secretion system protein F 0.25 8
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS02705 cyclopropane-fatty-acyl-phospholipid synthase family protein 0.34 QEN71_RS27310 type II secretion system F family protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.69 H281DRAFT_04137 cyclopropane-fatty-acyl-phospholipid synthase 0.34 H281DRAFT_06256 type IV pilus assembly protein PilC low > 103
Paraburkholderia graminis OAS925 0.69 ABIE53_003374 cyclopropane-fatty-acyl-phospholipid synthase 0.34 ABIE53_003595 type IV pilus assembly protein PilC low > 113
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS16000 cyclopropane-fatty-acyl-phospholipid synthase 0.33 BPHYT_RS17150 type II secretion system protein low > 109
Variovorax sp. SCN45 0.65 GFF139 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) 0.43 GFF2509 Type IV fimbrial assembly protein PilC low > 127
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS09145 cyclopropane-fatty-acyl-phospholipid synthase family protein 0.43 ABZR87_RS01850 type II secretion system F family protein low > 80
Ralstonia solanacearum UW163 0.62 UW163_RS00490 class I SAM-dependent methyltransferase 0.43 UW163_RS07440 type II secretion system F family protein — —
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS13075 class I SAM-dependent methyltransferase 0.43 RALBFv3_RS06185 type II secretion system F family protein low > 76
Ralstonia solanacearum PSI07 0.62 RPSI07_RS20150 class I SAM-dependent methyltransferase 0.45 RPSI07_RS11055 type II secretion system F family protein low > 81
Ralstonia solanacearum GMI1000 0.62 RS_RS03860 class I SAM-dependent methyltransferase 0.45 RS_RS14135 type II secretion system F family protein low > 80
Cupriavidus basilensis FW507-4G11 0.60 RR42_RS15325 cyclopropane-fatty-acyl-phospholipid synthase 0.45 RR42_RS17985 type II secretion system protein F low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF1766 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) 0.43 GFF1280 Type IV fimbrial assembly protein PilC low > 90
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_703 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) 0.43 PfGW456L13_1509 Type IV fimbrial assembly protein PilC low > 87
Pseudomonas simiae WCS417 0.46 PS417_28350 fatty acid methyltransferase 0.34 PS417_03900 type II secretion system protein F low > 88
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_1981 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) 0.43 Pf1N1B4_2841 Type IV fimbrial assembly protein PilC low > 87
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS30015 class I SAM-dependent methyltransferase 0.36 PFLU_RS03945 type II secretion system F family protein low > 109
Pseudomonas fluorescens SBW25 0.45 PFLU_RS30015 class I SAM-dependent methyltransferase 0.36 PFLU_RS03945 type II secretion system F family protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_11905 fatty acid methyltransferase 0.40 AO356_16010 type II secretion system protein F low > 104
Pseudomonas sp. RS175 0.45 PFR28_04540 Ubiquinone biosynthesis O-methyltransferase, mitochondrial 0.40 PFR28_03732 Type II secretion system protein F 0.35 58
Pseudomonas stutzeri RCH2 0.45 Psest_4127 Cyclopropane fatty acid synthase and related methyltransferases 0.41 Psest_3287 Type II secretory pathway, component PulF low > 67
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_5080 Cyclopropane-fatty-acyl-phospholipid synthase 0.42 Psyr_0797 type II secretion system protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_5080 Cyclopropane-fatty-acyl-phospholipid synthase 0.42 Psyr_0797 type II secretion system protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_10170 fatty acid methyltransferase 0.41 AO353_14325 type II secretion system protein F low > 101
Pseudomonas putida KT2440 0.44 PP_5365 putative fatty acid methyltransferase 0.31 PP_0633 Type 4 fimbrial assembly protein PilC low > 96
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_4256 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) 0.39 Pf6N2E2_5141 Type IV fimbrial assembly protein PilC low > 103
Variovorax sp. OAS795 0.38 ABID97_RS01420 cyclopropane-fatty-acyl-phospholipid synthase family protein 0.43 ABID97_RS23435 type II secretion system F family protein low > 91
Rhodospirillum rubrum S1H 0.30 Rru_A1910 Cyclopropane-fatty-acyl-phospholipid synthase (NCBI) 0.14 Rru_A0114 type II secretion system protein (NCBI) — —
Marinobacter adhaerens HP15 0.27 HP15_3250 cyclopropane-fatty-acyl-phospholipid synthase 0.38 HP15_2410 type IV pilus biogenesis protein PilC low > 73
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_1397 Cyclopropane fatty acid synthase and related methyltransferases 0.19 Ga0059261_3953 Type II secretory pathway, component PulF low > 68
