Conservation of cofitness between PS417_27810 and PS417_27610 in Pseudomonas simiae WCS417

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27810 ribonuclease PH 1.0 PS417_27610 hypothetical protein 0.32 9
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS29490 ribonuclease PH 0.97 PFLU_RS29295 YjbQ family protein low > 109
Pseudomonas fluorescens SBW25 1.00 PFLU_RS29490 ribonuclease PH 0.97 PFLU_RS29295 YjbQ family protein low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.97 Psyr_0213 RNAse PH 0.84 Psyr_0188 Protein of unknown function UPF0047 low > 86
Pseudomonas syringae pv. syringae B728a 0.97 Psyr_0213 RNAse PH 0.84 Psyr_0188 Protein of unknown function UPF0047 low > 86
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) 0.91 Pf1N1B4_2168 FIG004064: hypothetical protein 0.40 39
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_12500 ribonuclease PH 0.91 AO356_12710 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) 0.91 Pf6N2E2_4413 FIG004064: hypothetical protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_09260 ribonuclease PH 0.91 AO353_09065 hypothetical protein 0.34 27
Pseudomonas sp. RS175 0.97 PFR28_04420 Ribonuclease PH 0.90 PFR28_04381 hypothetical protein low > 88
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) 0.91 PfGW456L13_839 FIG004064: hypothetical protein low > 87
Pseudomonas stutzeri RCH2 0.92 Psest_3813 ribonuclease PH 0.84 Psest_3770 secondary thiamine-phosphate synthase enzyme low > 67
Pseudomonas sp. S08-1 0.91 OH686_13570 ribonuclease PH 0.81 OH686_13770 UPF0047 protein YjbQ low > 80
Marinobacter adhaerens HP15 0.70 HP15_300 ribonuclease PH 0.64 HP15_721 protein belonging to uncharacterized protein family UPF0047 low > 73
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_0588 ribonuclease PH 0.38 B158DRAFT_2014 secondary thiamine-phosphate synthase enzyme low > 40
Dickeya dadantii 3937 0.69 DDA3937_RS20540 ribonuclease PH 0.56 DDA3937_RS17595 YjbQ family protein low > 74
Serratia liquefaciens MT49 0.66 IAI46_24850 ribonuclease PH 0.51 IAI46_22925 YjbQ family protein low > 86
Shewanella loihica PV-4 0.66 Shew_3488 ribonuclease PH (RefSeq) 0.57 Shew_1893 hypothetical protein (RefSeq) low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.55 GFF1425 FIG004064: hypothetical protein low > 78
Escherichia coli ECOR27 0.66 NOLOHH_07470 rph ribonuclease PH 0.60 NOLOHH_05155 yjbQ UPF0047 protein YjbQ low > 57
Escherichia coli ECRC101 0.66 MCAODC_06100 rph ribonuclease PH 0.60 MCAODC_03415 yjbQ UPF0047 protein YjbQ — —
Shewanella amazonensis SB2B 0.66 Sama_0320 tRNA nucleotidyltransferase (RefSeq) 0.61 Sama_1665 hypothetical protein (RefSeq) low > 62
Escherichia coli Nissle 1917 0.66 ECOLIN_RS20755 ribonuclease PH 0.60 ECOLIN_RS23475 secondary thiamine-phosphate synthase enzyme YjbQ low > 52
Escherichia coli ECOR38 0.66 HEPCGN_14410 rph ribonuclease PH 0.60 HEPCGN_11520 yjbQ UPF0047 protein YjbQ low > 85
Escherichia coli ECRC101 0.66 OKFHMN_15590 rph ribonuclease PH 0.60 OKFHMN_12905 yjbQ UPF0047 protein YjbQ — —
Escherichia fergusonii Becca 0.66 EFB2_00170 Ribonuclease PH 0.60 EFB2_04535 hypothetical protein low > 86
Escherichia coli ECRC98 0.66 JDDGAC_19215 rph ribonuclease PH 0.60 JDDGAC_16540 yjbQ UPF0047 protein YjbQ — —
Escherichia coli ECRC99 0.66 KEDOAH_12555 rph ribonuclease PH 0.60 KEDOAH_15245 yjbQ UPF0047 protein YjbQ — —
Escherichia coli ECRC102 0.66 NIAGMN_13350 rph ribonuclease PH 0.60 NIAGMN_10750 yjbQ UPF0047 protein YjbQ — —
