Conservation of cofitness between Psest_3128 and Psest_0514 in Pseudomonas stutzeri RCH2

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3128 Protein-disulfide isomerase 1.0 Psest_0514 lytic murein transglycosylase B 0.41 1
Pseudomonas sp. S08-1 0.78 OH686_17755 Thiol:disulfide interchange protein DsbC 0.68 OH686_09310 lytic murein transglycosylase B — —
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_1289 Glutaredoxin 0.68 Psyr_4363 membrane-bound lytic murein transglycosylase B — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_1289 Glutaredoxin 0.68 Psyr_4363 membrane-bound lytic murein transglycosylase B — —
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_3012 Thiol:disulfide interchange protein DsbC 0.69 Pf1N1B4_2694 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Pseudomonas putida KT2440 0.60 PP_1469 Thiol:disulfide interchange protein DsbC 0.68 PP_4805 membrane-bound lytic murein transglycosylase B low > 96
Pseudomonas simiae WCS417 0.57 PS417_22890 protein-disulfide isomerase 0.71 PS417_24715 lytic transglycosylase — —
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_1722 Thiol:disulfide interchange protein DsbC 0.70 PfGW456L13_1362 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Pseudomonas fluorescens SBW25 0.57 PFLU_RS24555 thioredoxin fold domain-containing protein 0.71 PFLU_RS26645 lytic murein transglycosylase B low > 109
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS24555 thioredoxin fold domain-containing protein 0.71 PFLU_RS26645 lytic murein transglycosylase B low > 109
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_3144 Thiol:disulfide interchange protein DsbC 0.70 Pf6N2E2_4999 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 103
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_04360 protein-disulfide isomerase 0.70 AO353_06465 lytic transglycosylase low > 101
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_06380 protein-disulfide isomerase 0.69 AO356_15320 lytic transglycosylase low > 104
Pseudomonas sp. RS175 0.54 PFR28_00332 Thiol:disulfide interchange protein DsbC 0.69 PFR28_03866 Membrane-bound lytic murein transglycosylase B 0.64 11
Shewanella amazonensis SB2B 0.37 Sama_2738 thiol:disulfide interchange protein DsbC (RefSeq) 0.38 Sama_2590 lytic murein transglycosylase B (RefSeq) low > 62
Shewanella loihica PV-4 0.36 Shew_0771 thiol:disulfide interchange protein DsbC (RefSeq) 0.39 Shew_2937 lytic murein transglycosylase B (RefSeq) — —
Shewanella oneidensis MR-1 0.36 SO0951 dsbC thiol:disulfide interchange protein DsbC (NCBI ptt file) 0.37 SO1166 membrane-bound lytic transglycosylase, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.36 Shewana3_3330 thiol:disulfide interchange protein DsbC (RefSeq) 0.38 Shewana3_0993 lytic murein transglycosylase B (RefSeq) low > 73
Dickeya dianthicola 67-19 0.35 HGI48_RS03445 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.37 HGI48_RS03780 lytic murein transglycosylase B low > 71
Dickeya dianthicola ME23 0.35 DZA65_RS03490 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.37 DZA65_RS03910 lytic murein transglycosylase B low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF2990 Thiol:disulfide interchange protein DsbC 0.39 GFF4695 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 78
Dickeya dadantii 3937 0.35 DDA3937_RS03305 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.37 DDA3937_RS03745 lytic murein transglycosylase B low > 74
Escherichia coli BW25113 0.35 b2893 dsbC protein disulfide isomerase II (NCBI) 0.39 b2701 mltB membrane-bound lytic murein transglycosylase B (NCBI) low > 76
Escherichia coli BL21 0.35 ECD_02725 protein disulfide isomerase II 0.39 ECD_02551 membrane-bound lytic murein transglycosylase B low > 60
Erwinia tracheiphila SCR3 0.34 LU632_RS05980 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.36 LU632_RS15745 mltB lytic murein transglycosylase B low > 74
Escherichia coli Nissle 1917 0.34 ECOLIN_RS16120 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.39 ECOLIN_RS15070 lytic murein transglycosylase B — —
Pectobacterium carotovorum WPP14 0.34 HER17_RS17885 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.38 HER17_RS16185 lytic murein transglycosylase B low > 75
Escherichia fergusonii Becca 0.34 EFB2_01008 Thiol:disulfide interchange protein DsbC 0.39 EFB2_01223 Membrane-bound lytic murein transglycosylase B low > 86
Rahnella sp. WP5 0.34 EX31_RS13475 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.38 EX31_RS07810 lytic murein transglycosylase B low > 89
Klebsiella michiganensis M5al 0.34 BWI76_RS23810 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.38 BWI76_RS22210 murein transglycosylase B low > 92
Enterobacter asburiae PDN3 0.34 EX28DRAFT_2944 Protein-disulfide isomerase 0.39 EX28DRAFT_2790 lytic murein transglycosylase B 0.59 23
Serratia liquefaciens MT49 0.33 IAI46_20725 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.39 IAI46_18155 lytic murein transglycosylase B low > 86
Rhodanobacter denitrificans MT42 0.33 LRK55_RS04505 DsbC family protein 0.40 LRK55_RS06245 lytic murein transglycosylase B low > 63
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS04725 DsbC family protein 0.40 LRK54_RS06500 lytic murein transglycosylase B low > 59
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS19230 DsbC family protein 0.39 ABZR86_RS17480 lytic murein transglycosylase B low > 74
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_11510 dsbG disulfide bond formation protein DsbC 0.38 OKGIIK_00080 mltB lytic murein transglycosylase B low > 52
Pantoea sp. MT58 0.33 IAI47_03825 bifunctional protein-disulfide isomerase/oxidoreductase DsbC 0.37 IAI47_04275 lytic murein transglycosylase B low > 76
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_2266 Protein-disulfide isomerase 0.41 B158DRAFT_0081 lytic murein transglycosylase B low > 40
Ralstonia solanacearum PSI07 0.23 RPSI07_RS10690 thiol:disulfide interchange protein 0.31 RPSI07_RS19640 lytic murein transglycosylase B low > 81
Ralstonia solanacearum GMI1000 0.22 RS_RS14490 thiol:disulfide interchange protein 0.31 RS_RS04565 lytic murein transglycosylase B low > 80
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS02190 DsbC family protein 0.31 ABZR87_RS09520 lytic murein transglycosylase B low > 80
Acidovorax sp. GW101-3H11 0.21 Ac3H11_4004 Thiol:disulfide interchange protein DsbC 0.33 Ac3H11_3197 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 79
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS06540 thiol:disulfide interchange protein 0.31 RALBFv3_RS13830 lytic murein transglycosylase B low > 76
Ralstonia solanacearum UW163 0.21 UW163_RS07085 thiol:disulfide interchange protein 0.31 UW163_RS15980 lytic murein transglycosylase B — —
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS23895 hypothetical protein 0.35 RR42_RS04540 lytic transglycosylase low > 128
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS17430 thiol:disulfide interchange protein 0.33 BPHYT_RS14840 lytic transglycosylase 0.57 4
Herbaspirillum seropedicae SmR1 0.17 HSERO_RS20955 thiol:disulfide interchange protein 0.38 HSERO_RS04945 murein transglycosylase low > 78
Dechlorosoma suillum PS 0.16 Dsui_1091 protein-disulfide isomerase 0.36 Dsui_1972 lytic murein transglycosylase B low > 51

Not shown: 19 genomes with orthologs for Psest_3128 only; 2 genomes with orthologs for Psest_0514 only