Conservation of cofitness between GFF2754 and GFF2221 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2754 UPF0028 protein YchK 1.0 GFF2221 Nitrogen regulation protein NtrB (EC 2.7.13.3) 0.91 10
Escherichia coli ECRC100 0.87 OKFHMN_28580 rssA patatin-like phospholipase RssA 0.94 OKFHMN_14105 glnL nitrogen regulation protein NR(II) low > 80
Escherichia coli ECOR38 0.87 HEPCGN_25040 rssA patatin-like phospholipase RssA 0.93 HEPCGN_12735 glnL nitrogen regulation protein NR(II) low > 87
Escherichia coli ECRC98 0.87 JDDGAC_05995 rssA patatin-like phospholipase RssA 0.94 JDDGAC_17730 glnL nitrogen regulation protein NR(II) low > 86
Escherichia coli ECRC99 0.87 KEDOAH_25575 rssA patatin-like phospholipase RssA 0.94 KEDOAH_14045 glnL nitrogen regulation protein NR(II)
Escherichia coli ECOR27 0.87 NOLOHH_20470 rssA patatin-like phospholipase RssA 0.93 NOLOHH_06235 glnL nitrogen regulation protein NR(II) low > 75
Escherichia coli ECRC101 0.87 MCAODC_21680 rssA patatin-like phospholipase RssA 0.94 MCAODC_04605 glnL nitrogen regulation protein NR(II) low > 87
Escherichia fergusonii Becca 0.87 EFB2_02692 putative NTE family protein 0.93 EFB2_04747 Sensory histidine kinase/phosphatase NtrB low > 86
Escherichia coli ECRC102 0.87 NIAGMN_27655 rssA patatin-like phospholipase RssA 0.94 NIAGMN_11860 glnL nitrogen regulation protein NR(II)
Escherichia coli ECRC62 0.86 BNILDI_18625 rssA patatin-like phospholipase RssA 0.94 BNILDI_05295 glnL nitrogen regulation protein NR(II) low > 75
Escherichia coli Nissle 1917 0.86 ECOLIN_RS07470 patatin-like phospholipase RssA 0.93 ECOLIN_RS22300 nitrogen regulation protein NR(II) low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.86 OHPLBJKB_02451 putative NTE family protein 0.94 OHPLBJKB_04183 Sensory histidine kinase/phosphatase NtrB low > 73
Escherichia coli BL21 0.86 ECD_01210 putative patatin-like family phospholipase 0.94 ECD_03754 sensory histidine kinase in two-component regulatory system with GlnG low > 61
Escherichia coli BW25113 0.86 b1234 rssA conserved protein (RefSeq) 0.94 b3869 glnL sensory histidine kinase in two-component regulatory system with GlnG (NCBI) low > 76
Klebsiella michiganensis M5al 0.81 BWI76_RS17280 patatin family protein 0.94 BWI76_RS00390 two-component system sensor histidine kinase NtrB low > 92
Enterobacter sp. TBS_079 0.80 MPMX20_02594 putative NTE family protein 0.92 MPMX20_04596 Sensory histidine kinase/phosphatase NtrB low > 85
Enterobacter asburiae PDN3 0.79 EX28DRAFT_0860 Predicted esterase of the alpha-beta hydrolase superfamily 0.92 EX28DRAFT_4351 Signal transduction histidine kinase, nitrogen specific low > 76
Pantoea sp. MT58 0.73 IAI47_09020 patatin-like phospholipase RssA 0.88 IAI47_00455 nitrogen regulation protein NR(II) low > 76
Rahnella sp. WP5 0.73 EX31_RS10105 patatin-like phospholipase RssA 0.87 EX31_RS15875 nitrogen regulation protein NR(II) low > 89
Serratia liquefaciens MT49 0.71 IAI46_14255 patatin-like phospholipase RssA 0.88 IAI46_24955 nitrogen regulation protein NR(II) low > 86
Dickeya dadantii 3937 0.67 DDA3937_RS10335 patatin-like phospholipase RssA 0.84 DDA3937_RS00130 nitrogen regulation protein NR(II) low > 74
Dickeya dianthicola ME23 0.67 DZA65_RS10820 patatin-like phospholipase RssA 0.84 DZA65_RS22205 nitrogen regulation protein NR(II) low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS10345 patatin-like phospholipase RssA 0.84 HGI48_RS21230 nitrogen regulation protein NR(II) low > 71
Pectobacterium carotovorum WPP14 0.65 HER17_RS11055 patatin-like phospholipase RssA 0.84 HER17_RS21435 nitrogen regulation protein NR(II) low > 75
Shewanella amazonensis SB2B 0.42 Sama_1274 hypothetical protein (RefSeq) 0.46 Sama_3426 nitrogen regulation protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.41 MIT1002_02140 NTE family protein RssA 0.43 MIT1002_03185 Nitrogen regulation protein NR(II) low > 70
Shewanella loihica PV-4 0.41 Shew_2451 patatin (RefSeq) 0.46 Shew_3560 signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) low > 60
Shewanella sp. ANA-3 0.40 Shewana3_2605 patatin (RefSeq) 0.48 Shewana3_0259 signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) low > 73
Dechlorosoma suillum PS 0.40 Dsui_2541 putative esterase of the alpha-beta hydrolase superfamily 0.38 Dsui_1050 signal transduction histidine kinase, nitrogen specific low > 51
