Conservation of cofitness between HER17_RS21560 and HER17_RS03095 in Pectobacterium carotovorum WPP14

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS21560 response regulator 1.0 HER17_RS03095 acetolactate synthase 3 large subunit 0.57 16
Dickeya dianthicola 67-19 0.82 HGI48_RS21345 response regulator 0.91 HGI48_RS18040 acetolactate synthase 3 large subunit low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS22325 response regulator 0.91 DZA65_RS19185 acetolactate synthase 3 large subunit low > 75
Pantoea sp. MT58 0.79 IAI47_00340 response regulator 0.85 IAI47_15990 acetolactate synthase 3 large subunit low > 76
Rahnella sp. WP5 0.76 EX31_RS03275 response regulator 0.87 EX31_RS03665 acetolactate synthase 3 large subunit low > 89
Enterobacter asburiae PDN3 0.74 EX28DRAFT_3057 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.84 EX28DRAFT_3673 acetolactate synthase, large subunit (EC 2.2.1.6) low > 76
Serratia liquefaciens MT49 0.74 IAI46_21235 response regulator 0.87 IAI46_03375 acetolactate synthase 3 large subunit low > 86
Klebsiella michiganensis M5al 0.72 BWI76_RS24335 two-component system response regulator QseB 0.84 BWI76_RS04695 acetolactate synthase 3 large subunit low > 92
Enterobacter sp. TBS_079 0.72 MPMX20_03863 Transcriptional regulatory protein QseB 0.83 MPMX20_00771 Acetolactate synthase isozyme 3 large subunit low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF3138 Two-component system response regulator QseB 0.80 GFF161 Acetolactate synthase large subunit (EC 2.2.1.6) low > 78
Escherichia coli ECRC98 0.71 JDDGAC_22515 Transcriptional regulatory protein QseB 0.85 JDDGAC_14295 ilvI acetolactate synthase 3 large subunit low > 86
Escherichia coli ECRC101 0.71 MCAODC_09395 Transcriptional regulatory protein QseB 0.85 MCAODC_01215 ilvI acetolactate synthase 3 large subunit low > 87
Escherichia coli ECOR27 0.71 NOLOHH_10660 Transcriptional regulatory protein QseB 0.85 NOLOHH_03045 ilvI acetolactate synthase 3 large subunit low > 75
Escherichia coli ECRC99 0.71 KEDOAH_09265 Transcriptional regulatory protein QseB 0.85 KEDOAH_17455 ilvI acetolactate synthase 3 large subunit
Escherichia coli ECRC62 0.71 BNILDI_00855 Transcriptional regulatory protein QseB 0.86 BNILDI_08565 ilvI acetolactate synthase 3 large subunit low > 75
Escherichia coli ECRC102 0.71 NIAGMN_16645 Transcriptional regulatory protein QseB 0.85 NIAGMN_08550 ilvI acetolactate synthase 3 large subunit
Escherichia coli ECRC100 0.71 OKFHMN_18880 Transcriptional regulatory protein QseB 0.85 OKFHMN_10700 ilvI acetolactate synthase 3 large subunit low > 80
Escherichia coli BW25113 0.71 b3025 qseB DNA-binding response regulator in two-component regulatory system with QseC (NCBI) 0.85 b0077 ilvI acetolactate synthase III large subunit (NCBI) low > 76
Escherichia coli ECOR38 0.70 HEPCGN_17740 Quorum sensing DNA-binding response regulator in two-component regulatory system with QseC 0.85 HEPCGN_08680 ilvI acetolactate synthase 3 large subunit low > 87
Escherichia coli BL21 0.70 ECD_02897 quorum sensing DNA-binding response regulator in two-component regulatory system with QseC 0.86 ECD_00079 acetolactate synthase 3 large subunit low > 61
Escherichia fergusonii Becca 0.70 EFB2_00788 Transcriptional regulatory protein QseB 0.85 EFB2_03969 Acetolactate synthase isozyme 3 large subunit low > 86
Escherichia coli Nissle 1917 0.70 ECOLIN_RS17425 quorum sensing response regulator transcription factor QseB 0.85 ECOLIN_RS00415 acetolactate synthase 3 large subunit low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_00677 Transcriptional regulatory protein QseB 0.85 OHPLBJKB_03581 Acetolactate synthase isozyme 3 large subunit low > 73
Paraburkholderia graminis OAS925 0.55 ABIE53_003418 two-component system response regulator QseB 0.56 ABIE53_001574 acetolactate synthase-1/2/3 large subunit
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS16220 transcriptional regulator 0.57 BPHYT_RS06545 acetolactate synthase
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_04180 two component transcriptional regulator, winged helix family 0.57 H281DRAFT_04551 acetolactate synthase, large subunit
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS02475 response regulator 0.56 QEN71_RS24225 acetolactate synthase 3 catalytic subunit low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF700 Two-component system response regulator QseB 0.59 GFF4276 Acetolactate synthase large subunit (EC 2.2.1.6)
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS21985 transcriptional regulator 0.57 HSERO_RS08650 acetolactate synthase low > 78
Pseudomonas sp. S08-1 0.51 OH686_04665 Two-component system response regulator QseB 0.67 OH686_08130 acetolactate synthase, large subunit, biosynthetic type low > 80
