| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF4153 | | Type I secretion system, membrane fusion protein LapC | 1.0 | GFF3479 | | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) | 0.43 | 9 |
| Enterobacter asburiae PDN3 | 0.82 | EX28DRAFT_2734 | | Multidrug resistance efflux pump | 0.84 | EX28DRAFT_1772 | | methionine-R-sulfoxide reductase | low | > 76 |
| Enterobacter sp. TBS_079 | 0.81 | MPMX20_03525 | | Type I secretion system membrane fusion protein PrsE | 0.83 | MPMX20_01845 | | Peptide methionine sulfoxide reductase MsrB | low | > 85 |
| Klebsiella michiganensis M5al | 0.68 | BWI76_RS10025 | | secretion protein HlyD | 0.88 | BWI76_RS11515 | | peptide-methionine (R)-S-oxide reductase | low | > 92 |
| Pseudomonas putida KT2440 | 0.61 | PP_0803 | | Protein secretion ABC efflux system, membrane fusion protein | 0.51 | PP_1873 | | Peptide methionine sulfoxide reductase MsrB | low | > 96 |
| Rhizobium sp. OAE497 | 0.59 | ABIE40_RS24890 | | HlyD family type I secretion periplasmic adaptor subunit | 0.48 | ABIE40_RS04980 | | peptide-methionine (R)-S-oxide reductase MsrB | low | > 107 |
| Variovorax sp. SCN45 | 0.58 | GFF5852 | | Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC | 0.46 | GFF1329 | | Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) | low | > 127 |
| Escherichia coli ECRC99 | 0.56 | KEDOAH_19930 | emrA | hemolysin D | 0.89 | KEDOAH_01375 | msrB | Peptide methionine sulfoxide reductase MsrB | — | — |
| Escherichia coli ECRC98 | 0.56 | JDDGAC_11685 | emrA | hemolysin D | 0.89 | JDDGAC_01310 | msrB | Peptide methionine sulfoxide reductase MsrB | low | > 86 |
| Escherichia coli ECRC102 | 0.56 | NIAGMN_06090 | emrA | hemolysin D | 0.89 | NIAGMN_01330 | msrB | Peptide methionine sulfoxide reductase MsrB | — | — |
| Escherichia coli ECRC100 | 0.56 | OKFHMN_08040 | emrA | hemolysin D | 0.89 | OKFHMN_26735 | msrB | Peptide methionine sulfoxide reductase MsrB | low | > 80 |
| Escherichia coli ECRC101 | 0.56 | MCAODC_27255 | emrA | hemolysin D | 0.89 | MCAODC_18675 | msrB | Peptide methionine sulfoxide reductase MsrB | low | > 87 |
| Escherichia coli ECOR38 | 0.56 | HEPCGN_06675 | emrA | hemolysin D | 0.89 | HEPCGN_05125 | msrB | Peptide methionine sulfoxide reductase MsrB | low | > 87 |
| Acinetobacter radioresistens SK82 | 0.53 | MPMX26_01961 | | Type I secretion system membrane fusion protein PrsE | 0.53 | MPMX26_01870 | | Peptide methionine sulfoxide reductase MsrB | — | — |
| Pantoea sp. MT58 | 0.51 | IAI47_06510 | | HlyD family efflux transporter periplasmic adaptor subunit | 0.76 | IAI47_08950 | | peptide-methionine (R)-S-oxide reductase MsrB | low | > 76 |
| Rahnella sp. WP5 | 0.49 | EX31_RS19255 | | HlyD family efflux transporter periplasmic adaptor subunit | 0.70 | EX31_RS06285 | | peptide-methionine (R)-S-oxide reductase MsrB | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.47 | HER17_RS16125 | | HlyD family type I secretion periplasmic adaptor subunit | 0.69 | HER17_RS11125 | | peptide-methionine (R)-S-oxide reductase MsrB | low | > 75 |
| Sphingomonas koreensis DSMZ 15582 | 0.46 | Ga0059261_0542 | | type I secretion membrane fusion protein, HlyD family | 0.47 | Ga0059261_2180 | | methionine-R-sulfoxide reductase | low | > 68 |
| Ralstonia solanacearum GMI1000 | 0.41 | RS_RS22840 | | secretion protein HlyD | 0.52 | RS_RS08825 | | peptide-methionine (R)-S-oxide reductase | low | > 80 |
