| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_0181 | | glycine cleavage system T protein | 1.0 | Psest_3024 | | cytochrome d oxidase, subunit II (cydB) | 0.33 | 20 |
| Alteromonas macleodii MIT1002 | 0.61 | MIT1002_02973 | | Aminomethyltransferase | 0.56 | MIT1002_03848 | | Cytochrome d ubiquinol oxidase subunit 2 | low | > 70 |
| Serratia liquefaciens MT49 | 0.60 | IAI46_20860 | | glycine cleavage system aminomethyltransferase GcvT | 0.58 | IAI46_06300 | | cytochrome d ubiquinol oxidase subunit II | low | > 86 |
| Escherichia fergusonii Becca | 0.60 | EFB2_00997 | | Aminomethyltransferase | 0.56 | EFB2_03373 | | Cytochrome bd-I ubiquinol oxidase subunit 2 | — | — |
| Escherichia coli BW25113 | 0.60 | b2905 | gcvT | glycine cleavage system aminomethyltransferase T (NCBI) | 0.56 | b0734 | cydB | cytochrome d terminal oxidase, subunit II (NCBI) | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.60 | OHPLBJKB_00810 | | Aminomethyltransferase | 0.56 | OHPLBJKB_02980 | | Cytochrome bd-I ubiquinol oxidase subunit 2 | — | — |
| Escherichia coli ECOR27 | 0.60 | NOLOHH_11435 | gcvT | glycine cleavage system aminomethyltransferase GcvT | 0.56 | NOLOHH_23275 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia coli BL21 | 0.60 | ECD_02737 | | aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex | 0.56 | ECD_00693 | | cytochrome d terminal oxidase, subunit II | — | — |
| Escherichia coli ECRC62 | 0.60 | BNILDI_09970 | gcvT | glycine cleavage system aminomethyltransferase GcvT | 0.56 | BNILDI_21270 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia coli Nissle 1917 | 0.60 | ECOLIN_RS16175 | | glycine cleavage system aminomethyltransferase GcvT | 0.56 | ECOLIN_RS03905 | | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia coli ECRC99 | 0.60 | KEDOAH_08620 | gcvT | glycine cleavage system aminomethyltransferase GcvT | 0.56 | KEDOAH_21125 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia coli ECRC102 | 0.60 | NIAGMN_17285 | gcvT | glycine cleavage system aminomethyltransferase GcvT | 0.56 | NIAGMN_04890 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia coli ECRC98 | 0.60 | JDDGAC_23160 | gcvT | glycine cleavage system aminomethyltransferase GcvT | 0.56 | JDDGAC_10495 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia coli ECOR38 | 0.60 | HEPCGN_18810 | gcvT | glycine cleavage system aminomethyltransferase GcvT | 0.56 | HEPCGN_01430 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia coli ECRC101 | 0.60 | OKFHMN_19520 | gcvT | glycine cleavage system aminomethyltransferase GcvT | 0.56 | OKFHMN_06840 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Escherichia coli ECRC101 | 0.60 | MCAODC_10040 | gcvT | glycine cleavage system aminomethyltransferase GcvT | 0.56 | MCAODC_26060 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Enterobacter asburiae PDN3 | 0.59 | EX28DRAFT_2957 | | glycine cleavage system T protein | 0.55 | EX28DRAFT_2258 | | cytochrome d oxidase, subunit II (cydB) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.59 | HER17_RS18005 | | glycine cleavage system aminomethyltransferase GcvT | 0.56 | HER17_RS14900 | | cytochrome d ubiquinol oxidase subunit II | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.59 | GFF3005 | | Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) | 0.57 | GFF4647 | | Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.59 | MPMX20_03764 | | Aminomethyltransferase | 0.57 | MPMX20_01362 | | Cytochrome bd-I ubiquinol oxidase subunit 2 | low | > 85 |
| Shewanella amazonensis SB2B | 0.59 | Sama_2721 | gcvT | glycine cleavage system aminomethyltransferase T (RefSeq) | 0.56 | Sama_2348 | | cytochrome bd-I oxidase subunit II (RefSeq) | low | > 62 |
