| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS16300 | | sigma E protease regulator RseP | 1.0 | HER17_RS16525 | | exodeoxyribonuclease V subunit beta | 0.70 | 6 |
| Dickeya dadantii 3937 | 0.81 | DDA3937_RS05150 | | sigma E protease regulator RseP | 0.31 | DDA3937_RS11080 | | exodeoxyribonuclease V subunit beta | low | > 74 |
| Dickeya dianthicola 67-19 | 0.81 | HGI48_RS05150 | | sigma E protease regulator RseP | 0.32 | HGI48_RS11100 | | exodeoxyribonuclease V subunit beta | — | — |
| Serratia liquefaciens MT49 | 0.80 | IAI46_20225 | | sigma E protease regulator RseP | 0.67 | IAI46_20405 | | exodeoxyribonuclease V subunit beta | — | — |
| Dickeya dianthicola ME23 | 0.79 | DZA65_RS05490 | | sigma E protease regulator RseP | 0.31 | DZA65_RS11480 | | exodeoxyribonuclease V subunit beta | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.79 | GFF46 | | Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage | 0.60 | GFF1301 | | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) | — | — |
| Rahnella sp. WP5 | 0.79 | EX31_RS13000 | | sigma E protease regulator RseP | 0.31 | EX31_RS20735 | | exodeoxyribonuclease V subunit beta | — | — |
| Enterobacter asburiae PDN3 | 0.78 | EX28DRAFT_3764 | | RIP metalloprotease RseP | 0.59 | EX28DRAFT_2895 | | DNA helicase/exodeoxyribonuclease V, beta subunit (EC 3.1.11.5) | — | — |
| Enterobacter sp. TBS_079 | 0.78 | MPMX20_00860 | | Regulator of sigma-E protease RseP | 0.59 | MPMX20_03683 | | RecBCD enzyme subunit RecB | — | — |
| Klebsiella michiganensis M5al | 0.77 | BWI76_RS05250 | | zinc metallopeptidase RseP | 0.60 | BWI76_RS23230 | | exodeoxyribonuclease V subunit beta | — | — |
| Pantoea sp. MT58 | 0.76 | IAI47_15495 | | sigma E protease regulator RseP | 0.59 | IAI47_03965 | | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli ECRC62 | 0.75 | BNILDI_09150 | rseP | sigma E protease regulator RseP | 0.60 | BNILDI_10415 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.75 | OHPLBJKB_03487 | | Regulator of sigma-E protease RseP | 0.60 | OHPLBJKB_00910 | | RecBCD enzyme subunit RecB | — | — |
| Escherichia coli ECOR27 | 0.75 | NOLOHH_02520 | rseP | sigma E protease regulator RseP | 0.60 | NOLOHH_11935 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli ECRC99 | 0.75 | KEDOAH_17980 | rseP | sigma E protease regulator RseP | 0.60 | KEDOAH_08080 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli ECRC102 | 0.75 | NIAGMN_08025 | rseP | sigma E protease regulator RseP | 0.60 | NIAGMN_17820 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli BW25113 | 0.75 | b0176 | yaeL | zinc metallopeptidase (NCBI) | 0.60 | b2820 | recB | exonuclease V (RecBCD complex), beta subunit (NCBI) | — | — |
| Escherichia coli ECOR38 | 0.75 | HEPCGN_08130 | rseP | sigma E protease regulator RseP | 0.60 | HEPCGN_19305 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli Nissle 1917 | 0.75 | ECOLIN_RS00960 | | sigma E protease regulator RseP | 0.60 | ECOLIN_RS15830 | | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli ECRC98 | 0.75 | JDDGAC_13770 | rseP | sigma E protease regulator RseP | 0.60 | JDDGAC_23715 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia coli BL21 | 0.75 | ECD_00174 | | inner membrane zinc RIP metalloprotease; RpoE activator, by degrading RseA; cleaved signal peptide endoprotease | 0.60 | ECD_02668 | | exonuclease V (RecBCD complex), beta subunit | — | — |
| Escherichia coli ECRC101 | 0.75 | MCAODC_00690 | rseP | sigma E protease regulator RseP | 0.60 | MCAODC_10575 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Escherichia fergusonii Becca | 0.75 | EFB2_03868 | | Regulator of sigma-E protease RseP | 0.60 | EFB2_01064 | | RecBCD enzyme subunit RecB | — | — |
| Escherichia coli ECRC100 | 0.75 | OKFHMN_10175 | rseP | sigma E protease regulator RseP | 0.60 | OKFHMN_20050 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Erwinia tracheiphila SCR3 | 0.73 | LU632_RS19930 | rseP | sigma E protease regulator RseP | 0.59 | LU632_RS06190 | recB | exodeoxyribonuclease V subunit beta | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.57 | CSW01_11475 | | zinc metalloprotease | 0.41 | CSW01_11780 | | exodeoxyribonuclease V subunit beta | — | — |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_2808 | | peptidase RseP (RefSeq) | 0.29 | Shewana3_2246 | | exodeoxyribonuclease V, beta subunit (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.54 | SO1636 | | membrane-associated zinc metalloprotease, putative (NCBI ptt file) | 0.28 | SO2148 | recB | exodeoxyribonuclease V, beta subunit (NCBI ptt file) | — | — |
