Conservation of cofitness between PGA1_c35050 and PGA1_c01940 in Phaeobacter inhibens DSM 17395

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c35050 oxygen-independent coproporphyrinogen III oxidase HemN 1.0 PGA1_c01940 crcB-like protein 0.27 10
Dinoroseobacter shibae DFL-12 0.64 Dshi_3460 putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) 0.60 Dshi_0314 Camphor resistance CrcB protein (RefSeq) — —
Azospirillum brasilense Sp245 0.51 AZOBR_RS02195 coproporphyrinogen III oxidase 0.29 AZOBR_RS06900 camphor resistance protein CrcB low > 97
Agrobacterium fabrum C58 0.50 Atu0325 oxygen-independent coproporphyrinogen III oxidase 0.40 Atu1470 Camphor resistance protein — —
Sinorhizobium meliloti 1021 0.49 SMc01147 coproporphyrinogen III oxidase 0.32 SMc01274 camphor resistance protein CrcB low > 103
Rhizobium sp. OAE497 0.49 ABIE40_RS01625 radical SAM family heme chaperone HemW 0.33 ABIE40_RS09920 fluoride efflux transporter CrcB — —
Rhodopseudomonas palustris CGA009 0.49 TX73_001700 radical SAM family heme chaperone HemW 0.33 TX73_008715 fluoride efflux transporter CrcB — —
Bosea sp. OAE506 0.48 ABIE41_RS03305 radical SAM family heme chaperone HemW 0.31 ABIE41_RS14705 fluoride efflux transporter CrcB low > 77
Azospirillum sp. SherDot2 0.48 MPMX19_02574 Heme chaperone HemW 0.32 MPMX19_01719 Putative fluoride ion transporter CrcB low > 112
Magnetospirillum magneticum AMB-1 0.45 AMB_RS22770 radical SAM protein 0.27 AMB_RS17225 fluoride efflux transporter CrcB — —
Sphingomonas koreensis DSMZ 15582 0.43 Ga0059261_2753 putative oxygen-independent coproporphyrinogen III oxidase 0.28 Ga0059261_1032 protein CrcB low > 68
Rhodospirillum rubrum S1H 0.42 Rru_A3639 Putative oxygen-independent coproporphyrinogen III oxidase (NCBI) 0.27 Rru_A0236 Camphor resistance CrcB protein (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS12445 radical SAM family heme chaperone HemW 0.35 A4249_RS07870 fluoride efflux transporter CrcB low > 48
Caulobacter crescentus NA1000 0.39 CCNA_00144 oxygen-independent coproporphyrinogen-III oxidase 0.43 CCNA_02060 CrcB family protein low > 66
Caulobacter crescentus NA1000 Δfur 0.39 CCNA_00144 oxygen-independent coproporphyrinogen-III oxidase 0.43 CCNA_02060 CrcB family protein low > 67
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS03635 radical SAM family heme chaperone HemW 0.25 QEN71_RS23260 fluoride efflux transporter CrcB low > 153
Paraburkholderia graminis OAS925 0.33 ABIE53_003236 putative oxygen-independent coproporphyrinogen III oxidase 0.26 ABIE53_001795 CrcB protein low > 113
Lysobacter sp. OAE881 0.33 ABIE51_RS17300 radical SAM family heme chaperone HemW 0.23 ABIE51_RS00900 fluoride efflux transporter CrcB low > 62
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS15335 coproporphyrinogen III oxidase 0.25 BPHYT_RS07905 camphor resistance protein CrcB — —
Pseudomonas sp. RS175 0.31 PFR28_04249 Heme chaperone HemW 0.21 PFR28_02605 Putative fluoride ion transporter CrcB low > 88
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS11910 radical SAM family heme chaperone HemW 0.25 ABZR86_RS21375 fluoride efflux transporter CrcB low > 74
Shewanella oneidensis MR-1 0.30 SO3359 oxygen-independent coproporphyrinogen III oxidase, putative (NCBI ptt file) 0.33 SO2309 crcB crcB protein (NCBI ptt file) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF3256 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.22 GFF5356 Protein crcB homolog low > 90
Shewanella sp. ANA-3 0.30 Shewana3_1188 putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) 0.33 Shewana3_2053 camphor resistance protein CrcB (RefSeq) — —
Alteromonas macleodii MIT1002 0.29 MIT1002_00939 Oxygen-independent coproporphyrinogen-III oxidase 1 0.28 MIT1002_02177 camphor resistance protein CrcB low > 70
Klebsiella michiganensis M5al 0.29 BWI76_RS24120 YggW family oxidoreductase 0.21 BWI76_RS07985 fluoride ion transporter CrcB low > 92
Variovorax sp. SCN45 0.29 GFF2383 Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW 0.21 GFF6174 Fluoride ion transporter CrcB low > 127
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_02425 YggW family oxidoreductase 0.33 CSW01_00330 fluoride efflux transporter CrcB low > 62
Dickeya dadantii 3937 0.29 DDA3937_RS17325 radical SAM family heme chaperone HemW 0.21 DDA3937_RS06125 fluoride efflux transporter CrcB low > 74
Serratia liquefaciens MT49 0.28 IAI46_21435 radical SAM family heme chaperone HemW 0.25 IAI46_05885 fluoride efflux transporter CrcB low > 86
