Conservation of cofitness between GFF1669 and GFF4337 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1669 Signal transduction histidine kinase CheA (EC 2.7.3.-) 1.0 GFF4337 FIG001943: hypothetical protein YajQ 0.56 2
Escherichia coli ECOR38 0.84 HEPCGN_04540 cheA chemotaxis protein CheA 0.92 HEPCGN_07020 yajQ nucleotide binding protein YajQ low > 87
Escherichia coli ECRC62 0.84 BNILDI_15350 cheA chemotaxis protein CheA 0.92 BNILDI_22755 yajQ nucleotide binding protein YajQ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_01840 Chemotaxis protein CheA 0.92 OHPLBJKB_03250 hypothetical protein low > 73
Escherichia coli ECOR27 0.84 NOLOHH_16560 cheA chemotaxis protein CheA 0.92 NOLOHH_01340 yajQ nucleotide binding protein YajQ low > 75
Escherichia coli BL21 0.83 ECD_01859 fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein 0.92 ECD_00374 phage Phi6 host factor, ATP/GTP binding protein low > 61
Escherichia coli BW25113 0.83 b1888 cheA fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein (NCBI) 0.92 b0426 yajQ orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC98 0.83 JDDGAC_00695 cheA chemotaxis protein CheA 0.92 JDDGAC_12045 yajQ nucleotide binding protein YajQ low > 86
Escherichia coli ECRC102 0.83 NIAGMN_01940 cheA chemotaxis protein CheA 0.92 NIAGMN_06445 yajQ nucleotide binding protein YajQ — —
Escherichia coli ECRC99 0.83 KEDOAH_01985 cheA chemotaxis protein CheA 0.92 KEDOAH_19575 yajQ nucleotide binding protein YajQ — —
Escherichia coli ECRC101 0.83 MCAODC_19285 cheA chemotaxis protein CheA 0.92 MCAODC_27615 yajQ nucleotide binding protein YajQ 0.60 5
Escherichia fergusonii Becca 0.83 EFB2_02055 Chemotaxis protein CheA 0.92 EFB2_03631 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.83 ECOLIN_RS10780 chemotaxis protein CheA 0.92 ECOLIN_RS02565 nucleotide binding protein YajQ — —
Escherichia coli ECRC100 0.83 OKFHMN_26120 cheA chemotaxis protein CheA 0.92 OKFHMN_08390 yajQ nucleotide binding protein YajQ — —
Enterobacter sp. TBS_079 0.83 MPMX20_02798 Chemotaxis protein CheA 0.95 MPMX20_01017 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.83 EX28DRAFT_0662 Chemotaxis protein histidine kinase and related kinases 0.95 EX28DRAFT_2545 Uncharacterized protein conserved in bacteria low > 76
Erwinia tracheiphila SCR3 0.75 LU632_RS13560 cheA chemotaxis protein CheA 0.79 LU632_RS18450 YajQ family cyclic di-GMP-binding protein low > 74
Pantoea sp. MT58 0.75 IAI47_08300 chemotaxis protein CheA 0.77 IAI47_14710 YajQ family cyclic di-GMP-binding protein low > 76
Dickeya dadantii 3937 0.73 DDA3937_RS13545 chemotaxis protein CheA 0.75 DDA3937_RS05560 YajQ family cyclic di-GMP-binding protein low > 74
Dickeya dianthicola ME23 0.72 DZA65_RS14075 chemotaxis protein CheA 0.75 DZA65_RS05945 YajQ family cyclic di-GMP-binding protein low > 75
Pectobacterium carotovorum WPP14 0.72 HER17_RS08100 chemotaxis protein CheA 0.78 HER17_RS15905 YajQ family cyclic di-GMP-binding protein low > 75
Dickeya dianthicola 67-19 0.72 HGI48_RS13590 chemotaxis protein CheA 0.76 HGI48_RS05620 YajQ family cyclic di-GMP-binding protein — —
Rahnella sp. WP5 0.71 EX31_RS11405 chemotaxis protein CheA 0.77 EX31_RS22185 YajQ family cyclic di-GMP-binding protein low > 89
Serratia liquefaciens MT49 0.71 IAI46_16040 chemotaxis protein CheA 0.77 IAI46_04955 YajQ family cyclic di-GMP-binding protein low > 86
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS35805 chemotaxis protein CheA 0.39 RR42_RS17155 nucleotide-binding protein — —
Variovorax sp. SCN45 0.55 GFF5763 Signal transduction histidine kinase CheA 0.45 GFF3099 UPF0234 protein Yitk — —
Castellaniella sp019104865 MT123 0.52 ABCV34_RS05835 chemotaxis protein CheA 0.45 ABCV34_RS15080 YajQ family cyclic di-GMP-binding protein low > 48