| Klebsiella michiganensis M5al | 0.59 | BWI76_RS23880 | | Aminomethyltransferase (EC 2.1.2.10) (from data) | 0.55 | BWI76_RS08500 | | cytochrome d ubiquinol oxidase subunit 2 | low | > 92 |
| Dickeya dianthicola 67-19 | 0.59 | HGI48_RS03390 | | glycine cleavage system aminomethyltransferase GcvT | 0.56 | HGI48_RS06525 | | cytochrome d ubiquinol oxidase subunit II | — | — |
| Pantoea sp. MT58 | 0.59 | IAI47_03765 | | glycine cleavage system aminomethyltransferase GcvT | 0.55 | IAI47_13720 | | cytochrome d ubiquinol oxidase subunit II | low | > 76 |
| Rahnella sp. WP5 | 0.59 | EX31_RS21510 | | glycine cleavage system aminomethyltransferase GcvT | 0.58 | EX31_RS23465 | | cytochrome d ubiquinol oxidase subunit II | low | > 89 |
| Dickeya dadantii 3937 | 0.59 | DDA3937_RS03245 | | glycine cleavage system aminomethyltransferase GcvT | 0.57 | DDA3937_RS06485 | | cytochrome d ubiquinol oxidase subunit II | — | — |
| Shewanella oneidensis MR-1 | 0.59 | SO0779 | gcvT | glycine cleavage system T protein (NCBI ptt file) | 0.60 | SO3285 | cydB | cytochrome d ubiquinol oxidase, subunit II (NCBI ptt file) | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.58 | LU632_RS05905 | gcvT | glycine cleavage system aminomethyltransferase GcvT | 0.57 | LU632_RS16060 | cydB | cytochrome d ubiquinol oxidase subunit II | — | — |
| Dickeya dianthicola ME23 | 0.58 | DZA65_RS03435 | | glycine cleavage system aminomethyltransferase GcvT | 0.56 | DZA65_RS06875 | | cytochrome d ubiquinol oxidase subunit II | — | — |
| Shewanella sp. ANA-3 | 0.58 | Shewana3_3501 | gcvT | glycine cleavage system aminomethyltransferase T (RefSeq) | 0.61 | Shewana3_1242 | | cytochrome d ubiquinol oxidase, subunit II (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.58 | Shew_3064 | gcvT | glycine cleavage system aminomethyltransferase T (RefSeq) | 0.59 | Shew_1303 | | cytochrome d ubiquinol oxidase, subunit II (RefSeq) | — | — |
| Rhodanobacter denitrificans MT42 | 0.55 | LRK55_RS05280 | | glycine cleavage system aminomethyltransferase GcvT | 0.44 | LRK55_RS11430 | | cytochrome d ubiquinol oxidase subunit II | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.55 | LRK54_RS05510 | | glycine cleavage system aminomethyltransferase GcvT | 0.44 | LRK54_RS11705 | | cytochrome d ubiquinol oxidase subunit II | low | > 59 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.55 | Xcc-8004.1567.1 | | Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) | 0.46 | Xcc-8004.2332.1 | | Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.55 | ABZR86_RS18875 | | glycine cleavage system aminomethyltransferase GcvT | 0.44 | ABZR86_RS11960 | | cytochrome d ubiquinol oxidase subunit II | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.55 | OKGIIK_01305 | gcvT | glycine cleavage system aminomethyltransferase GcvT | 0.42 | OKGIIK_12190 | cydB | cytochrome d ubiquinol oxidase subunit II | low | > 52 |
| Dechlorosoma suillum PS | 0.53 | Dsui_2735 | | glycine cleavage system T protein | 0.54 | Dsui_1916 | | cytochrome d oxidase cyd, subunit II | low | > 51 |
| Castellaniella sp019104865 MT123 | 0.53 | ABCV34_RS08845 | | glycine cleavage system aminomethyltransferase GcvT | 0.46 | ABCV34_RS14395 | | cytochrome d ubiquinol oxidase subunit II | low | > 48 |
| Paraburkholderia sabiae LMG 24235 | 0.48 | QEN71_RS29205 | | glycine cleavage system aminomethyltransferase GcvT | 0.58 | QEN71_RS01610 | | cytochrome d ubiquinol oxidase subunit II | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.47 | BPHYT_RS19320 | | glycine cleavage system protein T | 0.58 | BPHYT_RS02760 | | cytochrome BD oxidase subunit II | low | > 109 |
