Conservation of cofitness between HER17_RS04200 and HER17_RS15940 in Pectobacterium carotovorum WPP14

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04200 7-carboxy-7-deazaguanine synthase QueE 1.0 HER17_RS15940 phosphatidylglycerophosphatase A 0.64 18
Serratia liquefaciens MT49 0.86 IAI46_03675 7-carboxy-7-deazaguanine synthase QueE 0.77 IAI46_04915 phosphatidylglycerophosphatase A low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF4831 Queuosine Biosynthesis QueE Radical SAM 0.79 GFF4322 Phosphatidylglycerophosphatase A (EC 3.1.3.27) low > 78
Dickeya dadantii 3937 0.86 DDA3937_RS16970 7-carboxy-7-deazaguanine synthase QueE 0.73 DDA3937_RS05525 phosphatidylglycerophosphatase A — —
Klebsiella michiganensis M5al 0.85 BWI76_RS22780 7-carboxy-7-deazaguanine synthase QueE 0.77 BWI76_RS06370 phosphatidylglycerophosphatase A low > 92
Escherichia coli ECRC62 0.85 BNILDI_10675 queE 7-carboxy-7-deazaguanine synthase QueE 0.79 BNILDI_22795 pgpA phosphatidylglycerophosphatase A low > 75
Escherichia coli BW25113 0.85 b2777 ygcF hypothetical protein (NCBI) 0.80 b0418 pgpA phosphatidylglycerophosphatase A (NCBI) low > 76
Escherichia coli ECRC101 0.85 MCAODC_10825 queE 7-carboxy-7-deazaguanine synthase QueE 0.79 MCAODC_27660 pgpA phosphatidylglycerophosphatase A low > 87
Escherichia coli BL21 0.85 ECD_02622 7-carboxy-7-deazaguanine synthase; queosine biosynthesis 0.80 ECD_00366 phosphatidylglycerophosphatase A low > 61
Escherichia coli ECRC99 0.85 KEDOAH_07830 queE 7-carboxy-7-deazaguanine synthase QueE 0.79 KEDOAH_19530 pgpA phosphatidylglycerophosphatase A — —
Escherichia coli ECRC100 0.85 OKFHMN_20300 queE 7-carboxy-7-deazaguanine synthase QueE 0.79 OKFHMN_08435 pgpA phosphatidylglycerophosphatase A — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_00957 7-carboxy-7-deazaguanine synthase 0.80 OHPLBJKB_03258 Phosphatidylglycerophosphatase A low > 73
Escherichia coli ECRC102 0.85 NIAGMN_18070 queE 7-carboxy-7-deazaguanine synthase QueE 0.79 NIAGMN_06490 pgpA phosphatidylglycerophosphatase A — —
Escherichia coli ECRC98 0.85 JDDGAC_23965 queE 7-carboxy-7-deazaguanine synthase QueE 0.79 JDDGAC_12090 pgpA phosphatidylglycerophosphatase A low > 86
Escherichia coli ECOR27 0.85 NOLOHH_12170 queE 7-carboxy-7-deazaguanine synthase QueE 0.80 NOLOHH_01380 pgpA phosphatidylglycerophosphatase A low > 75
Escherichia coli ECOR38 0.85 HEPCGN_19205 queE 7-carboxy-7-deazaguanine synthase QueE 0.80 HEPCGN_07060 pgpA phosphatidylglycerophosphatase A low > 87
Escherichia coli Nissle 1917 0.85 ECOLIN_RS15475 7-carboxy-7-deazaguanine synthase QueE 0.79 ECOLIN_RS02525 phosphatidylglycerophosphatase A — —
Escherichia fergusonii Becca 0.85 EFB2_01141 7-carboxy-7-deazaguanine synthase 0.79 EFB2_03639 Phosphatidylglycerophosphatase A 0.42 26
Erwinia tracheiphila SCR3 0.84 LU632_RS06390 queE 7-carboxy-7-deazaguanine synthase QueE 0.70 LU632_RS18615 pgpA phosphatidylglycerophosphatase A low > 74