Pectobacterium carotovorum WPP14 0.28 HER17_RS03785 radical SAM family heme chaperone HemW 0.23 HER17_RS15285 fluoride efflux transporter CrcB low > 75
Enterobacter sp. TBS_079 0.28 MPMX20_03813 Heme chaperone HemW 0.21 MPMX20_01284 Putative fluoride ion transporter CrcB low > 85
Erwinia tracheiphila SCR3 0.28 LU632_RS05445 hemW radical SAM family heme chaperone HemW 0.26 LU632_RS01320 crcB fluoride efflux transporter CrcB low > 74
Rahnella sp. WP5 0.28 EX31_RS02710 radical SAM family heme chaperone HemW 0.24 EX31_RS23045 fluoride efflux transporter CrcB low > 89
Enterobacter asburiae PDN3 0.28 EX28DRAFT_2993 putative oxygen-independent coproporphyrinogen III oxidase 0.22 EX28DRAFT_2338 protein CrcB low > 76
Shewanella loihica PV-4 0.28 Shew_1131 putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) 0.30 Shew_2021 CrcB protein (RefSeq) — —
Escherichia coli BL21 0.28 ECD_02785 HemN family putative oxidoreductase 0.22 ECD_00594 fluoride efflux channel, dual topology membrane protein low > 60
Shewanella amazonensis SB2B 0.28 Sama_2483 oxygen-independent coproporphyrinogen III oxidase, putative (RefSeq) 0.33 Sama_1775 crcB protein (RefSeq) low > 62
Escherichia coli Nissle 1917 0.28 ECOLIN_RS16435 radical SAM family heme chaperone HemW 0.22 ECOLIN_RS03405 fluoride efflux transporter CrcB — —
Escherichia coli ECOR38 0.28 HEPCGN_18540 hemW radical SAM family heme chaperone HemW 0.21 HEPCGN_00860 crcB fluoride efflux transporter CrcB low > 85
Pseudomonas sp. S08-1 0.28 OH686_11020 Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW 0.23 OH686_00275 Fluoride ion transporter CrcB low > 80
Escherichia fergusonii Becca 0.28 EFB2_00947 Heme chaperone HemW 0.22 EFB2_03467 Putative fluoride ion transporter CrcB low > 86
Escherichia coli ECRC98 0.28 JDDGAC_22865 hemW radical SAM family heme chaperone HemW 0.22 JDDGAC_11060 crcB fluoride efflux transporter CrcB — —
Escherichia coli BW25113 0.28 b2955 yggW coproporphyrinogen III oxidase (NCBI) 0.22 b0624 crcB camphor resistance protein CrcB (NCBI) low > 76
Escherichia coli ECRC101 0.28 MCAODC_09755 hemW radical SAM family heme chaperone HemW 0.22 MCAODC_26630 crcB fluoride efflux transporter CrcB — —
Escherichia coli ECRC102 0.28 NIAGMN_17000 hemW radical SAM family heme chaperone HemW 0.22 NIAGMN_05470 crcB fluoride efflux transporter CrcB — —
Escherichia coli ECRC101 0.28 OKFHMN_19235 hemW radical SAM family heme chaperone HemW 0.22 OKFHMN_07415 crcB fluoride efflux transporter CrcB — —
Escherichia coli ECRC99 0.28 KEDOAH_08905 hemW radical SAM family heme chaperone HemW 0.22 KEDOAH_20555 crcB fluoride efflux transporter CrcB — —
Acidovorax sp. GW101-3H11 0.27 Ac3H11_3672 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.22 Ac3H11_2593 Protein crcB homolog low > 79
Escherichia coli ECRC62 0.27 BNILDI_09685 hemW radical SAM family heme chaperone HemW 0.22 BNILDI_21800 crcB fluoride efflux transporter CrcB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_00761 Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR 0.22 OHPLBJKB_03081 Putative fluoride ion transporter CrcB low > 73
Escherichia coli ECOR27 0.27 NOLOHH_11105 hemW radical SAM family heme chaperone HemW 0.22 NOLOHH_23790 crcB fluoride efflux transporter CrcB — —
Marinobacter adhaerens HP15 0.27 HP15_280 putative oxygen-independent coproporphyrinogen III oxidase 0.21 HP15_3374 protein CrcB-like protein low > 73
Acinetobacter radioresistens SK82 0.25 MPMX26_00308 Heme chaperone HemW 0.25 MPMX26_00303 Putative fluoride ion transporter CrcB low > 36
Bifidobacterium breve UCC2003 0.24 BBR_RS15235 coproporphyrinogen III oxidase 0.23 BBR_RS13525 CrcB family protein low > 34
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS06440 radical SAM family heme chaperone HemW 0.29 HMPREF1181_RS13275 fluoride efflux transporter CrcB low > 56
Bacteroides thetaiotaomicron VPI-5482 0.23 BT2168 coproporphyrinogen III oxidase (NCBI ptt file) 0.23 BT4574 conserved hypothetical protein (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.22 HMPREF1058_RS07680 radical SAM family heme chaperone HemW 0.27 HMPREF1058_RS04670 fluoride efflux transporter CrcB low > 67
Bacteroides ovatus ATCC 8483 0.19 BACOVA_03177 putative oxygen-independent coproporphyrinogen III oxidase 0.28 BACOVA_05372 protein CrcB low > 94

Not shown: 39 genomes with orthologs for PGA1_c35050 only; 4 genomes with orthologs for PGA1_c01940 only