Conservation of cofitness between PS417_26990 and PS417_19650 in Pseudomonas simiae WCS417

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_26990 RNA pyrophosphohydrolase 1.0 PS417_19650 chemotaxis protein CheW 0.29 12
Pseudomonas fluorescens SBW25 1.00 PFLU_RS28650 RNA pyrophosphohydrolase 0.99 PFLU_RS21615 chemotaxis protein CheW low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS28650 RNA pyrophosphohydrolase 0.99 PFLU_RS21615 chemotaxis protein CheW low > 109
Pseudomonas syringae pv. syringae B728a 0.99 Psyr_4843 NUDIX hydrolase 0.92 Psyr_3428 CheW-like protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.99 Psyr_4843 NUDIX hydrolase 0.92 Psyr_3428 CheW-like protein low > 86
Pseudomonas putida KT2440 0.99 PP_5146 RNA pyrophosphohydrolase 0.90 PP_4332 Chemotaxis protein CheW low > 96
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_08470 RNA pyrophosphohydrolase 0.90 AO353_18830 chemotaxis protein CheW low > 101
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_2283 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) 0.86 Pf1N1B4_3635 Positive regulator of CheA protein activity (CheW) — —
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_952 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) 0.87 PfGW456L13_4321 Positive regulator of CheA protein activity (CheW) low > 87
Pseudomonas sp. RS175 0.98 PFR28_04831 RNA pyrophosphohydrolase 0.86 PFR28_00861 Chemotaxis protein CheW low > 88
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_10345 RNA pyrophosphohydrolase 0.87 AO356_03685 chemotaxis protein CheW low > 104
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_3941 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) 0.87 Pf6N2E2_2564 Positive regulator of CheA protein activity (CheW) low > 103
Pseudomonas sp. S08-1 0.93 OH686_11425 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase 0.84 OH686_02685 Positive regulator of CheA protein activity (CheW) low > 80
Pseudomonas stutzeri RCH2 0.92 Psest_3863 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.91 Psest_1749 Chemotaxis signal transduction protein — —
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2905 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.32 EX28DRAFT_0663 Chemotaxis signal transduction protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_00900 RNA pyrophosphohydrolase 0.32 OHPLBJKB_01841 Chemotaxis protein CheW — —
Escherichia coli Nissle 1917 0.70 ECOLIN_RS15880 RNA pyrophosphohydrolase 0.32 ECOLIN_RS10775 chemotaxis protein CheW — —
Escherichia coli BL21 0.70 ECD_02678 RNA pyrophosphohydrolase 0.32 ECD_01858 purine-binding chemotaxis protein — —
Escherichia coli BW25113 0.70 b2830 nudH dinucleoside polyphosphate hydrolase (NCBI) 0.32 b1887 cheW purine-binding chemotaxis protein (NCBI) low > 76
Escherichia fergusonii Becca 0.70 EFB2_01054 RNA pyrophosphohydrolase 0.32 EFB2_02056 Chemotaxis protein CheW — —
Escherichia coli ECRC101 0.70 OKFHMN_20000 rppH RNA pyrophosphohydrolase 0.32 OKFHMN_26125 cheW chemotaxis protein CheW — —
Escherichia coli ECRC62 0.70 BNILDI_10365 rppH RNA pyrophosphohydrolase 0.32 BNILDI_15355 cheW chemotaxis protein CheW — —
Escherichia coli ECRC98 0.70 JDDGAC_23665 rppH RNA pyrophosphohydrolase 0.32 JDDGAC_00700 cheW chemotaxis protein CheW — —
Dickeya dianthicola ME23 0.70 DZA65_RS05295 RNA pyrophosphohydrolase 0.32 DZA65_RS14070 chemotaxis protein CheW low > 75
Escherichia coli ECOR27 0.70 NOLOHH_11885 rppH RNA pyrophosphohydrolase 0.32 NOLOHH_16565 cheW chemotaxis protein CheW — —
Dickeya dadantii 3937 0.70 DDA3937_RS04945 RNA pyrophosphohydrolase 0.32 DDA3937_RS13540 chemotaxis protein CheW low > 74
Dickeya dianthicola 67-19 0.70 HGI48_RS04955 RNA pyrophosphohydrolase 0.32 HGI48_RS13585 chemotaxis protein CheW — —
Escherichia coli ECRC101 0.70 MCAODC_10525 rppH RNA pyrophosphohydrolase 0.32 MCAODC_19280 cheW chemotaxis protein CheW — —
Escherichia coli ECOR38 0.70 HEPCGN_19255 rppH RNA pyrophosphohydrolase 0.32 HEPCGN_04545 cheW chemotaxis protein CheW — —
Escherichia coli ECRC99 0.70 KEDOAH_08130 rppH RNA pyrophosphohydrolase 0.32 KEDOAH_01980 cheW chemotaxis protein CheW — —
