Conservation of cofitness between PS417_08090 and PS417_19650 in Pseudomonas simiae WCS417

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_08090 3-oxoacyl-ACP reductase 1.0 PS417_19650 chemotaxis protein CheW 0.31 2
Pseudomonas fluorescens SBW25 1.00 PFLU_RS08060 YciK family oxidoreductase 0.99 PFLU_RS21615 chemotaxis protein CheW low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS08060 YciK family oxidoreductase 0.99 PFLU_RS21615 chemotaxis protein CheW low > 109
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_358 Oxidoreductase, short chain dehydrogenase/reductase family 0.86 Pf1N1B4_3635 Positive regulator of CheA protein activity (CheW) — —
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_03500 3-oxoacyl-ACP reductase 0.87 AO356_03685 chemotaxis protein CheW low > 104
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_02105 3-oxoacyl-ACP reductase 0.90 AO353_18830 chemotaxis protein CheW — —
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_2169 Oxidoreductase, short chain dehydrogenase/reductase family 0.87 PfGW456L13_4321 Positive regulator of CheA protein activity (CheW) low > 87
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_2527 Oxidoreductase, short chain dehydrogenase/reductase family 0.87 Pf6N2E2_2564 Positive regulator of CheA protein activity (CheW) low > 103
Pseudomonas sp. RS175 0.85 PFR28_00899 putative oxidoreductase YciK 0.86 PFR28_00861 Chemotaxis protein CheW — —
Pseudomonas putida KT2440 0.82 PP_1763 putative oxidoreductase 0.90 PP_4332 Chemotaxis protein CheW 0.21 87
Pseudomonas stutzeri RCH2 0.82 Psest_2000 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.91 Psest_1749 Chemotaxis signal transduction protein low > 67
Pseudomonas sp. S08-1 0.81 OH686_20835 Oxidoreductase, short-chain dehydrogenase/reductase family 0.84 OH686_02685 Positive regulator of CheA protein activity (CheW) low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_3652 Short-chain dehydrogenase/reductase SDR 0.92 Psyr_3428 CheW-like protein low > 86
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_3652 Short-chain dehydrogenase/reductase SDR 0.92 Psyr_3428 CheW-like protein low > 86
Marinobacter adhaerens HP15 0.59 HP15_1225 oxidoreductase, short chain dehydrogenase/reductase family 0.77 HP15_2292 purine-binding chemotaxis protein CheW low > 73
Shewanella loihica PV-4 0.59 Shew_2409 short chain dehydrogenase (RefSeq) 0.80 Shew_1391 CheW protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.57 MIT1002_01965 putative oxidoreductase YciK 0.74 MIT1002_01110 Chemotaxis protein CheW low > 70
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_05390 YciK family oxidoreductase 0.70 CSW01_10300 chemotaxis protein CheW low > 62
Shewanella oneidensis MR-1 0.55 SO2935 oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file) 0.80 SO3202 cheW-3 purine-binding chemotaxis protein CheW (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.53 Shewana3_1528 short chain dehydrogenase (RefSeq) 0.80 Shewana3_1367 CheW protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.53 Sama_2121 short chain dehydrogenase (RefSeq) 0.81 Sama_2272 purine-binding chemotaxis protein CheW (RefSeq) low > 62
Rahnella sp. WP5 0.49 EX31_RS09910 YciK family oxidoreductase 0.32 EX31_RS11400 chemotaxis protein CheW low > 89
Dickeya dianthicola 67-19 0.47 HGI48_RS10510 YciK family oxidoreductase 0.32 HGI48_RS13585 chemotaxis protein CheW low > 71
Dickeya dadantii 3937 0.47 DDA3937_RS10510 YciK family oxidoreductase 0.32 DDA3937_RS13540 chemotaxis protein CheW low > 74
Dickeya dianthicola ME23 0.47 DZA65_RS10990 YciK family oxidoreductase 0.32 DZA65_RS14070 chemotaxis protein CheW low > 75
Pectobacterium carotovorum WPP14 0.47 HER17_RS10890 YciK family oxidoreductase 0.33 HER17_RS08105 chemotaxis protein CheW low > 75
Escherichia coli Nissle 1917 0.46 ECOLIN_RS07645 YciK family oxidoreductase 0.32 ECOLIN_RS10775 chemotaxis protein CheW — —
Escherichia coli BW25113 0.46 b1271 yciK short chain dehydrogenase (NCBI) 0.32 b1887 cheW purine-binding chemotaxis protein (NCBI) low > 76
Escherichia coli BL21 0.46 ECD_01247 putative EmrKY-TolC system oxoacyl-(acyl carrier protein) reductase 0.32 ECD_01858 purine-binding chemotaxis protein — —