Rahnella sp. WP5 0.83 EX31_RS07920 7-carboxy-7-deazaguanine synthase QueE 0.71 EX31_RS22145 phosphatidylglycerophosphatase A low > 89
Pantoea sp. MT58 0.80 IAI47_04140 7-carboxy-7-deazaguanine synthase QueE 0.74 IAI47_14750 phosphatidylglycerophosphatase A low > 76
Dickeya dianthicola ME23 0.79 DZA65_RS18110 7-carboxy-7-deazaguanine synthase QueE 0.70 DZA65_RS05910 phosphatidylglycerophosphatase A — —
Dickeya dianthicola 67-19 0.79 HGI48_RS17035 7-carboxy-7-deazaguanine synthase QueE 0.71 HGI48_RS05585 phosphatidylglycerophosphatase A — —
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_06870 7-carboxy-7-deazaguanine synthase QueE 0.51 CSW01_11530 phosphatidylglycerophosphatase A — —
Shewanella sp. ANA-3 0.61 Shewana3_2163 radical activating enzyme (RefSeq) 0.43 Shewana3_1102 phosphatidylglycerophosphatase (RefSeq) — —
Shewanella loihica PV-4 0.61 Shew_2061 radical SAM domain-containing protein (RefSeq) 0.48 Shew_1193 phosphatidylglycerophosphatase (RefSeq) — —
Shewanella oneidensis MR-1 0.60 SO2501 radical activating enzyme (NCBI ptt file) 0.45 SO3463 pgpA phosphatidylglycerophosphatase A (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.58 MIT1002_01264 7-carboxy-7-deazaguanine synthase 0.45 MIT1002_02694 Phosphatidylglycerophosphatase A — —
Shewanella amazonensis SB2B 0.58 Sama_1825 radical activating enzyme (RefSeq) 0.43 Sama_1022 phosphatidylglycerophosphatase (RefSeq) low > 62
Bacteroides ovatus ATCC 8483 0.22 BACOVA_05261 radical SAM domain protein 0.25 BACOVA_04260 phosphatidylglycerophosphatase A low > 94
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS01505 7-cyano-7-deazaguanine reductase 0.29 BPHYT_RS16890 phosphatidylglycerophosphatase — —
Bacteroides stercoris CC31F 0.21 HMPREF1181_RS13885 radical SAM protein 0.24 HMPREF1181_RS04810 phosphatidylglycerophosphatase A low > 56
Paraburkholderia graminis OAS925 0.21 ABIE53_000397 7-carboxy-7-deazaguanine synthase 0.30 ABIE53_003545 phosphatidylglycerophosphatase A — —
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_02231 7-carboxy-7-deazaguanine synthase, Cx14CxxC type 0.30 H281DRAFT_06306 phosphatidylglycerophosphatase A — —
Magnetospirillum magneticum AMB-1 0.20 AMB_RS01255 7-carboxy-7-deazaguanine synthase 0.28 AMB_RS12825 phosphatidylglycerophosphatase A low > 64
Rhodospirillum rubrum S1H 0.19 Rru_A1959 Radical SAM (NCBI) 0.24 Rru_A1869 Phosphatidylglycerophosphatase A (NCBI) — —
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS12145 7-carboxy-7-deazaguanine synthase 0.31 ABZR87_RS01575 phosphatidylglycerophosphatase A — —
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS11390 7-cyano-7-deazaguanine reductase 0.30 RR42_RS17620 phosphatidylglycerophosphatase — —
Herbaspirillum seropedicae SmR1 0.18 HSERO_RS11035 7-cyano-7-deazaguanine reductase 0.24 HSERO_RS16835 phosphatidylglycerophosphatase low > 78