Escherichia coli BL21 0.66 ECD_03500 ribonuclease PH 0.60 ECD_03928 thiamine phosphate synthase low > 60
Escherichia coli ECRC62 0.66 BNILDI_04045 rph ribonuclease PH 0.59 BNILDI_06370 yjbQ UPF0047 protein YjbQ — —
Enterobacter sp. TBS_079 0.66 MPMX20_00092 Ribonuclease PH 0.61 MPMX20_00274 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3893 ribonuclease PH 0.61 EX28DRAFT_4248 secondary thiamine-phosphate synthase enzyme low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_00059 Ribonuclease PH 0.60 OHPLBJKB_03985 hypothetical protein low > 73
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS03645 ribonuclease PH 0.43 QEN71_RS15455 secondary thiamine-phosphate synthase enzyme YjbQ low > 153
Pectobacterium carotovorum WPP14 0.65 HER17_RS20855 ribonuclease PH 0.59 HER17_RS03555 secondary thiamine-phosphate synthase enzyme YjbQ 0.69 11
Klebsiella michiganensis M5al 0.65 BWI76_RS27390 ribonuclease PH 0.59 BWI76_RS01935 thiamin phosphate synthase low > 92
Pantoea sp. MT58 0.65 IAI47_00595 ribonuclease PH 0.60 IAI47_17830 YjbQ family protein low > 76
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS11900 ribonuclease PH 0.43 ABZR86_RS10440 secondary thiamine-phosphate synthase enzyme YjbQ low > 74
Escherichia coli BW25113 0.64 b3643 rph ribonuclease PH (NCBI) 0.60 b4056 yjbQ hypothetical protein (NCBI) low > 76
Paraburkholderia graminis OAS925 0.64 ABIE53_003234 ribonuclease PH 0.43 ABIE53_005988 secondary thiamine-phosphate synthase enzyme low > 113
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS15325 ribonuclease PH 0.43 BPHYT_RS26250 hypothetical protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_04008 RNAse PH 0.42 H281DRAFT_02804 secondary thiamine-phosphate synthase enzyme low > 103
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_01115 ribonuclease PH 0.67 CSW01_01960 hypothetical protein low > 62
Rhizobium sp. OAE497 0.62 ABIE40_RS01640 ribonuclease PH 0.37 ABIE40_RS12650 secondary thiamine-phosphate synthase enzyme YjbQ low > 107
Rhodanobacter denitrificans FW104-10B01 0.62 LRK54_RS11745 ribonuclease PH 0.40 LRK54_RS04275 secondary thiamine-phosphate synthase enzyme YjbQ low > 59
Rhodanobacter denitrificans MT42 0.62 LRK55_RS11470 ribonuclease PH 0.40 LRK55_RS04050 secondary thiamine-phosphate synthase enzyme YjbQ low > 63
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_12150 rph ribonuclease PH 0.40 OKGIIK_11150 yjbQ secondary thiamine-phosphate synthase — —
Sinorhizobium meliloti 1021 0.62 SMc01144 ribonuclease PH 0.39 SMc01559 hypothetical protein low > 103
Agrobacterium fabrum C58 0.61 Atu0327 ribonuclease PH 0.35 Atu2164 hypothetical protein — —
Bosea sp. OAE506 0.59 ABIE41_RS03295 ribonuclease PH 0.38 ABIE41_RS12025 secondary thiamine-phosphate synthase enzyme YjbQ low > 77
Azospirillum brasilense Sp245 0.58 AZOBR_RS02205 ribonuclease PH 0.42 AZOBR_RS06035 hypothetical protein low > 97
Rhodopseudomonas palustris CGA009 0.57 TX73_001710 ribonuclease PH 0.40 TX73_004380 secondary thiamine-phosphate synthase enzyme YjbQ low > 86
Azospirillum sp. SherDot2 0.56 MPMX19_02576 Ribonuclease PH 0.38 MPMX19_00792 hypothetical protein low > 112
Phaeobacter inhibens DSM 17395 0.55 PGA1_c35030 ribonuclease PH 0.40 PGA1_c08850 secondary thiamine-phosphate synthase enzyme low > 62
Synechococcus elongatus PCC 7942 0.49 Synpcc7942_1073 rph ribonuclease PH 0.40 Synpcc7942_0078 hypothetical protein low > 38

Not shown: 33 genomes with orthologs for PS417_27810 only; 11 genomes with orthologs for PS417_27610 only