Shewanella oneidensis MR-1 0.40 SO2836 conserved hypothetical protein (NCBI ptt file) 0.47 SO4471 ntrB nitrogen regulation protein (NCBI ptt file) low > 76
Azospirillum brasilense Sp245 0.37 AZOBR_RS09645 patatin 0.23 AZOBR_RS14425 ATPase low > 97
Azospirillum sp. SherDot2 0.34 MPMX19_00849 hypothetical protein 0.24 MPMX19_01111 Sensory histidine kinase/phosphatase NtrB low > 112
Bosea sp. OAE506 0.33 ABIE41_RS14040 patatin-like phospholipase family protein 0.22 ABIE41_RS16790 ATP-binding protein low > 77
Rhodopseudomonas palustris CGA009 0.32 TX73_017640 patatin-like phospholipase family protein 0.22 TX73_013415 nitrogen regulation protein NR(II) 0.26 66
Paraburkholderia graminis OAS925 0.32 ABIE53_001764 NTE family protein 0.33 ABIE53_002805 two-component system nitrogen regulation sensor histidine kinase GlnL low > 113
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS07670 patatin 0.32 BPHYT_RS12940 signal transduction histidine kinase
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_06473 NTE family protein 0.32 H281DRAFT_00453 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL low > 103
Rhizobium sp. OAE497 0.31 ABIE40_RS09730 patatin-like phospholipase family protein 0.22 ABIE40_RS09085 nitrogen regulation protein NR(II) low > 107
Paraburkholderia sabiae LMG 24235 0.30 QEN71_RS23405 patatin-like phospholipase family protein 0.32 QEN71_RS05670 nitrogen regulation protein NR(II) low > 153
Agrobacterium fabrum C58 0.30 Atu1751 hypothetical protein 0.22 Atu1445 two component sensor kinase low > 89
Sinorhizobium meliloti 1021 0.29 SMc01003 hypothetical protein 0.22 SMc01042 nitrogen regulation protein low > 103
Pseudomonas simiae WCS417 0.28 PS417_08310 alpha/beta hydrolase 0.42 PS417_01640 histidine kinase low > 88
Pseudomonas sp. S08-1 0.28 OH686_01880 Bacterial patatin-like phospholipase domain containing protein 0.42 OH686_10635 Nitrogen regulation protein NtrB low > 80
Pseudomonas fluorescens SBW25 0.28 PFLU_RS08250 alpha/beta hydrolase 0.42 PFLU_RS01690 nitrogen regulation protein NR(II) low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS08250 alpha/beta hydrolase 0.42 PFLU_RS01690 nitrogen regulation protein NR(II) low > 109
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_310 UPF0028 protein YchK 0.42 Pf1N1B4_1610 Nitrogen regulation protein NtrB (EC 2.7.13.3) low > 87
Pseudomonas stutzeri RCH2 0.27 Psest_2463 Predicted esterase of the alpha-beta hydrolase superfamily 0.40 Psest_3931 Signal transduction histidine kinase, nitrogen specific low > 67
Pseudomonas putida KT2440 0.27 PP_2305 conserved protein of unknown function 0.43 PP_5047 two-component system sensory histidine kinase/phosphatase GlnL/GlnG low > 96
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_2489 UPF0028 protein YchK 0.42 Pf6N2E2_3825 Nitrogen regulation protein NtrB (EC 2.7.13.3) low > 103
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_03290 alpha/beta hydrolase 0.42 AO356_09725 histidine kinase low > 104
Marinobacter adhaerens HP15 0.27 HP15_1840 patatin 0.40 HP15_426 signal transduction histidine kinase, nitrogen specific, NtrB low > 73
Rhodanobacter denitrificans MT42 0.26 LRK55_RS08480 patatin-like phospholipase family protein 0.21 LRK55_RS07735 ATP-binding protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS08715 patatin-like phospholipase family protein 0.22 LRK54_RS07985 ATP-binding protein low > 59
Rhodanobacter sp. FW510-T8 0.26 OKGIIK_15480 Serine protease 0.24 OKGIIK_14470 PAS domain-containing sensor histidine kinase low > 52
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_2206 UPF0028 protein YchK 0.42 PfGW456L13_346 Nitrogen regulation protein NtrB (EC 2.7.13.3) low > 87
Pseudomonas sp. RS175 0.26 PFR28_00944 putative NTE family protein 0.42 PFR28_04945 Sensory histidine kinase/phosphatase NtrB low > 88
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_18940 alpha/beta hydrolase 0.41 AO353_12150 histidine kinase low > 101
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS14850 patatin-like phospholipase family protein 0.25 ABZR86_RS15510 ATP-binding protein low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF3828 UPF0028 protein YchK 0.33 GFF5270 Nitrogen regulation protein NtrB (EC 2.7.13.3) low > 90

Not shown: 4 genomes with orthologs for GFF2754 only; 21 genomes with orthologs for GFF2221 only