Escherichia fergusonii Becca 0.46 EFB2_02656 putative oxidoreductase YciK 0.32 EFB2_02056 Chemotaxis protein CheW low > 86
Escherichia coli ECRC62 0.46 BNILDI_18435 yciK YciK family oxidoreductase 0.32 BNILDI_15355 cheW chemotaxis protein CheW — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF2717 YciK-like oxidoreductase 0.33 GFF1668 Positive regulator of CheA protein activity (CheW) low > 78
Escherichia coli ECRC101 0.45 OKFHMN_02620 yciK YciK family oxidoreductase 0.32 OKFHMN_26125 cheW chemotaxis protein CheW — —
Escherichia coli ECRC98 0.45 JDDGAC_05165 yciK YciK family oxidoreductase 0.32 JDDGAC_00700 cheW chemotaxis protein CheW — —
Escherichia coli ECRC102 0.45 NIAGMN_26790 yciK YciK family oxidoreductase 0.32 NIAGMN_01935 cheW chemotaxis protein CheW — —
Enterobacter sp. TBS_079 0.45 MPMX20_02505 putative oxidoreductase YciK 0.31 MPMX20_02797 Chemotaxis protein CheW low > 85
Escherichia coli ECRC101 0.45 MCAODC_15645 yciK YciK family oxidoreductase 0.32 MCAODC_19280 cheW chemotaxis protein CheW — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02413 putative oxidoreductase YciK 0.32 OHPLBJKB_01841 Chemotaxis protein CheW low > 73
Escherichia coli ECRC99 0.45 KEDOAH_26145 yciK YciK family oxidoreductase 0.32 KEDOAH_01980 cheW chemotaxis protein CheW — —
Escherichia coli ECOR27 0.45 NOLOHH_20285 yciK YciK family oxidoreductase 0.32 NOLOHH_16565 cheW chemotaxis protein CheW — —
Erwinia tracheiphila SCR3 0.45 LU632_RS12725 YciK family oxidoreductase 0.32 LU632_RS13555 cheW chemotaxis protein CheW low > 74
Escherichia coli ECOR38 0.45 HEPCGN_25580 yciK YciK family oxidoreductase 0.32 HEPCGN_04545 cheW chemotaxis protein CheW low > 85
Enterobacter asburiae PDN3 0.45 EX28DRAFT_0942 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.32 EX28DRAFT_0663 Chemotaxis signal transduction protein low > 76
Serratia liquefaciens MT49 0.44 IAI46_13985 YciK family oxidoreductase 0.32 IAI46_16035 chemotaxis protein CheW low > 86
Pantoea sp. MT58 0.44 IAI47_09220 YciK family oxidoreductase 0.32 IAI47_08305 chemotaxis protein CheW low > 76
Rhodanobacter denitrificans MT42 0.36 LRK55_RS13545 SDR family NAD(P)-dependent oxidoreductase 0.30 LRK55_RS13390 chemotaxis protein CheW low > 63
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS13830 SDR family NAD(P)-dependent oxidoreductase 0.30 LRK54_RS13650 chemotaxis protein CheW low > 59
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_01728 short chain dehydrogenase 0.30 CCNA_00803 chemotaxis protein cheW low > 67
Caulobacter crescentus NA1000 0.32 CCNA_01728 short chain dehydrogenase 0.30 CCNA_00803 chemotaxis protein cheW low > 66
Agrobacterium fabrum C58 0.31 Atu1074 NAD/NADP dependent oxidoreductase 0.31 Atu2075 chemotaxis protein low > 89
Magnetospirillum magneticum AMB-1 0.30 AMB_RS10540 KR domain-containing protein 0.24 AMB_RS01645 chemotaxis protein CheW low > 64
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS09815 SDR family NAD(P)-dependent oxidoreductase 0.25 ABZR86_RS22225 chemotaxis protein CheW low > 74
Rhizobium sp. OAE497 0.30 ABIE40_RS06265 SDR family NAD(P)-dependent oxidoreductase 0.32 ABIE40_RS15985 chemotaxis protein CheW low > 107
Lysobacter sp. OAE881 0.29 ABIE51_RS15375 SDR family NAD(P)-dependent oxidoreductase 0.30 ABIE51_RS16920 chemotaxis protein CheW low > 62
Sinorhizobium meliloti 1021 0.28 SMc00553 oxidoreductase 0.31 SMc03008 chemotaxis protein — —
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS03730 SDR family NAD(P)-dependent oxidoreductase 0.31 A4249_RS15570 chemotaxis protein CheW low > 48
Rhodopseudomonas palustris CGA009 0.27 TX73_015995 SDR family NAD(P)-dependent oxidoreductase 0.27 TX73_000720 chemotaxis protein CheW — —
Bosea sp. OAE506 0.26 ABIE41_RS17815 SDR family NAD(P)-dependent oxidoreductase 0.31 ABIE41_RS01675 chemotaxis protein CheW low > 77
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_3625 Short-chain dehydrogenases of various substrate specificities 0.33 Ga0059261_1082 Chemotaxis signal transduction protein low > 68
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.2015.1 Short chain dehydrogenase 0.33 Xcc-8004.2882.1 Positive regulator of CheA protein activity (CheW) low > 74

Not shown: 5 genomes with orthologs for PS417_08090 only; 23 genomes with orthologs for PS417_19650 only