Conservation of cofitness between HER17_RS10870 and HER17_RS03070 in Pectobacterium carotovorum WPP14

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10870 HTH-type transcriptional regulator CysB 1.0 HER17_RS03070 3-isopropylmalate dehydratase small subunit 0.95 11
Dickeya dadantii 3937 0.95 DDA3937_RS10540 HTH-type transcriptional regulator CysB 0.89 DDA3937_RS18130 3-isopropylmalate dehydratase small subunit low > 74
Dickeya dianthicola 67-19 0.95 HGI48_RS10540 HTH-type transcriptional regulator CysB 0.87 HGI48_RS18070 3-isopropylmalate dehydratase small subunit low > 71
Dickeya dianthicola ME23 0.95 DZA65_RS11020 HTH-type transcriptional regulator CysB 0.88 DZA65_RS19215 3-isopropylmalate dehydratase small subunit 0.62 41
Serratia liquefaciens MT49 0.93 IAI46_13965 HTH-type transcriptional regulator CysB 0.89 IAI46_03340 3-isopropylmalate dehydratase small subunit
Rahnella sp. WP5 0.93 EX31_RS09890 HTH-type transcriptional regulator CysB 0.87 EX31_RS03695 3-isopropylmalate dehydratase small subunit 0.94 39
Erwinia tracheiphila SCR3 0.92 LU632_RS12550 cysB HTH-type transcriptional regulator CysB 0.73 LU632_RS02865 leuD 3-isopropylmalate dehydratase small subunit
Klebsiella michiganensis M5al 0.92 BWI76_RS11930 LysR family transcriptional regulator CysB 0.84 BWI76_RS04665 3-isopropylmalate dehydratase small subunit
Enterobacter sp. TBS_079 0.91 MPMX20_02501 HTH-type transcriptional regulator CysB 0.82 MPMX20_00766 3-isopropylmalate dehydratase small subunit 1
Escherichia coli ECOR38 0.91 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB 0.82 HEPCGN_08710 leuD 3-isopropylmalate dehydratase small subunit 0.74 76
Escherichia coli BL21 0.91 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor 0.82 ECD_00073 3-isopropylmalate dehydratase small subunit
Escherichia coli ECRC99 0.91 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB 0.81 KEDOAH_17425 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli Nissle 1917 0.91 ECOLIN_RS07680 HTH-type transcriptional regulator CysB 0.82 ECOLIN_RS00385 3-isopropylmalate dehydratase small subunit 0.51 21
Escherichia coli ECRC102 0.91 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB 0.81 NIAGMN_08580 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli ECRC98 0.91 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB 0.81 JDDGAC_14325 leuD 3-isopropylmalate dehydratase small subunit
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0946 Transcriptional regulator 0.83 EX28DRAFT_3667 3-isopropylmalate dehydratase, small subunit
Escherichia coli BW25113 0.91 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) 0.82 b0071 leuD isopropylmalate isomerase small subunit (NCBI)
Escherichia coli ECRC100 0.91 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB 0.81 OKFHMN_10730 leuD 3-isopropylmalate dehydratase small subunit
Escherichia fergusonii Becca 0.91 EFB2_02652 HTH-type transcriptional regulator CysB 0.82 EFB2_03974 3-isopropylmalate dehydratase small subunit
Escherichia coli ECRC101 0.91 MCAODC_15665 cysB HTH-type transcriptional regulator CysB 0.81 MCAODC_01245 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_02409 HTH-type transcriptional regulator CysB 0.82 OHPLBJKB_03586 3-isopropylmalate dehydratase small subunit low > 73
Escherichia coli ECOR27 0.91 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB 0.82 NOLOHH_03075 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli ECRC62 0.91 BNILDI_18415 cysB HTH-type transcriptional regulator CysB 0.82 BNILDI_08535 leuD 3-isopropylmalate dehydratase small subunit
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2712 Cys regulon transcriptional activator CysB 0.83 GFF167 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Pantoea sp. MT58 0.90 IAI47_09240 HTH-type transcriptional regulator CysB 0.85 IAI47_16015 3-isopropylmalate dehydratase small subunit 0.71 9
Vibrio cholerae E7946 ATCC 55056 0.80 CSW01_09545 HTH-type transcriptional regulator CysB 0.78 CSW01_12610 3-isopropylmalate dehydratase small subunit
Alteromonas macleodii MIT1002 0.78 MIT1002_02005 Cys regulon transcriptional activator 0.60 MIT1002_00946 3-isopropylmalate dehydratase small subunit 1
Shewanella amazonensis SB2B 0.75 Sama_1324 cysB transcriptional regulator CysB (RefSeq) 0.64 Sama_0338 leuD isopropylmalate isomerase small subunit (RefSeq)
Shewanella oneidensis MR-1 0.75 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) 0.64 SO4233 leuD 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) 0.83 34
Shewanella loihica PV-4 0.75 Shew_1624 cysB transcriptional regulator CysB (RefSeq) 0.64 Shew_3469 isopropylmalate isomerase small subunit (RefSeq)
