Conservation of cofitness between HER17_RS01910 and HER17_RS10870 in Pectobacterium carotovorum WPP14

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS01910 aspartate aminotransferase family protein 1.0 HER17_RS10870 HTH-type transcriptional regulator CysB 0.77 19
Dickeya dadantii 3937 0.86 DDA3937_RS19450 aspartate aminotransferase family protein 0.95 DDA3937_RS10540 HTH-type transcriptional regulator CysB low > 74
Dickeya dianthicola 67-19 0.86 HGI48_RS19570 aspartate aminotransferase family protein 0.95 HGI48_RS10540 HTH-type transcriptional regulator CysB low > 71
Dickeya dianthicola ME23 0.86 DZA65_RS20655 aspartate aminotransferase family protein 0.95 DZA65_RS11020 HTH-type transcriptional regulator CysB low > 75
Serratia liquefaciens MT49 0.82 IAI46_23590 aspartate aminotransferase family protein 0.93 IAI46_13965 HTH-type transcriptional regulator CysB
Klebsiella michiganensis M5al 0.80 BWI76_RS26000 aspartate aminotransferase family protein 0.92 BWI76_RS11930 LysR family transcriptional regulator CysB
Rahnella sp. WP5 0.79 EX31_RS04630 aspartate aminotransferase family protein 0.93 EX31_RS09890 HTH-type transcriptional regulator CysB 0.83 59
Escherichia coli BW25113 0.79 b3359 argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase (NCBI) 0.91 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI)
Pantoea sp. MT58 0.79 IAI47_01955 aspartate aminotransferase family protein 0.90 IAI47_09240 HTH-type transcriptional regulator CysB low > 76
Escherichia coli BL21 0.79 ECD_03210 bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase 0.91 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor
Escherichia coli ECOR27 0.79 NOLOHH_09030 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.91 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB
Enterobacter sp. TBS_079 0.79 MPMX20_04262 Acetylornithine/succinyldiaminopimelate aminotransferase 0.91 MPMX20_02501 HTH-type transcriptional regulator CysB
Escherichia fergusonii Becca 0.79 EFB2_00463 Acetylornithine/succinyldiaminopimelate aminotransferase 0.91 EFB2_02652 HTH-type transcriptional regulator CysB
Escherichia coli ECRC62 0.78 BNILDI_02490 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.91 BNILDI_18415 cysB HTH-type transcriptional regulator CysB
Escherichia coli ECOR38 0.78 HEPCGN_16055 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.91 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB 0.76 2
Escherichia coli Nissle 1917 0.78 ECOLIN_RS19240 bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.91 ECOLIN_RS07680 HTH-type transcriptional regulator CysB low > 55
Escherichia coli ECRC102 0.78 NIAGMN_15000 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.91 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB
Escherichia coli ECRC99 0.78 KEDOAH_10910 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.91 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB
Escherichia coli ECRC101 0.78 MCAODC_07760 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.91 MCAODC_15665 cysB HTH-type transcriptional regulator CysB
Escherichia coli ECRC100 0.78 OKFHMN_17230 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.91 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB
Escherichia coli ECRC98 0.78 JDDGAC_20860 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.91 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3710 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) 0.91 GFF2712 Cys regulon transcriptional activator CysB
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_00343 Acetylornithine/succinyldiaminopimelate aminotransferase 0.91 OHPLBJKB_02409 HTH-type transcriptional regulator CysB low > 73
Enterobacter asburiae PDN3 0.78 EX28DRAFT_4170 transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family 0.91 EX28DRAFT_0946 Transcriptional regulator
Erwinia tracheiphila SCR3 0.77 LU632_RS22810 aspartate aminotransferase family protein 0.92 LU632_RS12550 cysB HTH-type transcriptional regulator CysB
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.32 64
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein low > 86
Pseudomonas sp. S08-1 0.67 OH686_21290 Succinylornithine transaminase 0.67 OH686_01730 Cys regulon transcriptional activator CysB low > 80
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_5665 Succinylornithine transaminase (EC 2.6.1.81) 0.67 Pf6N2E2_2465 Cys regulon transcriptional activator CysB low > 103
Pseudomonas putida KT2440 0.67 PP_4481 Succinylornithine transaminase/acetylornithine aminotransferase 0.68 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 0.26 34