| Escherichia coli Nissle 1917 | 0.41 | ECOLIN_RS01695 | | HlyD family type I secretion periplasmic adaptor subunit | 0.89 | ECOLIN_RS09915 | | peptide-methionine (R)-S-oxide reductase MsrB | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.37 | AO353_11195 | | hemolysin secretion protein D | 0.52 | AO353_19155 | | peptide methionine sulfoxide reductase | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.36 | Pf1N1B4_1796 | | Type I secretion system, membrane fusion protein LapC | 0.52 | Pf1N1B4_260 | | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) | low | > 87 |
| Pseudomonas sp. RS175 | 0.35 | PFR28_04788 | | Type I secretion system membrane fusion protein PrsE | 0.52 | PFR28_00985 | | Peptide methionine sulfoxide reductase MsrB | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.35 | Pf6N2E2_3978 | | Type I secretion system, membrane fusion protein LapC | 0.52 | Pf6N2E2_2445 | | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.35 | AO356_10555 | | hemolysin secretion protein D | 0.52 | AO356_03085 | | peptide methionine sulfoxide reductase | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.35 | PfGW456L13_533 | | Type I secretion system, membrane fusion protein LapC | 0.53 | PfGW456L13_2253 | | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.34 | OH686_20620 | | Type I secretion membrane fusion protein, HlyD family | 0.51 | OH686_22580 | | Peptide-methionine (R)-S-oxide reductase MsrB | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.33 | Psest_1861 | | type I secretion membrane fusion protein, HlyD family | 0.55 | Psest_1773 | | methionine-R-sulfoxide reductase | low | > 67 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.33 | DVU1018 | rtxD | type I secretion membrane fusion protein, HlyD family (TIGR) | 0.48 | DVU0576 | msrB | peptide methionine sulfoxide reductase MsrB (TIGR) | low | > 55 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.32 | GFF2375 | | Type I secretion system, membrane fusion protein LapC | 0.42 | GFF4579 | | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.30 | Ac3H11_2110 | | Type I secretion system, membrane fusion protein LapC | 0.46 | Ac3H11_2535 | | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) | low | > 79 |
| Shewanella sp. ANA-3 | 0.29 | Shewana3_0380 | | HlyD family type I secretion membrane fusion protein (RefSeq) | 0.43 | Shewana3_4333 | | methionine-R-sulfoxide reductase (RefSeq) | low | > 73 |
| Herbaspirillum seropedicae SmR1 | 0.29 | HSERO_RS15280 | | secretion protein | 0.48 | HSERO_RS11215 | | methionine sulfoxide reductase B | low | > 78 |
| Vibrio cholerae E7946 ATCC 55056 | 0.29 | CSW01_19480 | | HlyD family type I secretion periplasmic adaptor subunit | 0.57 | CSW01_09970 | | peptide-methionine (R)-S-oxide reductase | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.23 | Dshi_2502 | | type I secretion membrane fusion protein, HlyD family (RefSeq) | 0.43 | Dshi_1706 | | methionine-R-sulfoxide reductase (RefSeq) | low | > 64 |
| Azospirillum sp. SherDot2 | 0.21 | MPMX19_04860 | | Type I secretion system membrane fusion protein PrsE | 0.42 | MPMX19_06019 | | Peptide methionine sulfoxide reductase MsrB | low | > 112 |
| Variovorax sp. OAS795 | 0.20 | ABID97_RS24340 | | HlyD family type I secretion periplasmic adaptor subunit | 0.46 | ABID97_RS15695 | | peptide-methionine (R)-S-oxide reductase MsrB | low | > 91 |
| Azospirillum brasilense Sp245 | 0.20 | AZOBR_RS18215 | | hypothetical protein | 0.46 | AZOBR_RS02680 | | methionine sulfoxide reductase B | 0.27 | 83 |
