Conservation of cofitness between HER17_RS10965 and HER17_RS02810 in Pectobacterium carotovorum WPP14

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10965 acyl-CoA thioester hydrolase YciA 1.0 HER17_RS02810 peroxide stress protein YaaA 0.69 15
Dickeya dadantii 3937 0.89 DDA3937_RS10430 acyl-CoA thioester hydrolase YciA 0.84 DDA3937_RS18400 peroxide stress protein YaaA low > 74
Dickeya dianthicola ME23 0.89 DZA65_RS10910 acyl-CoA thioester hydrolase YciA 0.82 DZA65_RS19470 peroxide stress protein YaaA low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS10435 acyl-CoA thioester hydrolase YciA 0.82 HGI48_RS18330 peroxide stress protein YaaA low > 71
Rahnella sp. WP5 0.85 EX31_RS10010 acyl-CoA thioester hydrolase YciA 0.76 EX31_RS03930 peroxide stress protein YaaA low > 89
Serratia liquefaciens MT49 0.84 IAI46_14085 acyl-CoA thioester hydrolase YciA 0.80 IAI46_03045 peroxide stress protein YaaA low > 86
Enterobacter asburiae PDN3 0.80 EX28DRAFT_0923 Acyl-CoA hydrolase 0.81 EX28DRAFT_3618 Uncharacterized protein conserved in bacteria low > 76
Pantoea sp. MT58 0.80 IAI47_09135 acyl-CoA thioester hydrolase YciA 0.79 IAI47_16200 peroxide stress protein YaaA low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_02575 putative acyl-CoA thioester hydrolase 0.82 MPMX20_00714 Peroxide stress resistance protein YaaA low > 85
Klebsiella michiganensis M5al 0.79 BWI76_RS11790 acyl-CoA thioesterase 0.80 BWI76_RS04260 peroxide stress protein YaaA low > 92
Escherichia fergusonii Becca 0.79 EFB2_02672 putative acyl-CoA thioester hydrolase 0.82 EFB2_04037 Peroxide stress resistance protein YaaA low > 86
Escherichia coli ECOR38 0.79 HEPCGN_25145 yciA acyl-CoA thioester hydrolase YciA 0.82 HEPCGN_09095 yaaA peroxide stress protein YaaA low > 87
Escherichia coli ECOR27 0.79 NOLOHH_20370 yciA acyl-CoA thioester hydrolase YciA 0.81 NOLOHH_03420 yaaA peroxide stress protein YaaA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_02430 putative acyl-CoA thioester hydrolase 0.82 OHPLBJKB_03654 hypothetical protein low > 73
Escherichia coli BW25113 0.79 b1253 yciA predicted hydrolase (NCBI) 0.81 b0006 yaaA hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.79 ECOLIN_RS07565 acyl-CoA thioester hydrolase YciA 0.82 ECOLIN_RS00035 peroxide stress protein YaaA low > 55
Escherichia coli ECRC62 0.79 BNILDI_18515 yciA acyl-CoA thioester hydrolase YciA 0.81 BNILDI_08185 yaaA peroxide stress protein YaaA low > 75
Escherichia coli BL21 0.79 ECD_01227 acyl-CoA esterase 0.82 ECD_00006 peroxide resistance protein, lowers intracellular iron low > 61
Escherichia coli ECRC101 0.79 MCAODC_21580 yciA acyl-CoA thioester hydrolase YciA 0.82 MCAODC_01605 yaaA peroxide stress protein YaaA low > 87
Escherichia coli ECRC100 0.79 OKFHMN_28680 yciA acyl-CoA thioester hydrolase YciA 0.82 OKFHMN_11090 yaaA peroxide stress protein YaaA low > 80
Escherichia coli ECRC99 0.79 KEDOAH_25675 yciA acyl-CoA thioester hydrolase YciA 0.82 KEDOAH_17065 yaaA peroxide stress protein YaaA — —
Escherichia coli ECRC102 0.79 NIAGMN_27555 yciA acyl-CoA thioester hydrolase YciA 0.82 NIAGMN_08940 yaaA peroxide stress protein YaaA — —
Escherichia coli ECRC98 0.79 JDDGAC_05895 yciA acyl-CoA thioester hydrolase YciA 0.82 JDDGAC_14685 yaaA peroxide stress protein YaaA low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2735 Acyl-CoA thioesterase YciA, involved in membrane biogenesis 0.79 GFF1081 UPF0246 protein YaaA low > 78
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_08560 acyl-CoA thioester hydrolase YciA 0.69 CSW01_11930 peroxide stress protein YaaA low > 62
Dinoroseobacter shibae DFL-12 0.52 Dshi_2218 thioesterase superfamily protein (RefSeq) 0.43 Dshi_3333 protein of unknown function DUF328 (RefSeq) low > 64
Acinetobacter radioresistens SK82 0.48 MPMX26_02646 putative acyl-CoA thioester hydrolase 0.68 MPMX26_02017 Peroxide stress resistance protein YaaA low > 36
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS12320 acyl-CoA thioesterase 0.45 A4249_RS06085 peroxide stress protein YaaA low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF516 Acyl-CoA hydrolase (EC 3.1.2.20) 0.54 GFF720 UPF0246 protein YaaA low > 90
