Conservation of cofitness between HER17_RS10870 and HER17_RS03075 in Pectobacterium carotovorum WPP14

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10870 HTH-type transcriptional regulator CysB 1.0 HER17_RS03075 3-isopropylmalate dehydratase large subunit 0.96 3
Dickeya dadantii 3937 0.95 DDA3937_RS10540 HTH-type transcriptional regulator CysB 0.89 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit low > 74
Dickeya dianthicola 67-19 0.95 HGI48_RS10540 HTH-type transcriptional regulator CysB 0.89 HGI48_RS18065 3-isopropylmalate dehydratase large subunit low > 71
Dickeya dianthicola ME23 0.95 DZA65_RS11020 HTH-type transcriptional regulator CysB 0.89 DZA65_RS19210 3-isopropylmalate dehydratase large subunit 0.62 43
Serratia liquefaciens MT49 0.93 IAI46_13965 HTH-type transcriptional regulator CysB 0.89 IAI46_03345 3-isopropylmalate dehydratase large subunit
Rahnella sp. WP5 0.93 EX31_RS09890 HTH-type transcriptional regulator CysB 0.91 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.96 12
Klebsiella michiganensis M5al 0.92 BWI76_RS11930 LysR family transcriptional regulator CysB 0.84 BWI76_RS04670 3-isopropylmalate dehydratase large subunit
Erwinia tracheiphila SCR3 0.92 LU632_RS12550 cysB HTH-type transcriptional regulator CysB 0.78 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit
Escherichia coli ECOR38 0.91 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB 0.85 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 0.81 21
Enterobacter sp. TBS_079 0.91 MPMX20_02501 HTH-type transcriptional regulator CysB 0.86 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC100 0.91 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB 0.85 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli Nissle 1917 0.91 ECOLIN_RS07680 HTH-type transcriptional regulator CysB 0.85 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit 0.56 5
Escherichia coli ECRC99 0.91 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB 0.85 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0946 Transcriptional regulator 0.87 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit
Escherichia coli BL21 0.91 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor 0.85 ECD_00074 3-isopropylmalate dehydratase large subunit
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_02409 HTH-type transcriptional regulator CysB 0.85 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit low > 73
Escherichia coli ECRC98 0.91 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB 0.85 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC62 0.91 BNILDI_18415 cysB HTH-type transcriptional regulator CysB 0.85 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECOR27 0.91 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB 0.85 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC101 0.91 MCAODC_15665 cysB HTH-type transcriptional regulator CysB 0.85 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli BW25113 0.91 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) 0.85 b0072 leuC isopropylmalate isomerase large subunit (NCBI)
Escherichia coli ECRC102 0.91 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB 0.85 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia fergusonii Becca 0.91 EFB2_02652 HTH-type transcriptional regulator CysB 0.85 EFB2_03973 3-isopropylmalate dehydratase large subunit
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2712 Cys regulon transcriptional activator CysB 0.86 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Pantoea sp. MT58 0.90 IAI47_09240 HTH-type transcriptional regulator CysB 0.87 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.69 32
Vibrio cholerae E7946 ATCC 55056 0.80 CSW01_09545 HTH-type transcriptional regulator CysB 0.78 CSW01_12605 3-isopropylmalate dehydratase large subunit
Alteromonas macleodii MIT1002 0.78 MIT1002_02005 Cys regulon transcriptional activator 0.68 MIT1002_00947 3-isopropylmalate dehydratase large subunit
Shewanella amazonensis SB2B 0.75 Sama_1324 cysB transcriptional regulator CysB (RefSeq) 0.69 Sama_0337 isopropylmalate isomerase large subunit (RefSeq)
Shewanella oneidensis MR-1 0.75 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) 0.70 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) 0.84 21
Shewanella sp. ANA-3 0.75 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) 0.70 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq)
Shewanella loihica PV-4 0.75 Shew_1624 cysB transcriptional regulator CysB (RefSeq) 0.70 Shew_3470 isopropylmalate isomerase large subunit (RefSeq)
Pseudomonas putida KT2440 0.68 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 0.62 PP_1985 3-isopropylmalate dehydratase large subunit 0.81 18
Marinobacter adhaerens HP15 0.68 HP15_1854 transcriptional regulator, LysR family 0.61 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain
Pseudomonas simiae WCS417 0.68 PS417_08460 CysB family transcriptional regulator 0.62 PS417_18600 isopropylmalate isomerase
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_2230 Cys regulon transcriptional activator CysB 0.62 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.90 8
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_283 Cys regulon transcriptional activator CysB 0.62 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Pseudomonas sp. S08-1 0.67 OH686_01730 Cys regulon transcriptional activator CysB 0.62 OH686_04480 3-isopropylmalate dehydratase large subunit low > 80
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.62 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.41 23
Pseudomonas fluorescens SBW25 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.62 PFLU_RS20580 3-isopropylmalate dehydratase large subunit low > 109
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_19060 CysB family transcriptional regulator 0.63 AO353_20620 isopropylmalate isomerase 0.63 22
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_2465 Cys regulon transcriptional activator CysB 0.62 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.73 15
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_03180 CysB family transcriptional regulator 0.62 AO356_21400 isopropylmalate isomerase 0.48 38
Pseudomonas sp. RS175 0.67 PFR28_00966 HTH-type transcriptional regulator CysB 0.62 PFR28_02824 3-isopropylmalate dehydratase large subunit low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.62 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.71 22
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.62 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.81 15
Pseudomonas stutzeri RCH2 0.66 Psest_2329 Transcriptional regulator 0.62 Psest_2591 3-isopropylmalate dehydratase, large subunit 0.70 22
Dechlorosoma suillum PS 0.52 Dsui_1988 transcriptional regulator 0.58 Dsui_3201 3-isopropylmalate dehydratase, large subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI 0.60 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 90
Variovorax sp. SCN45 0.43 GFF244 Cys regulon transcriptional activator CysB 0.59 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 127
Variovorax sp. OAS795 0.43 ABID97_RS16600 CysB family HTH-type transcriptional regulator 0.59 ABID97_RS08465 3-isopropylmalate dehydratase large subunit
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_2455 Transcriptional regulator 0.62 B158DRAFT_1319 3-isopropylmalate dehydratase, large subunit low > 40
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI 0.60 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.67 24
Castellaniella sp019104865 MT123 0.40 ABCV34_RS08230 CysB family HTH-type transcriptional regulator 0.62 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit 0.55 20
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_05975 lysR CysB family transcriptional regulator 0.50 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit low > 52
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS00915 LysR substrate-binding domain-containing protein 0.54 LRK54_RS07375 3-isopropylmalate dehydratase large subunit low > 59
Rhodanobacter denitrificans MT42 0.36 LRK55_RS00690 LysR substrate-binding domain-containing protein 0.54 LRK55_RS07105 3-isopropylmalate dehydratase large subunit low > 63
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS05885 LysR substrate-binding domain-containing protein 0.51 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit 0.97 5
Lysobacter sp. OAE881 0.34 ABIE51_RS15850 LysR family transcriptional regulator 0.49 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit 0.94 41
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1249.1 Transcriptional regulator 0.62 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.16 ABZR88_RS05415 LysR substrate-binding domain-containing protein 0.57 ABZR88_RS11595 3-isopropylmalate dehydratase large subunit

Not shown: 0 genomes with orthologs for HER17_RS10870 only; 43 genomes with orthologs for HER17_RS03075 only