Conservation of cofitness between HER17_RS10870 and HER17_RS02900 in Pectobacterium carotovorum WPP14

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10870 HTH-type transcriptional regulator CysB 1.0 HER17_RS02900 carbamoyl-phosphate synthase large subunit 0.97 1
Dickeya dadantii 3937 0.95 DDA3937_RS10540 HTH-type transcriptional regulator CysB 0.96 DDA3937_RS18305 carbamoyl-phosphate synthase large subunit low > 74
Dickeya dianthicola 67-19 0.95 HGI48_RS10540 HTH-type transcriptional regulator CysB 0.96 HGI48_RS18240 carbamoyl-phosphate synthase large subunit 0.76 23
Dickeya dianthicola ME23 0.95 DZA65_RS11020 HTH-type transcriptional regulator CysB 0.96 DZA65_RS19380 carbamoyl-phosphate synthase large subunit low > 75
Serratia liquefaciens MT49 0.93 IAI46_13965 HTH-type transcriptional regulator CysB 0.96 IAI46_03195 carbamoyl-phosphate synthase large subunit
Rahnella sp. WP5 0.93 EX31_RS09890 HTH-type transcriptional regulator CysB 0.95 EX31_RS03830 carbamoyl-phosphate synthase large subunit 0.95 27
Klebsiella michiganensis M5al 0.92 BWI76_RS11930 LysR family transcriptional regulator CysB 0.95 BWI76_RS04470 carbamoyl phosphate synthase large subunit
Erwinia tracheiphila SCR3 0.92 LU632_RS12550 cysB HTH-type transcriptional regulator CysB 0.92 LU632_RS02750 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECOR38 0.91 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB 0.95 HEPCGN_08925 carB carbamoyl-phosphate synthase large subunit 0.77 54
Enterobacter sp. TBS_079 0.91 MPMX20_02501 HTH-type transcriptional regulator CysB 0.95 MPMX20_00740 Carbamoyl-phosphate synthase large chain
Escherichia coli ECRC100 0.91 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB 0.95 OKFHMN_10940 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC98 0.91 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB 0.95 JDDGAC_14535 carB carbamoyl-phosphate synthase large subunit
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0946 Transcriptional regulator 0.96 EX28DRAFT_3638 carbamoyl-phosphate synthase, large subunit
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_02409 HTH-type transcriptional regulator CysB 0.95 OHPLBJKB_03624 Carbamoyl-phosphate synthase large chain 0.30 39
Escherichia coli BL21 0.91 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor 0.95 ECD_00037 carbamoyl-phosphate synthase large subunit
Escherichia coli ECOR27 0.91 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB 0.95 NOLOHH_03270 carB carbamoyl-phosphate synthase large subunit
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2712 Cys regulon transcriptional activator CysB 0.95 GFF213 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Escherichia coli BW25113 0.91 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) 0.95 b0033 carB carbamoyl-phosphate synthase large subunit (NCBI)
Escherichia coli Nissle 1917 0.91 ECOLIN_RS07680 HTH-type transcriptional regulator CysB 0.95 ECOLIN_RS00180 carbamoyl-phosphate synthase large subunit low > 55
Escherichia coli ECRC102 0.91 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB 0.95 NIAGMN_08790 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC62 0.91 BNILDI_18415 cysB HTH-type transcriptional regulator CysB 0.95 BNILDI_08330 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC101 0.91 MCAODC_15665 cysB HTH-type transcriptional regulator CysB 0.95 MCAODC_01455 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC99 0.91 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB 0.95 KEDOAH_17215 carB carbamoyl-phosphate synthase large subunit
Escherichia fergusonii Becca 0.91 EFB2_02652 HTH-type transcriptional regulator CysB 0.95 EFB2_04012 Carbamoyl-phosphate synthase large chain
Pantoea sp. MT58 0.90 IAI47_09240 HTH-type transcriptional regulator CysB 0.94 IAI47_16115 carbamoyl-phosphate synthase large subunit 0.67 42
Vibrio cholerae E7946 ATCC 55056 0.80 CSW01_09545 HTH-type transcriptional regulator CysB 0.87 CSW01_12100 carbamoyl-phosphate synthase large chain
Alteromonas macleodii MIT1002 0.78 MIT1002_02005 Cys regulon transcriptional activator 0.80 MIT1002_01467 Carbamoyl-phosphate synthase large chain
Shewanella amazonensis SB2B 0.75 Sama_1324 cysB transcriptional regulator CysB (RefSeq) 0.85 Sama_2503 carB carbamoyl phosphate synthase large subunit (RefSeq)
Shewanella oneidensis MR-1 0.75 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) 0.84 SO1142 carB carbamoyl-phosphate synthase, large subunit (NCBI ptt file) 0.87 2