| Bacteroides ovatus ATCC 8483 | 0.31 | BACOVA_05378 | | aminomethyltransferase | 0.14 | BACOVA_03969 | | cytochrome d ubiquinol oxidase, subunit II | low | > 94 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.30 | BT4584 | | putative aminomethyltransferase (NCBI ptt file) | 0.12 | BT1209 | | cytochrome D ubiquinol oxidase subunit II (NCBI ptt file) | low | > 81 |
| Phocaeicola vulgatus CL09T03C04 | 0.30 | HMPREF1058_RS04685 | | glycine cleavage system aminomethyltransferase GcvT | 0.15 | HMPREF1058_RS18040 | | cytochrome d ubiquinol oxidase subunit II | 0.82 | 40 |
| Phocaeicola dorei CL03T12C01 | 0.30 | ABI39_RS18950 | | glycine cleavage system aminomethyltransferase GcvT | 0.14 | ABI39_RS14365 | | cytochrome d ubiquinol oxidase subunit II | low | > 72 |
| Bacteroides stercoris CC31F | 0.29 | HMPREF1181_RS13255 | | glycine cleavage system aminomethyltransferase GcvT | 0.14 | HMPREF1181_RS12455 | | cytochrome d ubiquinol oxidase subunit II | low | > 56 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.29 | ABZR88_RS21210 | | glycine cleavage system aminomethyltransferase GcvT | 0.23 | ABZR88_RS22225 | | cytochrome d ubiquinol oxidase subunit II | — | — |
| Parabacteroides merdae CL09T00C40 | 0.28 | HMPREF1078_RS10420 | | glycine cleavage system aminomethyltransferase GcvT | 0.10 | HMPREF1078_RS04495 | | cytochrome d ubiquinol oxidase subunit II | low | > 61 |
| Mycobacterium tuberculosis H37Rv | 0.28 | Rv2211c | | Probable aminomethyltransferase GcvT (glycine cleavage system T protein) | 0.22 | Rv1622c | | Probable integral membrane cytochrome D ubiquinol oxidase (subunit II) CydB (cytochrome BD-I oxidase subunit II) | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.28 | CCNA_03465 | | glycine cleavage system aminomethyltransferase T | 0.51 | CCNA_00801 | | cytochrome bd-type quinol oxidase, subunit 2 cydB | low | > 67 |
| Caulobacter crescentus NA1000 | 0.28 | CCNA_03465 | | glycine cleavage system aminomethyltransferase T | 0.51 | CCNA_00801 | | cytochrome bd-type quinol oxidase, subunit 2 cydB | low | > 66 |
| Rhizobium sp. OAE497 | 0.26 | ABIE40_RS09940 | | glycine cleavage system aminomethyltransferase GcvT | 0.51 | ABIE40_RS20495 | | cytochrome d ubiquinol oxidase subunit II | low | > 107 |
| Sphingomonas koreensis DSMZ 15582 | 0.24 | Ga0059261_3256 | | glycine cleavage system T protein | 0.51 | Ga0059261_3823 | | cytochrome d oxidase, subunit II (cydB) | low | > 68 |
| Agrobacterium fabrum C58 | 0.24 | Atu1464 | | glycine cleavage system T protein, aminomethyltransferase | 0.50 | Atu4092 | | cytochrome d oxidase subunit II | low | > 89 |
| Variovorax sp. SCN45 | 0.23 | GFF6476 | | Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) | 0.48 | GFF2652 | | Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) | low | > 127 |
| Vibrio cholerae E7946 ATCC 55056 | 0.22 | CSW01_15350 | | glycine cleavage system aminomethyltransferase T | 0.58 | CSW01_09230 | | cytochrome d ubiquinol oxidase subunit II | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.22 | DvMF_0341 | | glycine cleavage system T protein (RefSeq) | 0.26 | DvMF_2472 | | cytochrome d ubiquinol oxidase, subunit II (RefSeq) | low | > 51 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.22 | DVU1684 | gcvT | glycine cleavage system T protein (TIGR) | 0.29 | DVU3270 | cydB | cytochrome d ubiquinol oxidase, subunit II (TIGR) | low | > 55 |
Not shown: 38 genomes with orthologs for Psest_0181 only; 2 genomes with orthologs for Psest_3024 only