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS17960 chemotaxis protein CheA 0.41 ABZR87_RS00820 YajQ family cyclic di-GMP-binding protein low > 80
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS14955 chemotaxis protein 0.41 HSERO_RS07165 nucleotide-binding protein low > 78
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_05742 CheA signal transduction histidine kinase 0.38 H281DRAFT_04122 hypothetical protein — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS06255 chemotaxis protein CheA 0.42 RPSI07_RS12140 YajQ family cyclic di-GMP-binding protein — —
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS17390 chemotaxis protein CheA 0.41 RALBFv3_RS05160 YajQ family cyclic di-GMP-binding protein low > 76
Ralstonia solanacearum UW163 0.41 UW163_RS21760 chemotaxis protein CheA 0.41 UW163_RS08465 YajQ family cyclic di-GMP-binding protein — —
Ralstonia solanacearum GMI1000 0.40 RS_RS23920 chemotaxis protein CheA 0.42 RS_RS12780 nucleotide-binding protein low > 80
Shewanella sp. ANA-3 0.39 Shewana3_2218 CheA signal transduction histidine kinases (RefSeq) 0.64 Shewana3_0782 putative nucleotide-binding protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.39 SO2121 cheA chemotaxis protein CheA (NCBI ptt file) 0.62 SO3815 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.35 Sama_3495 putative CheA signal transduction histidine kinase (RefSeq) 0.60 Sama_2557 putative nucleotide-binding protein (RefSeq) low > 62
Shewanella loihica PV-4 0.35 Shew_0113 CheA signal transduction histidine kinase (RefSeq) 0.62 Shew_2893 nucleotide-binding protein (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_19550 chemotaxis protein CheA 0.60 CSW01_07570 nucleotide-binding protein low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF1476 Signal transduction histidine kinase CheA (EC 2.7.3.-) 0.43 GFF292 FIG001943: hypothetical protein YajQ — —
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.2862.1 Signal transduction histidine kinase CheA (EC 2.7.3.-) 0.46 Xcc-8004.4605.1 FIG001943: hypothetical protein YajQ low > 74
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS22230 chemotaxis protein CheA 0.45 ABZR86_RS00410 YajQ family cyclic di-GMP-binding protein low > 74
Rhodanobacter denitrificans MT42 0.30 LRK55_RS13380 chemotaxis protein CheA 0.45 LRK55_RS14390 YajQ family cyclic di-GMP-binding protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS13640 chemotaxis protein CheA 0.45 LRK54_RS14675 YajQ family cyclic di-GMP-binding protein low > 59
Desulfovibrio vulgaris Hildenborough JW710 0.28 DVU1594 cheA-1 chemotaxis protein CheA (TIGR) 0.41 DVU1981 conserved hypothetical protein (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.28 DvMF_0467 CheA signal transduction histidine kinase (RefSeq) 0.39 DvMF_3058 putative nucleotide-binding protein (RefSeq) low > 51
Pseudomonas sp. RS175 0.28 PFR28_02512 Chemotaxis protein CheA 0.48 PFR28_03425 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_22670 chemotaxis protein CheA 0.49 AO356_17960 nucleotide-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_418 Signal transduction histidine kinase CheA (EC 2.7.3.-) 0.49 Pf6N2E2_5522 FIG001943: hypothetical protein YajQ low > 103
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS24990 chemotaxis protein CheA 0.47 PFLU_RS24150 YajQ family cyclic di-GMP-binding protein low > 109
Pseudomonas fluorescens SBW25 0.27 PFLU_RS24990 chemotaxis protein CheA 0.47 PFLU_RS24150 YajQ family cyclic di-GMP-binding protein low > 109
Marinobacter adhaerens HP15 0.24 HP15_2298 chemotaxis histidine kinase 0.50 HP15_2364 nucleotide-binding protein low > 73
Rhodanobacter sp. FW510-T8 0.19 OKGIIK_02845 Histidine kinase 0.45 OKGIIK_03500 yajQ YajQ family cyclic di-GMP-binding protein low > 52

Not shown: 4 genomes with orthologs for GFF1669 only; 28 genomes with orthologs for GFF4337 only