Conservation of cofitness between GFF339 and GFF2574 in Variovorax sp. SCN45

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF339 Exodeoxyribonuclease I (EC 3.1.11.1) 1.0 GFF2574 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.52 16
Variovorax sp. OAS795 0.94 ABID97_RS16900 exodeoxyribonuclease I 0.86 ABID97_RS07410 carboxylating nicotinate-nucleotide diphosphorylase low > 91
Acidovorax sp. GW101-3H11 0.78 Ac3H11_2454 Exodeoxyribonuclease I (EC 3.1.11.1) 0.67 Ac3H11_3838 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) low > 79
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS03495 exodeoxyribonuclease I 0.55 ABZR87_RS00350 carboxylating nicotinate-nucleotide diphosphorylase low > 80
Ralstonia solanacearum IBSBF1503 0.66 RALBFv3_RS07800 exodeoxyribonuclease I 0.57 RALBFv3_RS04730 nicotinate-nucleotide diphosphorylase (carboxylating) low > 76
Ralstonia solanacearum UW163 0.66 UW163_RS05825 exodeoxyribonuclease I 0.57 UW163_RS08940 nicotinate-nucleotide diphosphorylase (carboxylating) — —
Ralstonia solanacearum PSI07 0.66 RPSI07_RS09480 exodeoxyribonuclease I 0.57 RPSI07_RS12655 nicotinate-nucleotide diphosphorylase (carboxylating) — —
Ralstonia solanacearum GMI1000 0.65 RS_RS15700 exodeoxyribonuclease I 0.54 RS_RS12290 nicotinate-nucleotide diphosphorylase (carboxylating) low > 80
Marinobacter adhaerens HP15 0.51 HP15_2375 exonuclease I 0.46 HP15_1305 nicotinate-nucleotide pyrophosphorylase — —
Shewanella amazonensis SB2B 0.46 Sama_1973 sbcB exonuclease I (RefSeq) 0.46 Sama_0371 nicotinate-nucleotide diphosphorylase (carboxylating) (RefSeq) — —
Dickeya dadantii 3937 0.45 DDA3937_RS09820 exodeoxyribonuclease I 0.41 DDA3937_RS17955 carboxylating nicotinate-nucleotide diphosphorylase low > 74
Dickeya dianthicola 67-19 0.44 HGI48_RS09830 exodeoxyribonuclease I 0.41 HGI48_RS17890 carboxylating nicotinate-nucleotide diphosphorylase — —
Dickeya dianthicola ME23 0.44 DZA65_RS10155 exodeoxyribonuclease I 0.41 DZA65_RS19035 carboxylating nicotinate-nucleotide diphosphorylase low > 75
Shewanella loihica PV-4 0.44 Shew_1611 sbcB exonuclease I (RefSeq) 0.48 Shew_3435 nicotinate-nucleotide pyrophosphorylase (RefSeq) — —
Pantoea sp. MT58 0.44 IAI47_07165 exodeoxyribonuclease I 0.40 IAI47_15845 carboxylating nicotinate-nucleotide diphosphorylase low > 76
Shewanella sp. ANA-3 0.44 Shewana3_2572 sbcB exonuclease I (RefSeq) 0.42 Shewana3_0422 nicotinate-nucleotide pyrophosphorylase [carboxylating] (RefSeq) — —
Serratia liquefaciens MT49 0.43 IAI46_17150 exodeoxyribonuclease I 0.40 IAI46_03530 carboxylating nicotinate-nucleotide diphosphorylase low > 86
Rahnella sp. WP5 0.43 EX31_RS17885 exodeoxyribonuclease I 0.43 EX31_RS03515 carboxylating nicotinate-nucleotide diphosphorylase low > 89
Pseudomonas sp. S08-1 0.43 OH686_18285 Exodeoxyribonuclease I 0.48 OH686_16520 nicotinate-nucleotide diphosphorylase (carboxylating) low > 80
Pseudomonas simiae WCS417 0.43 PS417_22575 exonuclease I 0.51 PS417_03925 nicotinate-nucleotide pyrophosphorylase low > 88
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_1823 Exodeoxyribonuclease I (EC 3.1.11.1) 0.49 PfGW456L13_5082 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) low > 87
Pectobacterium carotovorum WPP14 0.43 HER17_RS12135 exodeoxyribonuclease I 0.45 HER17_RS03250 carboxylating nicotinate-nucleotide diphosphorylase low > 75
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS24210 exodeoxyribonuclease I 0.51 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS24210 exodeoxyribonuclease I 0.51 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase low > 109
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_668 Exodeoxyribonuclease I (EC 3.1.11.1) 0.51 Pf1N1B4_1153 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) low > 87
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_03720 exonuclease I 0.51 AO353_05520 nicotinate-nucleotide pyrophosphorylase low > 101
Erwinia tracheiphila SCR3 0.42 LU632_RS15835 sbcB exodeoxyribonuclease I 0.40 LU632_RS03040 nadC carboxylating nicotinate-nucleotide diphosphorylase low > 74
Pseudomonas putida KT2440 0.42 PP_1365 exodeoxyribonuclease I 0.48 PP_0787 quinolinate phosphoribosyltransferase (decarboxylating) monomer — —
Pseudomonas stutzeri RCH2 0.41 Psest_3180 Exonuclease I 0.50 Psest_0718 nicotinate-nucleotide pyrophosphorylase low > 67
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_01689 Exodeoxyribonuclease I 0.40 OHPLBJKB_03552 Nicotinate-nucleotide pyrophosphorylase [carboxylating] low > 73