Shewanella sp. ANA-3 0.75 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) 0.62 Shewana3_3758 leuD isopropylmalate isomerase small subunit (RefSeq)
Pseudomonas putida KT2440 0.68 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 0.61 PP_1986 3-isopropylmalate dehydratase small subunit 0.74 30
Marinobacter adhaerens HP15 0.68 HP15_1854 transcriptional regulator, LysR family 0.57 HP15_1833 isopropylmalate isomerase small subunit
Pseudomonas simiae WCS417 0.68 PS417_08460 CysB family transcriptional regulator 0.62 PS417_18595 3-isopropylmalate dehydratase
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_2230 Cys regulon transcriptional activator CysB 0.59 PfGW456L13_3947 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.89 13
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_283 Cys regulon transcriptional activator CysB 0.59 Pf1N1B4_14 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Pseudomonas sp. S08-1 0.67 OH686_01730 Cys regulon transcriptional activator CysB 0.61 OH686_04475 3-isopropylmalate dehydratase small subunit low > 80
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.61 PFLU_RS20575 3-isopropylmalate dehydratase small subunit 0.38 30
Pseudomonas fluorescens SBW25 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.61 PFLU_RS20575 3-isopropylmalate dehydratase small subunit low > 109
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_2465 Cys regulon transcriptional activator CysB 0.59 Pf6N2E2_64 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.76 9
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_03180 CysB family transcriptional regulator 0.59 AO356_21405 3-isopropylmalate dehydratase 0.50 15
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_19060 CysB family transcriptional regulator 0.59 AO353_20625 3-isopropylmalate dehydratase 0.63 23
Pseudomonas sp. RS175 0.67 PFR28_00966 HTH-type transcriptional regulator CysB 0.59 PFR28_02823 3-isopropylmalate dehydratase small subunit 1 low > 88
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.59 Psyr_1984 3-isopropylmalate dehydratase, small subunit 0.82 12
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.59 Psyr_1984 3-isopropylmalate dehydratase, small subunit 0.74 13
Pseudomonas stutzeri RCH2 0.66 Psest_2329 Transcriptional regulator 0.63 Psest_2590 3-isopropylmalate dehydratase, small subunit 0.67 29
Dechlorosoma suillum PS 0.52 Dsui_1988 transcriptional regulator 0.55 Dsui_3199 3-isopropylmalate dehydratase, small subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI 0.59 GFF3361 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 90
Variovorax sp. SCN45 0.43 GFF244 Cys regulon transcriptional activator CysB 0.58 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 127
Variovorax sp. OAS795 0.43 ABID97_RS16600 CysB family HTH-type transcriptional regulator 0.59 ABID97_RS08460 3-isopropylmalate dehydratase small subunit
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_2455 Transcriptional regulator 0.58 B158DRAFT_1320 3-isopropylmalate dehydratase, small subunit low > 40
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI 0.56 Ac3H11_1527 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.61 46
Castellaniella sp019104865 MT123 0.40 ABCV34_RS08230 CysB family HTH-type transcriptional regulator 0.55 ABCV34_RS04285 3-isopropylmalate dehydratase small subunit low > 48
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_05975 lysR CysB family transcriptional regulator 0.40 OKGIIK_13590 leuD 3-isopropylmalate dehydratase small subunit low > 52
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS00915 LysR substrate-binding domain-containing protein 0.42 LRK54_RS07370 3-isopropylmalate dehydratase small subunit low > 59
Rhodanobacter denitrificans MT42 0.36 LRK55_RS00690 LysR substrate-binding domain-containing protein 0.42 LRK55_RS07100 3-isopropylmalate dehydratase small subunit low > 63
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS05885 LysR substrate-binding domain-containing protein 0.40 ABZR86_RS15955 3-isopropylmalate dehydratase small subunit 0.96 20
Lysobacter sp. OAE881 0.34 ABIE51_RS15850 LysR family transcriptional regulator 0.39 ABIE51_RS17580 3-isopropylmalate dehydratase small subunit 0.89 55
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1249.1 Transcriptional regulator 0.60 Xcc-8004.1050.1 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.16 ABZR88_RS05415 LysR substrate-binding domain-containing protein 0.46 ABZR88_RS11600 3-isopropylmalate dehydratase small subunit

Not shown: 0 genomes with orthologs for HER17_RS10870 only; 39 genomes with orthologs for HER17_RS03070 only