Shewanella loihica PV-4 0.75 Shew_1624 cysB transcriptional regulator CysB (RefSeq) 0.84 Shew_2838 carB carbamoyl phosphate synthase large subunit (RefSeq)
Shewanella sp. ANA-3 0.75 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) 0.84 Shewana3_0968 carB carbamoyl phosphate synthase large subunit (RefSeq)
Pseudomonas putida KT2440 0.68 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 0.75 PP_4723 Carbamoyl-phosphate synthase large chain 0.45 76
Marinobacter adhaerens HP15 0.68 HP15_1854 transcriptional regulator, LysR family 0.74 HP15_3077 carbamoyl-phosphate synthase, large subunit
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_2230 Cys regulon transcriptional activator CysB 0.75 PfGW456L13_5099 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas simiae WCS417 0.68 PS417_08460 CysB family transcriptional regulator 0.75 PS417_24040 carbamoyl phosphate synthase large subunit
Pseudomonas sp. S08-1 0.67 OH686_01730 Cys regulon transcriptional activator CysB 0.75 OH686_17080 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_283 Cys regulon transcriptional activator CysB 0.75 Pf1N1B4_1172 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas fluorescens SBW25 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.75 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_19060 CysB family transcriptional regulator 0.75 AO353_05630 carbamoyl phosphate synthase large subunit
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_03180 CysB family transcriptional regulator 0.75 AO356_07480 carbamoyl phosphate synthase large subunit 0.38 84
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.75 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_2465 Cys regulon transcriptional activator CysB 0.75 Pf6N2E2_3364 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas sp. RS175 0.67 PFR28_00966 HTH-type transcriptional regulator CysB 0.76 PFR28_00077 Carbamoyl-phosphate synthase large chain
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.75 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.75 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas stutzeri RCH2 0.66 Psest_2329 Transcriptional regulator 0.75 Psest_0968 carbamoyl-phosphate synthase, large subunit
Dechlorosoma suillum PS 0.52 Dsui_1988 transcriptional regulator 0.68 Dsui_3064 carbamoyl-phosphate synthase, large subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI 0.66 GFF4898 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Variovorax sp. SCN45 0.43 GFF244 Cys regulon transcriptional activator CysB 0.67 GFF376 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Variovorax sp. OAS795 0.43 ABID97_RS16600 CysB family HTH-type transcriptional regulator 0.67 ABID97_RS17080 carbamoyl-phosphate synthase large subunit
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_2455 Transcriptional regulator 0.73 B158DRAFT_0616 carbamoyl-phosphate synthase, large subunit
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI 0.68 Ac3H11_436 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Castellaniella sp019104865 MT123 0.40 ABCV34_RS08230 CysB family HTH-type transcriptional regulator 0.66 ABCV34_RS15510 carbamoyl-phosphate synthase large subunit
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_05975 lysR CysB family transcriptional regulator 0.70 OKGIIK_07295 carB carbamoyl-phosphate synthase large subunit low > 52
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS00915 LysR substrate-binding domain-containing protein 0.70 LRK54_RS18000 carbamoyl-phosphate synthase large subunit
Rhodanobacter denitrificans MT42 0.36 LRK55_RS00690 LysR substrate-binding domain-containing protein 0.70 LRK55_RS17855 carbamoyl-phosphate synthase large subunit
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS05885 LysR substrate-binding domain-containing protein 0.69 ABZR86_RS05600 carbamoyl-phosphate synthase large subunit
Lysobacter sp. OAE881 0.34 ABIE51_RS15850 LysR family transcriptional regulator 0.69 ABIE51_RS11615 carbamoyl-phosphate synthase large subunit low > 62
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1249.1 Transcriptional regulator 0.70 Xcc-8004.2912.1 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.16 ABZR88_RS05415 LysR substrate-binding domain-containing protein 0.44 ABZR88_RS20475 carbamoyl-phosphate synthase large subunit

Not shown: 0 genomes with orthologs for HER17_RS10870 only; 44 genomes with orthologs for HER17_RS02900 only