Parabacteroides merdae CL09T00C40 0.18 HMPREF1078_RS00750 radical SAM protein 0.22 HMPREF1078_RS00565 phosphatidylglycerophosphatase A low > 61
Ralstonia solanacearum GMI1000 0.17 RS_RS07295 7-carboxy-7-deazaguanine synthase 0.29 RS_RS13855 phosphatidylglycerophosphatase A — —
Ralstonia solanacearum PSI07 0.17 RPSI07_RS16890 7-carboxy-7-deazaguanine synthase 0.31 RPSI07_RS11335 phosphatidylglycerophosphatase A — —
Pseudomonas sp. RS175 0.17 PFR28_03404 7-carboxy-7-deazaguanine synthase 0.42 PFR28_03943 Phosphatidylglycerophosphatase A — —
Ralstonia solanacearum UW163 0.17 UW163_RS13945 7-carboxy-7-deazaguanine synthase 0.30 UW163_RS07715 phosphatidylglycerophosphatase A — —
Ralstonia solanacearum IBSBF1503 0.17 RALBFv3_RS00615 7-carboxy-7-deazaguanine synthase 0.30 RALBFv3_RS05910 phosphatidylglycerophosphatase A — —
Pseudomonas fluorescens FW300-N2C3 0.17 AO356_18065 7-carboxy-7-deazaguanine synthase 0.43 AO356_14960 phosphatidylglycerophosphatase — —
Pseudomonas fluorescens FW300-N2E2 0.17 Pf6N2E2_5545 Queuosine Biosynthesis QueE Radical SAM 0.43 Pf6N2E2_4925 Phosphatidylglycerophosphatase A (EC 3.1.3.27) — —
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_629 Queuosine Biosynthesis QueE Radical SAM 0.42 Pf1N1B4_2655 Phosphatidylglycerophosphatase A (EC 3.1.3.27) — —
Variovorax sp. SCN45 0.17 GFF2577 7-carboxy-7-deazaguanine synthase (EC 4.3.99.3) 0.24 GFF6271 Phosphatidylglycerophosphatase A (EC 3.1.3.27) — —
Pseudomonas fluorescens FW300-N2E3 0.17 AO353_03540 7-carboxy-7-deazaguanine synthase 0.42 AO353_06685 phosphatidylglycerophosphatase — —
Pseudomonas sp. S08-1 0.17 OH686_19175 7-carboxy-7-deazaguanine synthase 0.45 OH686_15725 Phosphatidylglycerophosphatase A — —
Rhodanobacter sp. FW510-T8 0.16 OKGIIK_01890 7-carboxy-7-deazaguanine synthase 0.36 OKGIIK_11390 pgpA Phosphatidylglycerophosphatase A low > 52
Acidovorax sp. GW101-3H11 0.16 Ac3H11_3825 Queuosine Biosynthesis QueE Radical SAM 0.25 Ac3H11_739 Phosphatidylglycerophosphatase A (EC 3.1.3.27) — —
Variovorax sp. OAS795 0.16 ABID97_RS07425 7-carboxy-7-deazaguanine synthase 0.24 ABID97_RS04860 phosphatidylglycerophosphatase A — —
Pseudomonas putida KT2440 0.16 PP_1225 7-carboxy-7-deazaguanine synthase 0.44 PP_0520 phosphatidylglycerophosphatase A — —
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_1861 Queuosine Biosynthesis QueE Radical SAM 0.43 PfGW456L13_1319 Phosphatidylglycerophosphatase A (EC 3.1.3.27) — —
Pseudomonas stutzeri RCH2 0.15 Psest_1505 Organic radical activating enzymes 0.43 Psest_3546 Phosphatidylglycerophosphatase A and related proteins low > 67
Hydrogenophaga sp. GW460-11-11-14-LB1 0.15 GFF4633 Queuosine Biosynthesis QueE Radical SAM 0.23 GFF3092 Phosphatidylglycerophosphatase A (EC 3.1.3.27) — —
Marinobacter adhaerens HP15 0.15 HP15_3815 organic radical activating enzyme 0.43 HP15_497 phosphatidylglycerophosphatase A — —

Not shown: 25 genomes with orthologs for HER17_RS04200 only; 6 genomes with orthologs for HER17_RS15940 only