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_18725 acetylornithine aminotransferase 0.67 AO356_03180 CysB family transcriptional regulator low > 104
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_1971 Succinylornithine transaminase (EC 2.6.1.81) 0.68 PfGW456L13_2230 Cys regulon transcriptional activator CysB low > 87
Pseudomonas simiae WCS417 0.66 PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.68 PS417_08460 CysB family transcriptional regulator
Pseudomonas stutzeri RCH2 0.66 Psest_2719 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family 0.66 Psest_2329 Transcriptional regulator 0.39 35
Pseudomonas fluorescens SBW25 0.66 PFLU_RS23315 aspartate aminotransferase family protein 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS23315 aspartate aminotransferase family protein 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_3440 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.67 Pf1N1B4_283 Cys regulon transcriptional activator CysB
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_03025 acetylornithine aminotransferase 0.67 AO353_19060 CysB family transcriptional regulator low > 101
Shewanella loihica PV-4 0.65 Shew_0578 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.75 Shew_1624 cysB transcriptional regulator CysB (RefSeq)
Pseudomonas sp. RS175 0.65 PFR28_03283 Succinylornithine transaminase/acetylornithine aminotransferase 0.67 PFR28_00966 HTH-type transcriptional regulator CysB low > 88
Shewanella oneidensis MR-1 0.65 SO0617 argD acetylornithine aminotransferase (NCBI ptt file) 0.75 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.65 MIT1002_00437 Succinylornithine transaminase/acetylornithine aminotransferase 0.78 MIT1002_02005 Cys regulon transcriptional activator
Shewanella amazonensis SB2B 0.65 Sama_3011 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.75 Sama_1324 cysB transcriptional regulator CysB (RefSeq)
Shewanella sp. ANA-3 0.65 Shewana3_0610 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.75 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_13250 aspartate aminotransferase family protein 0.80 CSW01_09545 HTH-type transcriptional regulator CysB
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_2221 acetylornithine and succinylornithine transaminases/succinylornithine transaminase family 0.43 B158DRAFT_2455 Transcriptional regulator low > 40
Marinobacter adhaerens HP15 0.60 HP15_3042 acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) (from data) 0.68 HP15_1854 transcriptional regulator, LysR family
Lysobacter sp. OAE881 0.48 ABIE51_RS17420 acetylornithine/succinyldiaminopimelate transaminase 0.34 ABIE51_RS15850 LysR family transcriptional regulator 0.82 36
Rhodanobacter denitrificans MT42 0.46 LRK55_RS06335 acetylornithine/succinylornithine family transaminase 0.36 LRK55_RS00690 LysR substrate-binding domain-containing protein low > 63
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS17400 acetylornithine transaminase 0.35 ABZR86_RS05885 LysR substrate-binding domain-containing protein low > 74
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_17070 astC acetylornithine transaminase 0.37 OKGIIK_05975 lysR CysB family transcriptional regulator low > 52
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1117.1 hypothetical protein 0.30 Xcc-8004.1249.1 Transcriptional regulator 0.57 33
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS06590 acetylornithine/succinylornithine family transaminase 0.36 LRK54_RS00915 LysR substrate-binding domain-containing protein low > 59
Dechlorosoma suillum PS 0.35 Dsui_0023 acetylornithine/succinylornithine aminotransferase 0.52 Dsui_1988 transcriptional regulator
Castellaniella sp019104865 MT123 0.33 ABCV34_RS12095 acetylornithine transaminase 0.40 ABCV34_RS08230 CysB family HTH-type transcriptional regulator
Acidovorax sp. GW101-3H11 0.33 Ac3H11_1332 Acetylornithine aminotransferase (EC 2.6.1.11) 0.40 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI
Variovorax sp. OAS795 0.31 ABID97_RS08635 aspartate aminotransferase family protein 0.43 ABID97_RS16600 CysB family HTH-type transcriptional regulator
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF3420 Acetylornithine aminotransferase (EC 2.6.1.11) 0.46 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI low > 90
Variovorax sp. SCN45 0.31 GFF3927 N-acetylornithine aminotransferase (EC 2.6.1.11) 0.43 GFF244 Cys regulon transcriptional activator CysB
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS15500 aspartate aminotransferase family protein 0.16 ABZR88_RS05415 LysR substrate-binding domain-containing protein

Not shown: 41 genomes with orthologs for HER17_RS01910 only; 0 genomes with orthologs for HER17_RS10870 only