| Rhodanobacter sp. FW510-T8 | 0.17 | OKGIIK_05225 | | Membrane fusion protein (MFP) family protein | 0.41 | OKGIIK_07055 | | Peptide methionine sulfoxide reductase MsrB | low | > 52 |
| Ralstonia solanacearum IBSBF1503 | 0.17 | RALBFv3_RS20765 | | HlyD family type I secretion periplasmic adaptor subunit | 0.52 | RALBFv3_RS01185 | | peptide-methionine (R)-S-oxide reductase | low | > 76 |
| Agrobacterium fabrum C58 | 0.17 | Atu4414 | | bacteriocin ABC transporter permease | 0.48 | Atu0908 | | transcriptional regulator | low | > 89 |
| Pseudomonas syringae pv. syringae B728a | 0.16 | Psyr_0934 | | Type I secretion membrane fusion protein, HlyD | 0.53 | Psyr_3614 | | Protein of unknown function DUF25 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.16 | Psyr_0934 | | Type I secretion membrane fusion protein, HlyD | 0.53 | Psyr_3614 | | Protein of unknown function DUF25 | low | > 86 |
| Pseudomonas simiae WCS417 | 0.16 | PS417_24395 | | hemolysin D | 0.53 | PS417_08565 | | peptide methionine sulfoxide reductase | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.16 | PFLU_RS26325 | | HlyD family type I secretion periplasmic adaptor subunit | 0.53 | PFLU_RS08515 | | peptide-methionine (R)-S-oxide reductase MsrB | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.16 | PFLU_RS26325 | | HlyD family type I secretion periplasmic adaptor subunit | 0.53 | PFLU_RS08515 | | peptide-methionine (R)-S-oxide reductase MsrB | low | > 109 |
| Sinorhizobium meliloti 1021 | 0.16 | SM_b21315 | | HlyD family protein secretion protein | 0.51 | SMc00117 | | hypothetical protein | low | > 103 |
| Ralstonia solanacearum PSI07 | 0.15 | RPSI07_RS01225 | | HlyD family type I secretion periplasmic adaptor subunit | 0.53 | RPSI07_RS16290 | | peptide-methionine (R)-S-oxide reductase | low | > 81 |
| Ralstonia solanacearum UW163 | 0.15 | UW163_RS22520 | | HlyD family type I secretion periplasmic adaptor subunit | 0.52 | UW163_RS14495 | | peptide-methionine (R)-S-oxide reductase | — | — |
| Bosea sp. OAE506 | 0.14 | ABIE41_RS10110 | | HlyD family type I secretion periplasmic adaptor subunit | 0.42 | ABIE41_RS12740 | | peptide-methionine (R)-S-oxide reductase MsrB | low | > 77 |
| Escherichia fergusonii Becca | 0.14 | EFB2_00100 | | Hemolysin secretion protein D, chromosomal | 0.89 | EFB2_02216 | | Peptide methionine sulfoxide reductase MsrB | low | > 86 |
| Serratia liquefaciens MT49 | 0.13 | IAI46_08100 | | HlyD family type I secretion periplasmic adaptor subunit | 0.73 | IAI46_14350 | | peptide-methionine (R)-S-oxide reductase MsrB | low | > 86 |
| Synechococcus elongatus PCC 7942 | 0.11 | Synpcc7942_1904 | hlyD | hemolysin secretion protein-like | 0.54 | Synpcc7942_2190 | msrB | Methionine sulfoxide reductase B | low | > 38 |
| Cupriavidus basilensis FW507-4G11 | 0.08 | RR42_RS12720 | | hemolysin D | 0.50 | RR42_RS11165 | | methionine sulfoxide reductase B | low | > 128 |
| Erwinia tracheiphila SCR3 | 0.07 | LU632_RS23120 | | HlyD family efflux transporter periplasmic adaptor subunit | 0.70 | LU632_RS12990 | msrB | peptide-methionine (R)-S-oxide reductase MsrB | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.07 | ABZR86_RS19535 | | HlyD family efflux transporter periplasmic adaptor subunit | 0.48 | ABZR86_RS11250 | | peptide-methionine (R)-S-oxide reductase MsrB | low | > 74 |
Not shown: 12 genomes with orthologs for GFF4153 only; 22 genomes with orthologs for GFF3479 only