Conservation of cofitness between HER17_RS10870 and HER17_RS04705 in Pectobacterium carotovorum WPP14

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10870 HTH-type transcriptional regulator CysB 1.0 HER17_RS04705 glutamate-5-semialdehyde dehydrogenase 0.94 18
Dickeya dadantii 3937 0.95 DDA3937_RS10540 HTH-type transcriptional regulator CysB 0.83 DDA3937_RS16530 glutamate-5-semialdehyde dehydrogenase low > 74
Dickeya dianthicola ME23 0.95 DZA65_RS11020 HTH-type transcriptional regulator CysB 0.81 DZA65_RS17690 glutamate-5-semialdehyde dehydrogenase low > 75
Dickeya dianthicola 67-19 0.95 HGI48_RS10540 HTH-type transcriptional regulator CysB 0.86 HGI48_RS16600 glutamate-5-semialdehyde dehydrogenase low > 71
Serratia liquefaciens MT49 0.93 IAI46_13965 HTH-type transcriptional regulator CysB 0.83 IAI46_04435 glutamate-5-semialdehyde dehydrogenase — —
Rahnella sp. WP5 0.93 EX31_RS09890 HTH-type transcriptional regulator CysB 0.82 EX31_RS20975 glutamate-5-semialdehyde dehydrogenase 0.95 30
Klebsiella michiganensis M5al 0.92 BWI76_RS11930 LysR family transcriptional regulator CysB 0.77 BWI76_RS05835 gamma-glutamyl-phosphate reductase — —
Erwinia tracheiphila SCR3 0.92 LU632_RS12550 cysB HTH-type transcriptional regulator CysB 0.75 LU632_RS01190 proA glutamate-5-semialdehyde dehydrogenase — —
Escherichia coli ECOR38 0.91 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB 0.75 HEPCGN_07775 proA glutamate-5-semialdehyde dehydrogenase low > 87
Enterobacter sp. TBS_079 0.91 MPMX20_02501 HTH-type transcriptional regulator CysB 0.77 MPMX20_00928 Gamma-glutamyl phosphate reductase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_02409 HTH-type transcriptional regulator CysB 0.75 OHPLBJKB_03397 Gamma-glutamyl phosphate reductase low > 73
Escherichia coli Nissle 1917 0.91 ECOLIN_RS07680 HTH-type transcriptional regulator CysB 0.75 ECOLIN_RS01830 glutamate-5-semialdehyde dehydrogenase 0.55 8
Escherichia coli ECRC101 0.91 MCAODC_15665 cysB HTH-type transcriptional regulator CysB 0.76 MCAODC_00190 proA glutamate-5-semialdehyde dehydrogenase — —
Escherichia coli ECOR27 0.91 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB 0.75 NOLOHH_02045 proA glutamate-5-semialdehyde dehydrogenase — —
Escherichia coli BW25113 0.91 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) 0.75 b0243 proA gamma-glutamyl phosphate reductase (NCBI) — —
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0946 Transcriptional regulator 0.78 EX28DRAFT_2650 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) — —
Escherichia coli BL21 0.91 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor 0.76 ECD_00240 gamma-glutamylphosphate reductase — —
Escherichia coli ECRC99 0.91 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB 0.76 KEDOAH_18485 proA glutamate-5-semialdehyde dehydrogenase — —
Escherichia fergusonii Becca 0.91 EFB2_02652 HTH-type transcriptional regulator CysB 0.74 EFB2_03777 Gamma-glutamyl phosphate reductase — —
Escherichia coli ECRC98 0.91 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB 0.76 JDDGAC_13295 proA glutamate-5-semialdehyde dehydrogenase — —
Escherichia coli ECRC62 0.91 BNILDI_18415 cysB HTH-type transcriptional regulator CysB 0.75 BNILDI_00240 proA glutamate-5-semialdehyde dehydrogenase — —
Escherichia coli ECRC102 0.91 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB 0.76 NIAGMN_07530 proA glutamate-5-semialdehyde dehydrogenase — —
Escherichia coli ECRC100 0.91 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB 0.76 OKFHMN_09670 proA glutamate-5-semialdehyde dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2712 Cys regulon transcriptional activator CysB 0.74 GFF4115 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) — —
Pantoea sp. MT58 0.90 IAI47_09240 HTH-type transcriptional regulator CysB 0.76 IAI47_15115 glutamate-5-semialdehyde dehydrogenase 0.66 46
Vibrio cholerae E7946 ATCC 55056 0.80 CSW01_09545 HTH-type transcriptional regulator CysB 0.62 CSW01_11570 glutamate-5-semialdehyde dehydrogenase — —
Alteromonas macleodii MIT1002 0.78 MIT1002_02005 Cys regulon transcriptional activator 0.40 MIT1002_01885 Gamma-glutamyl phosphate reductase — —
Shewanella amazonensis SB2B 0.75 Sama_1324 cysB transcriptional regulator CysB (RefSeq) 0.50 Sama_2515 proA gamma-glutamyl phosphate reductase (RefSeq) — —
Shewanella oneidensis MR-1 0.75 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) 0.53 SO1122 proA gamma-glutamyl phosphate reductase (NCBI ptt file) 0.83 25
Shewanella loihica PV-4 0.75 Shew_1624 cysB transcriptional regulator CysB (RefSeq) 0.57 Shew_2847 proA gamma-glutamyl phosphate reductase (RefSeq) — —