Escherichia coli ECRC102 0.70 NIAGMN_17770 rppH RNA pyrophosphohydrolase 0.32 NIAGMN_01935 cheW chemotaxis protein CheW — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF1312 'Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)' transl_table=11 0.33 GFF1668 Positive regulator of CheA protein activity (CheW) low > 78
Pectobacterium carotovorum WPP14 0.69 HER17_RS16585 RNA pyrophosphohydrolase 0.33 HER17_RS08105 chemotaxis protein CheW — —
Erwinia tracheiphila SCR3 0.69 LU632_RS06105 rppH RNA pyrophosphohydrolase 0.32 LU632_RS13555 cheW chemotaxis protein CheW — —
Serratia liquefaciens MT49 0.69 IAI46_20455 RNA pyrophosphohydrolase 0.32 IAI46_16035 chemotaxis protein CheW low > 86
Pantoea sp. MT58 0.69 IAI47_03915 RNA pyrophosphohydrolase 0.32 IAI47_08305 chemotaxis protein CheW low > 76
Rahnella sp. WP5 0.68 EX31_RS13205 RNA pyrophosphohydrolase 0.32 EX31_RS11400 chemotaxis protein CheW — —
Shewanella amazonensis SB2B 0.68 Sama_0863 dinucleoside polyphosphate hydrolase (RefSeq) 0.81 Sama_2272 purine-binding chemotaxis protein CheW (RefSeq) — —
Shewanella loihica PV-4 0.68 Shew_1038 dinucleoside polyphosphate hydrolase (RefSeq) 0.80 Shew_1391 CheW protein (RefSeq) — —
Alteromonas macleodii MIT1002 0.67 MIT1002_00647 RNA pyrophosphohydrolase 0.74 MIT1002_01110 Chemotaxis protein CheW low > 70
Shewanella oneidensis MR-1 0.66 SO1331 MutT/nudix family protein (NCBI ptt file) 0.80 SO3202 cheW-3 purine-binding chemotaxis protein CheW (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.66 Shewana3_3043 dinucleoside polyphosphate hydrolase (RefSeq) 0.80 Shewana3_1367 CheW protein (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS13805 RNA pyrophosphohydrolase 0.25 ABZR86_RS22225 chemotaxis protein CheW low > 74
Rhodanobacter denitrificans MT42 0.65 LRK55_RS08860 RNA pyrophosphohydrolase 0.30 LRK55_RS13390 chemotaxis protein CheW low > 63
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS09330 RNA pyrophosphohydrolase 0.30 LRK54_RS13650 chemotaxis protein CheW low > 59
Enterobacter sp. TBS_079 0.60 MPMX20_03693 RNA pyrophosphohydrolase 0.31 MPMX20_02797 Chemotaxis protein CheW — —
Castellaniella sp019104865 MT123 0.53 ABCV34_RS09820 RNA pyrophosphohydrolase 0.27 ABCV34_RS05830 chemotaxis protein CheW low > 48
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS01825 RNA pyrophosphohydrolase 0.33 HSERO_RS14950 purine-binding chemotaxis protein low > 78
Dechlorosoma suillum PS 0.51 Dsui_1325 ADP-ribose pyrophosphatase 0.34 Dsui_3476 chemotaxis signal transduction protein — —
Phaeobacter inhibens DSM 17395 0.35 PGA1_c29090 RNA pyrophosphohydrolase RppH 0.28 PGA1_262p02110 putative chemotaxis protein CheW — —
Azospirillum sp. SherDot2 0.34 MPMX19_01945 RNA pyrophosphohydrolase 0.29 MPMX19_06746 Chemotaxis protein CheW low > 112
Magnetospirillum magneticum AMB-1 0.31 AMB_RS01525 RNA pyrophosphohydrolase 0.24 AMB_RS01645 chemotaxis protein CheW low > 64
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_4001 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.33 Ga0059261_1082 Chemotaxis signal transduction protein low > 68
Bosea sp. OAE506 0.30 ABIE41_RS07545 RNA pyrophosphohydrolase 0.31 ABIE41_RS01675 chemotaxis protein CheW — —
Rhizobium sp. OAE497 0.28 ABIE40_RS18985 RNA pyrophosphohydrolase 0.32 ABIE40_RS15985 chemotaxis protein CheW low > 107
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS12500 RNA pyrophosphohydrolase 0.31 A4249_RS15570 chemotaxis protein CheW — —
Rhodopseudomonas palustris CGA009 0.27 TX73_000905 RNA pyrophosphohydrolase 0.27 TX73_000720 chemotaxis protein CheW low > 86
Caulobacter crescentus NA1000 0.27 CCNA_03553 diadenosine tetraphosphate (Ap4A) hydrolase 0.30 CCNA_00803 chemotaxis protein cheW low > 66
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03553 diadenosine tetraphosphate (Ap4A) hydrolase 0.30 CCNA_00803 chemotaxis protein cheW low > 67
Agrobacterium fabrum C58 0.26 Atu2772 Invasion protein A 0.31 Atu2075 chemotaxis protein low > 89
Sinorhizobium meliloti 1021 0.26 SMc03785 dinucleoside polyphosphate hydrolase 0.31 SMc03008 chemotaxis protein low > 103

Not shown: 6 genomes with orthologs for PS417_26990 only; 22 genomes with orthologs for PS417_19650 only