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_5043 Thioesterase superfamily 0.65 Psyr_1064 Protein of unknown function DUF328 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_5043 Thioesterase superfamily 0.65 Psyr_1064 Protein of unknown function DUF328 low > 86
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_00190 acyl-CoA hydrolase 0.48 CCNA_03496 hypothetical protein low > 67
Caulobacter crescentus NA1000 0.44 CCNA_00190 acyl-CoA hydrolase 0.48 CCNA_03496 hypothetical protein low > 66
Pseudomonas sp. RS175 0.44 PFR28_04491 putative acyl-CoA thioester hydrolase 0.67 PFR28_03554 Peroxide stress resistance protein YaaA low > 88
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_11055 long-chain acyl-CoA thioester hydrolase 0.67 AO356_17320 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_4077 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.66 Pf6N2E2_5389 UPF0246 protein YaaA low > 103
Pseudomonas fluorescens SBW25 0.43 PFLU_RS29780 acyl-CoA thioesterase 0.63 PFLU_RS04920 peroxide stress protein YaaA low > 109
Pseudomonas simiae WCS417 0.43 PS417_28095 long-chain acyl-CoA thioester hydrolase 0.65 PS417_04850 hypothetical protein — —
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS29780 acyl-CoA thioesterase 0.63 PFLU_RS04920 peroxide stress protein YaaA low > 109
Marinobacter adhaerens HP15 0.43 HP15_3390 thioesterase superfamily protein 0.69 HP15_1223 protein YaaA low > 73
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_09915 long-chain acyl-CoA thioester hydrolase 0.67 AO353_04675 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_2032 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.66 Pf1N1B4_981 UPF0246 protein YaaA — —
Pseudomonas putida KT2440 0.43 PP_5331 Long-chain acyl-CoA thioester hydrolase 0.67 PP_1289 conserved protein of unknown function, DUF328 family low > 96
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_751 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.66 PfGW456L13_1686 UPF0246 protein YaaA low > 87
Pseudomonas stutzeri RCH2 0.43 Psest_0218 Acyl-CoA hydrolase 0.64 Psest_3173 Uncharacterized protein conserved in bacteria low > 67
Pseudomonas sp. S08-1 0.43 OH686_13400 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.64 OH686_07085 UPF0246 protein YaaA low > 80
Acidovorax sp. GW101-3H11 0.43 Ac3H11_1945 Acyl-CoA hydrolase (EC 3.1.2.20) 0.53 Ac3H11_1593 UPF0246 protein YaaA low > 79
Dechlorosoma suillum PS 0.43 Dsui_0322 acyl-CoA hydrolase 0.58 Dsui_2322 hypothetical protein low > 51
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS11535 acyl-CoA thioesterase 0.59 RALBFv3_RS02720 peroxide stress protein YaaA low > 76
Variovorax sp. OAS795 0.42 ABID97_RS05905 acyl-CoA thioesterase 0.47 ABID97_RS07905 peroxide stress protein YaaA low > 91
Ralstonia solanacearum PSI07 0.42 RPSI07_RS21675 acyl-CoA thioesterase 0.59 RPSI07_RS14595 peroxide stress protein YaaA low > 81
Ralstonia solanacearum UW163 0.42 UW163_RS02050 acyl-CoA thioesterase 0.59 UW163_RS11005 peroxide stress protein YaaA — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS02530 acyl-CoA hydrolase 0.56 RR42_RS05780 hypothetical protein low > 128
Variovorax sp. SCN45 0.42 GFF4599 Acyl-CoA hydrolase (EC 3.1.2.20) 0.48 GFF6020 UPF0246 protein YaaA low > 127
Ralstonia solanacearum GMI1000 0.41 RS_RS02365 acyl-CoA thioesterase 0.59 RS_RS10095 peroxide stress protein YaaA low > 80
Castellaniella sp019104865 MT123 0.41 ABCV34_RS09595 acyl-CoA thioesterase 0.47 ABCV34_RS01170 peroxide stress protein YaaA low > 48
Paraburkholderia graminis OAS925 0.41 ABIE53_000793 acyl-CoA thioesterase YciA 0.58 ABIE53_001622 cytoplasmic iron level regulating protein YaaA (DUF328/UPF0246 family) low > 113
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS07500 acyl-CoA thioesterase 0.61 ABZR87_RS14635 peroxide stress protein YaaA low > 80
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_04633 (3S)-malyl-CoA thioesterase 0.57 H281DRAFT_04599 hypothetical protein low > 103
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS02095 acyl-CoA thioesterase 0.56 QEN71_RS24000 peroxide stress protein YaaA low > 153
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS03270 acyl-CoA hydrolase 0.56 BPHYT_RS06780 hypothetical protein low > 109

Not shown: 10 genomes with orthologs for HER17_RS10965 only; 14 genomes with orthologs for HER17_RS02810 only