Shewanella sp. ANA-3 0.75 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) 0.54 Shewana3_0955 proA gamma-glutamyl phosphate reductase (RefSeq) — —
Pseudomonas putida KT2440 0.68 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 0.42 PP_4811 Gamma-glutamyl phosphate reductase low > 96
Marinobacter adhaerens HP15 0.68 HP15_1854 transcriptional regulator, LysR family 0.43 HP15_601 gamma-glutamyl phosphate reductase — —
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_2230 Cys regulon transcriptional activator CysB 0.40 PfGW456L13_1356 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 87
Pseudomonas simiae WCS417 0.68 PS417_08460 CysB family transcriptional regulator 0.43 PS417_24745 gamma-glutamyl phosphate reductase — —
Pseudomonas sp. S08-1 0.67 OH686_01730 Cys regulon transcriptional activator CysB 0.44 OH686_09340 Gamma-glutamyl phosphate reductase low > 80
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_283 Cys regulon transcriptional activator CysB 0.41 Pf1N1B4_2688 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) — —
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_19060 CysB family transcriptional regulator 0.41 AO353_06495 gamma-glutamyl phosphate reductase 0.56 56
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_2465 Cys regulon transcriptional activator CysB 0.40 Pf6N2E2_4993 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 103
Pseudomonas fluorescens SBW25 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.43 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.43 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_03180 CysB family transcriptional regulator 0.40 AO356_15290 gamma-glutamyl phosphate reductase low > 104
Pseudomonas sp. RS175 0.67 PFR28_00966 HTH-type transcriptional regulator CysB 0.40 PFR28_03872 Gamma-glutamyl phosphate reductase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.42 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 0.73 15
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.42 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 0.82 11
Pseudomonas stutzeri RCH2 0.66 Psest_2329 Transcriptional regulator 0.44 Psest_0508 gamma-glutamyl phosphate reductase 0.75 4
Dechlorosoma suillum PS 0.52 Dsui_1988 transcriptional regulator 0.41 Dsui_1220 gamma-glutamyl phosphate reductase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI 0.39 GFF2641 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 90
Variovorax sp. SCN45 0.43 GFF244 Cys regulon transcriptional activator CysB 0.40 GFF6326 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 127
Variovorax sp. OAS795 0.43 ABID97_RS16600 CysB family HTH-type transcriptional regulator 0.39 ABID97_RS04600 glutamate-5-semialdehyde dehydrogenase — —
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_2455 Transcriptional regulator 0.39 B158DRAFT_1470 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) low > 40
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI 0.40 Ac3H11_704 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) low > 79
Castellaniella sp019104865 MT123 0.40 ABCV34_RS08230 CysB family HTH-type transcriptional regulator 0.41 ABCV34_RS00845 glutamate-5-semialdehyde dehydrogenase — —
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_05975 lysR CysB family transcriptional regulator 0.36 OKGIIK_09415 proA glutamate-5-semialdehyde dehydrogenase low > 52
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS00915 LysR substrate-binding domain-containing protein 0.37 LRK54_RS02370 glutamate-5-semialdehyde dehydrogenase 0.76 9
Rhodanobacter denitrificans MT42 0.36 LRK55_RS00690 LysR substrate-binding domain-containing protein 0.37 LRK55_RS02125 glutamate-5-semialdehyde dehydrogenase low > 63
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS05885 LysR substrate-binding domain-containing protein 0.38 ABZR86_RS08680 glutamate-5-semialdehyde dehydrogenase 0.91 61
Lysobacter sp. OAE881 0.34 ABIE51_RS15850 LysR family transcriptional regulator 0.38 ABIE51_RS13365 glutamate-5-semialdehyde dehydrogenase 0.90 52
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1249.1 Transcriptional regulator 0.39 Xcc-8004.2327.1 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.74 13
Mucilaginibacter yixingensis YX-36 DSM 26809 0.16 ABZR88_RS05415 LysR substrate-binding domain-containing protein 0.36 ABZR88_RS22165 glutamate-5-semialdehyde dehydrogenase low > 71

Not shown: 0 genomes with orthologs for HER17_RS10870 only; 41 genomes with orthologs for HER17_RS04705 only