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS01905 exodeoxyribonuclease I 0.49 ABZR86_RS09850 carboxylating nicotinate-nucleotide diphosphorylase low > 74
Escherichia coli ECOR38 0.41 HEPCGN_03270 sbcB exodeoxyribonuclease I 0.40 HEPCGN_08510 nadC carboxylating nicotinate-nucleotide diphosphorylase low > 87
Escherichia coli Nissle 1917 0.41 ECOLIN_RS11910 exodeoxyribonuclease I 0.40 ECOLIN_RS00585 carboxylating nicotinate-nucleotide diphosphorylase low > 55
Escherichia coli BW25113 0.41 b2011 sbcB exonuclease I (NCBI) 0.40 b0109 nadC nicotinate-nucleotide pyrophosphorylase (NCBI) low > 76
Escherichia fergusonii Becca 0.41 EFB2_01845 Exodeoxyribonuclease I 0.40 EFB2_03940 Nicotinate-nucleotide pyrophosphorylase [carboxylating] low > 86
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0545 Exodeoxyribonuclease I subunit C (EC 3.1.11.1) 0.40 EX28DRAFT_3702 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) low > 76
Escherichia coli ECRC98 0.41 JDDGAC_28675 sbcB exodeoxyribonuclease I 0.40 JDDGAC_14125 nadC carboxylating nicotinate-nucleotide diphosphorylase low > 86
Escherichia coli ECRC99 0.41 KEDOAH_03585 sbcB exodeoxyribonuclease I 0.40 KEDOAH_17625 nadC carboxylating nicotinate-nucleotide diphosphorylase — —
Escherichia coli ECRC62 0.41 BNILDI_14790 sbcB exodeoxyribonuclease I 0.40 BNILDI_08735 nadC carboxylating nicotinate-nucleotide diphosphorylase low > 75
Escherichia coli ECOR27 0.41 NOLOHH_15890 sbcB exodeoxyribonuclease I 0.40 NOLOHH_02875 nadC carboxylating nicotinate-nucleotide diphosphorylase low > 75
Escherichia coli ECRC102 0.41 NIAGMN_22510 sbcB exodeoxyribonuclease I 0.40 NIAGMN_08380 nadC carboxylating nicotinate-nucleotide diphosphorylase — —
Escherichia coli ECRC100 0.41 OKFHMN_24565 sbcB exodeoxyribonuclease I 0.40 OKFHMN_10530 nadC carboxylating nicotinate-nucleotide diphosphorylase low > 80
Escherichia coli ECRC101 0.41 MCAODC_20375 sbcB exodeoxyribonuclease I 0.40 MCAODC_01045 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.62 59
Pseudomonas sp. RS175 0.41 PFR28_03441 Exodeoxyribonuclease I 0.51 PFR28_00098 Nicotinate-nucleotide pyrophosphorylase [carboxylating] low > 88
Escherichia coli BL21 0.41 ECD_01914 exodeoxyribonuclease I; exonuclease I 0.40 ECD_00108 quinolinate phosphoribosyltransferase low > 61
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_5506 Exodeoxyribonuclease I (EC 3.1.11.1) 0.50 Pf6N2E2_3346 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) low > 103
Enterobacter sp. TBS_079 0.41 MPMX20_02997 Exodeoxyribonuclease I 0.41 MPMX20_00800 Nicotinate-nucleotide pyrophosphorylase [carboxylating] low > 85
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_17885 exonuclease I 0.50 AO356_07370 nicotinate-nucleotide pyrophosphorylase low > 104
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS17465 exodeoxyribonuclease I 0.47 LRK54_RS13795 carboxylating nicotinate-nucleotide diphosphorylase low > 59
Rhodanobacter denitrificans MT42 0.41 LRK55_RS17685 exodeoxyribonuclease I 0.47 LRK55_RS13510 carboxylating nicotinate-nucleotide diphosphorylase low > 63
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF3917 Exodeoxyribonuclease I (EC 3.1.11.1) 0.41 GFF130 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) low > 78
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_06240 exodeoxyribonuclease I 0.43 CSW01_12265 carboxylating nicotinate-nucleotide diphosphorylase low > 62
Alteromonas macleodii MIT1002 0.41 MIT1002_01676 Exodeoxyribonuclease I 0.43 MIT1002_03008 Nicotinate-nucleotide pyrophosphorylase [carboxylating] — —
Klebsiella michiganensis M5al 0.41 BWI76_RS18785 exodeoxyribonuclease I 0.39 BWI76_RS04845 nicotinate-nucleotide pyrophosphorylase low > 92
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_4020 Exodeoxyribonuclease I subunit C 0.51 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) low > 86
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_4020 Exodeoxyribonuclease I subunit C 0.51 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) low > 86
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.3329.1 Exodeoxyribonuclease I (EC 3.1.11.1) 0.44 Xcc-8004.2009.1 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) low > 74
Lysobacter sp. OAE881 0.37 ABIE51_RS12700 exodeoxyribonuclease I 0.46 ABIE51_RS15405 carboxylating nicotinate-nucleotide diphosphorylase low > 62
Bosea sp. OAE506 0.15 ABIE41_RS00465 exonuclease domain-containing protein 0.37 ABIE41_RS02500 carboxylating nicotinate-nucleotide diphosphorylase low > 77

Not shown: 2 genomes with orthologs for GFF339 only; 41 genomes with orthologs for GFF2574 only