Rahnella sp. WP5 0.24 EX31_RS13845 cyclopropane fatty acyl phospholipid synthase 0.25 EX31_RS03530 protein transport protein HofC low > 89
Serratia liquefaciens MT49 0.23 IAI46_05330 cyclopropane fatty acyl phospholipid synthase 0.23 IAI46_03515 protein transport protein HofC low > 86
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_03250 cfa cyclopropane fatty acyl phospholipid synthase 0.38 OKGIIK_10825 pulF Type II secretory pathway, component PulF low > 52
Enterobacter sp. TBS_079 0.23 MPMX20_01975 Cyclopropane-fatty-acyl-phospholipid synthase 0.22 MPMX20_01517 Putative type II secretion system protein F low > 85
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS21385 cyclopropane fatty acyl phospholipid synthase 0.39 ABZR86_RS10045 type II secretion system F family protein low > 74
Enterobacter asburiae PDN3 0.23 EX28DRAFT_1658 Cyclopropane fatty acid synthase and related methyltransferases 0.24 EX28DRAFT_2077 type II secretion system protein F low > 76
Lysobacter sp. OAE881 0.22 ABIE51_RS12710 cyclopropane fatty acyl phospholipid synthase 0.42 ABIE51_RS04810 type II secretion system F family protein low > 62
Escherichia coli ECOR27 0.22 NOLOHH_17890 cfa cyclopropane fatty acyl phospholipid synthase 0.23 NOLOHH_10985 gspF general secretion pathway protein F — —
Escherichia coli BL21 0.22 ECD_01632 cyclopropane fatty acyl phospholipid synthase, SAM-dependent 0.26 ECD_03178 general secretory pathway component, cryptic low > 61
Dickeya dianthicola ME23 0.22 DZA65_RS13145 cyclopropane fatty acyl phospholipid synthase 0.26 DZA65_RS15670 type II secretion system inner membrane protein GspF low > 75
Escherichia coli ECRC62 0.22 BNILDI_16680 cfa cyclopropane fatty acyl phospholipid synthase 0.17 BNILDI_08720 hofC protein transport protein HofC low > 75
Escherichia fergusonii Becca 0.22 EFB2_02331 Cyclopropane-fatty-acyl-phospholipid synthase 0.26 EFB2_00496 Putative type II secretion system protein F low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.22 OHPLBJKB_02063 Cyclopropane-fatty-acyl-phospholipid synthase 0.26 OHPLBJKB_00376 Putative type II secretion system protein F low > 73
Escherichia coli ECOR38 0.22 HEPCGN_05755 cfa cyclopropane fatty acyl phospholipid synthase 0.23 HEPCGN_18060 gspF general secretion pathway protein F low > 87
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS14405 cyclopropane fatty acyl phospholipid synthase 0.37 LRK54_RS03950 type II secretion system F family protein low > 59
Escherichia coli BW25113 0.22 b1661 cfa cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) (NCBI) 0.26 b3327 gspF general secretory pathway component, cryptic (NCBI) low > 76
Escherichia coli Nissle 1917 0.22 ECOLIN_RS09260 cyclopropane fatty acyl phospholipid synthase 0.26 ECOLIN_RS19070 type II secretion system inner membrane protein GspF low > 55
Dickeya dianthicola 67-19 0.22 HGI48_RS12690 cyclopropane fatty acyl phospholipid synthase 0.26 HGI48_RS14725 type II secretion system inner membrane protein GspF low > 71
Rhodanobacter denitrificans MT42 0.22 LRK55_RS14120 cyclopropane fatty acyl phospholipid synthase 0.36 LRK55_RS03720 type II secretion system F family protein low > 63
Escherichia coli ECRC101 0.22 MCAODC_18040 cfa cyclopropane fatty acyl phospholipid synthase 0.26 MCAODC_15275 gspF type II secretion system inner membrane protein GspF low > 87
Escherichia coli ECRC100 0.22 OKFHMN_27370 cfa cyclopropane fatty acyl phospholipid synthase 0.26 OKFHMN_00275 gspF type II secretion system inner membrane protein GspF low > 80
Pectobacterium carotovorum WPP14 0.22 HER17_RS09230 cyclopropane fatty acyl phospholipid synthase 0.27 HER17_RS06695 type II secretion system inner membrane protein GspF low > 75
Escherichia coli ECRC99 0.22 KEDOAH_00740 cfa cyclopropane fatty acyl phospholipid synthase 0.17 KEDOAH_17610 hofC protein transport protein HofC — —
Escherichia coli ECRC98 0.22 JDDGAC_01960 cfa cyclopropane fatty acyl phospholipid synthase 0.26 JDDGAC_30305 gspF type II secretion system inner membrane protein GspF low > 86
Escherichia coli ECRC102 0.22 NIAGMN_00695 cfa cyclopropane fatty acyl phospholipid synthase 0.26 NIAGMN_28595 gspF type II secretion system inner membrane protein GspF — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF3615 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) 0.19 GFF133 Type IV fimbrial assembly protein PilC low > 78
Pantoea sp. MT58 0.22 IAI47_10810 cyclopropane fatty acyl phospholipid synthase 0.20 IAI47_15860 protein transport protein HofC low > 76
Dickeya dadantii 3937 0.21 DDA3937_RS07210 cyclopropane fatty acyl phospholipid synthase 0.26 DDA3937_RS14790 type II secretion system inner membrane protein GspF low > 74

Not shown: 10 genomes with orthologs for HSERO_RS03400 only; 21 genomes with orthologs for HSERO_RS01765 only