Variovorax sp. SCN45 0.51 GFF1175 Two-component system response regulator QseB 0.57 GFF1158 Acetolactate synthase large subunit (EC 2.2.1.6)
Variovorax sp. OAS795 0.50 ABID97_RS14955 response regulator 0.57 ABID97_RS14885 acetolactate synthase 3 catalytic subunit
Pseudomonas sp. RS175 0.50 PFR28_02328 Transcriptional regulatory protein QseB 0.67 PFR28_03699 Acetolactate synthase isozyme 3 large subunit low > 88
Dechlorosoma suillum PS 0.50 Dsui_3448 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 0.57 Dsui_3529 acetolactate synthase, large subunit, biosynthetic type
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS37390 XRE family transcriptional regulator 0.59 RR42_RS05435 acetolactate synthase 3 catalytic subunit
Pseudomonas simiae WCS417 0.50 PS417_13595 XRE family transcriptional regulator 0.66 PS417_23810 acetolactate synthase 3 catalytic subunit low > 88
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_3169 Two-component system response regulator QseB 0.66 PfGW456L13_1538 Acetolactate synthase large subunit (EC 2.2.1.6) low > 87
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS15245 response regulator 0.66 PFLU_RS25650 acetolactate synthase 3 large subunit
Pseudomonas fluorescens SBW25 0.49 PFLU_RS15245 response regulator 0.66 PFLU_RS25650 acetolactate synthase 3 large subunit
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_23845 XRE family transcriptional regulator 0.66 AO356_16170 acetolactate synthase 3 catalytic subunit low > 104
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_4454 Two-component system response regulator QseB 0.66 Pf1N1B4_2878 Acetolactate synthase large subunit (EC 2.2.1.6)
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_1539 Two-component system response regulator QseB 0.67 Pf6N2E2_5175 Acetolactate synthase large subunit (EC 2.2.1.6) low > 103
Acidovorax sp. GW101-3H11 0.49 Ac3H11_3946 Two-component system response regulator QseB 0.57 Ac3H11_525 Acetolactate synthase large subunit (EC 2.2.1.6) low > 79
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS22890 response regulator transcription factor 0.59 ABZR87_RS14955 acetolactate synthase 3 catalytic subunit low > 80
Pseudomonas putida KT2440 0.48 PP_2713 DNA-binding response regulator 0.68 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase low > 96
Pseudomonas stutzeri RCH2 0.48 Psest_3476 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.68 Psest_1036 acetolactate synthase, large subunit, biosynthetic type
Ralstonia solanacearum GMI1000 0.48 RS_RS24590 DNA-binding response regulator 0.58 RS_RS10420 acetolactate synthase 3 large subunit
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_19370 transcriptional regulator 0.66 AO353_14495 acetolactate synthase 3 catalytic subunit low > 101
Ralstonia solanacearum PSI07 0.47 RPSI07_RS07290 DNA-binding response regulator 0.59 RPSI07_RS14255 acetolactate synthase, large subunit, biosynthetic type
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS16415 DNA-binding response regulator 0.58 RALBFv3_RS03050 acetolactate synthase 3 large subunit
Ralstonia solanacearum UW163 0.46 UW163_RS17155 DNA-binding response regulator 0.58 UW163_RS10675 acetolactate synthase 3 large subunit
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_3511 Response regulator receiver:Transcriptional regulatory protein, C-terminal 0.67 Psyr_0846 acetolactate synthase, large subunit 0.42 14
Acinetobacter radioresistens SK82 0.44 MPMX26_03174 Transcriptional regulatory protein QseB 0.65 MPMX26_00472 Acetolactate synthase isozyme 3 large subunit low > 36
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_3511 Response regulator receiver:Transcriptional regulatory protein, C-terminal 0.67 Psyr_0846 acetolactate synthase, large subunit low > 86
Shewanella oneidensis MR-1 0.42 SO2104 DNA-binding response regulator YgiX, putative (NCBI ptt file) 0.78 SO2279 ilvI acetolactate synthase III, large subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.41 Shewana3_1885 two component transcriptional regulator (RefSeq) 0.78 Shewana3_2269 acetolactate synthase 3 catalytic subunit (RefSeq) low > 73
Marinobacter adhaerens HP15 0.41 HP15_3968 two component transcriptional regulator, winged helix family 0.66 HP15_531 acetolactate synthase, large subunit, biosynthetic type low > 73
Synechococcus elongatus PCC 7942 0.34 Synpcc7942_B2647 response regulator receiver domain protein (CheY-like) 0.46 Synpcc7942_0139 ilvB acetolactate synthase 3 catalytic subunit

Not shown: 6 genomes with orthologs for HER17_RS21560 only; 28 genomes with orthologs for HER17_RS03095 only