| Shewanella loihica PV-4 | 0.53 | Shew_2628 | | putative membrane-associated zinc metalloprotease (RefSeq) | 0.31 | Shew_2130 | | exodeoxyribonuclease V, beta subunit (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.52 | Sama_1146 | | membrane-associated zinc metalloprotease, putative (RefSeq) | 0.29 | Sama_1901 | | exodeoxyribonuclease V, beta subunit (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.51 | MIT1002_01011 | | Regulator of sigma E protease | 0.20 | MIT1002_02360 | | Exodeoxyribonuclease V beta chain | — | — |
| Pseudomonas simiae WCS417 | 0.43 | PS417_06245 | | zinc metallopeptidase RseP | 0.32 | PS417_23775 | | exodeoxyribonuclease V subunit beta | low | > 88 |
| Pseudomonas sp. S08-1 | 0.42 | OH686_06450 | | RIP metalloprotease RseP | 0.21 | OH686_12075 | | Exodeoxyribonuclease V beta chain | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.42 | PFLU_RS06310 | | sigma E protease regulator RseP | 0.32 | PFLU_RS25590 | | exodeoxyribonuclease V subunit beta | — | — |
| Pseudomonas fluorescens SBW25 | 0.42 | PFLU_RS06310 | | sigma E protease regulator RseP | 0.32 | PFLU_RS25590 | | exodeoxyribonuclease V subunit beta | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_1350 | | site-2 protease, Metallo peptidase, MEROPS family M50B | 0.31 | Psyr_0681 | | DNA helicase/exodeoxyribonuclease V, beta subunit | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_1350 | | site-2 protease, Metallo peptidase, MEROPS family M50B | 0.31 | Psyr_0681 | | DNA helicase/exodeoxyribonuclease V, beta subunit | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.42 | AO353_16495 | | zinc metallopeptidase RseP | 0.32 | AO353_06045 | | exodeoxyribonuclease V subunit beta | low | > 101 |
| Pseudomonas putida KT2440 | 0.42 | PP_1598 | | regulatory intramembrane protein RIP zinc protease | 0.31 | PP_4673 | | Chi activated ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease | — | — |
| Marinobacter adhaerens HP15 | 0.41 | HP15_1173 | | membrane-associated zinc metalloprotease | 0.27 | HP15_3713 | | exodeoxyribonuclease V, beta subunit | — | — |
| Pseudomonas sp. RS175 | 0.41 | PFR28_00403 | | Regulator of sigma-E protease RseP | 0.31 | PFR28_00007 | | RecBCD enzyme subunit RecB | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.41 | Psest_2835 | | RIP metalloprotease RseP | 0.25 | Psest_0213 | | exodeoxyribonuclease V, beta subunit | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.41 | Pf1N1B4_3091 | | Membrane-associated zinc metalloprotease | 0.32 | Pf1N1B4_1235 | | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.41 | PfGW456L13_4701 | | Membrane-associated zinc metalloprotease | 0.32 | PfGW456L13_5151 | | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.41 | AO356_06005 | | zinc metallopeptidase RseP | 0.31 | AO356_07915 | | exodeoxyribonuclease V subunit beta | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.40 | Pf6N2E2_3062 | | Membrane-associated zinc metalloprotease | 0.32 | Pf6N2E2_3460 | | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) | low | > 103 |
| Acinetobacter radioresistens SK82 | 0.37 | MPMX26_01300 | | Regulator of sigma-E protease RseP | 0.11 | MPMX26_00272 | | RecBCD enzyme subunit RecB | low | > 36 |
| Rhodanobacter sp. FW510-T8 | 0.36 | OKGIIK_10175 | rseP | RIP metalloprotease RseP | 0.16 | OKGIIK_09230 | | RecBCD enzyme subunit RecB | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.36 | LRK54_RS03290 | | RIP metalloprotease RseP | 0.15 | LRK54_RS02180 | | UvrD-helicase domain-containing protein | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.35 | LRK55_RS03040 | | RIP metalloprotease RseP | 0.15 | LRK55_RS01930 | | UvrD-helicase domain-containing protein | — | — |
| Lysobacter sp. OAE881 | 0.35 | ABIE51_RS06905 | | RIP metalloprotease RseP | 0.20 | ABIE51_RS01025 | | exodeoxyribonuclease V subunit beta | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.34 | ABZR86_RS21620 | | RIP metalloprotease RseP | 0.29 | ABZR86_RS07665 | | exodeoxyribonuclease V subunit beta | — | — |
| Castellaniella sp019104865 MT123 | 0.34 | ABCV34_RS04075 | | RIP metalloprotease RseP | 0.25 | ABCV34_RS02965 | | exodeoxyribonuclease V subunit beta | low | > 48 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.33 | H281DRAFT_00617 | | site-2 protease. Metallo peptidase. MEROPS family M50B | 0.20 | H281DRAFT_05086 | | DNA helicase/exodeoxyribonuclease V, beta subunit | — | — |
| Burkholderia phytofirmans PsJN | 0.32 | BPHYT_RS12105 | | zinc metalloprotease | 0.21 | BPHYT_RS07975 | | exodeoxyribonuclease V subunit beta | — | — |
| Paraburkholderia graminis OAS925 | 0.31 | ABIE53_002496 | | regulator of sigma E protease | 0.28 | ABIE53_000495 | | exodeoxyribonuclease V beta subunit | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.31 | QEN71_RS06455 | | RIP metalloprotease RseP | 0.20 | QEN71_RS23190 | | exodeoxyribonuclease V subunit beta | low | > 153 |
Not shown: 27 genomes with orthologs for HER17_RS16300 only; 0 genomes with orthologs for HER17_RS16525 only