Conservation of cofitness between PS417_06775 and PS417_00660 in Pseudomonas simiae WCS417

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_06775 antibiotic transporter 1.0 PS417_00660 DSBA oxidoreductase 0.52 14
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit 0.98 PFLU_RS00670 HlyD family secretion protein low > 109
Pseudomonas fluorescens SBW25 0.92 PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit 0.98 PFLU_RS00670 HlyD family secretion protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_3247 Multidrug efflux RND membrane fusion protein MexC 0.77 Pf1N1B4_1677 Membrane fusion component of tripartite multidrug resistance system — —
Pseudomonas sp. RS175 0.78 PFR28_00632 putative efflux pump periplasmic linker TtgA 0.69 PFR28_04797 Colistin resistance protein EmrA low > 88
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_17300 antibiotic transporter 0.75 AO353_11230 disulfide bond formation protein DsbA low > 101
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_4580 Multidrug efflux RND membrane fusion protein MexC 0.75 PfGW456L13_525 Membrane fusion component of tripartite multidrug resistance system low > 87
Pseudomonas putida KT2440 0.74 PP_1386 Probable efflux pump periplasmic linker TtgA 0.57 PP_1272 putative Multidrug efflux MFS membrane fusion protein low > 96
Pseudomonas sp. S08-1 0.67 OH686_16045 Multidrug efflux system, membrane fusion component 0.27 OH686_04565 Membrane fusion component of MSF-type tripartite multidrug efflux system low > 80
Rahnella sp. WP5 0.50 EX31_RS13320 efflux RND transporter periplasmic adaptor subunit 0.41 EX31_RS24240 HlyD family secretion protein low > 89
Escherichia fergusonii Becca 0.50 EFB2_03595 Multidrug efflux pump subunit AcrA 0.32 EFB2_02590 Colistin resistance protein EmrA low > 86
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS29870 efflux RND transporter periplasmic adaptor subunit 0.44 QEN71_RS38295 HlyD family secretion protein low > 153
Serratia liquefaciens MT49 0.49 IAI46_05190 multidrug efflux RND transporter periplasmic adaptor subunit SdeX 0.44 IAI46_06625 HlyD family secretion protein low > 86
Pantoea sp. MT58 0.49 IAI47_14510 efflux RND transporter periplasmic adaptor subunit 0.43 IAI47_05585 HlyD family secretion protein low > 76
Erwinia tracheiphila SCR3 0.49 LU632_RS18180 efflux RND transporter periplasmic adaptor subunit 0.41 LU632_RS04700 HlyD family secretion protein — —
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS32415 hemolysin D 0.35 RR42_RS27150 hemolysin D low > 128
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS16175 hemolysin D 0.44 BPHYT_RS10535 DSBA oxidoreductase low > 109
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.1793.1 RND efflux system, membrane fusion protein CmeA 0.29 Xcc-8004.2207.1 Membrane fusion component of tripartite multidrug resistance system low > 74
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS19790 efflux RND transporter periplasmic adaptor subunit 0.26 RALBFv3_RS05750 HlyD family secretion protein low > 76
Ralstonia solanacearum UW163 0.47 UW163_RS19385 efflux RND transporter periplasmic adaptor subunit 0.26 UW163_RS07875 HlyD family secretion protein — —
Ralstonia solanacearum GMI1000 0.46 RS_RS21035 efflux RND transporter periplasmic adaptor subunit 0.34 RS_RS19270 HlyD family secretion protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04171 membrane fusion protein, multidrug efflux system 0.43 H281DRAFT_00348 membrane fusion protein, multidrug efflux system low > 103
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS18280 efflux RND transporter periplasmic adaptor subunit 0.27 ABZR86_RS03380 HlyD family secretion protein low > 74
Paraburkholderia graminis OAS925 0.46 ABIE53_003409 membrane fusion protein (multidrug efflux system) 0.45 ABIE53_002588 membrane fusion protein (multidrug efflux system) low > 113
Ralstonia solanacearum PSI07 0.46 RPSI07_RS03395 efflux RND transporter periplasmic adaptor subunit 0.25 RPSI07_RS11550 HlyD family secretion protein low > 81
Azospirillum sp. SherDot2 0.45 MPMX19_05883 Multidrug resistance protein MexA 0.34 MPMX19_04288 Colistin resistance protein EmrA low > 112
Rhodospirillum rubrum S1H 0.43 Rru_A2050 Secretion protein HlyD (NCBI) 0.33 Rru_A0156 Secretion protein HlyD (NCBI) low > 58
Azospirillum brasilense Sp245 0.43 AZOBR_RS30180 hemolysin D 0.33 AZOBR_RS19970 multidrug transporter low > 97
Sphingomonas koreensis DSMZ 15582 0.43 Ga0059261_0560 RND family efflux transporter, MFP subunit 0.23 Ga0059261_1225 Multidrug resistance efflux pump low > 68
Rhizobium sp. OAE497 0.42 ABIE40_RS24220 efflux RND transporter periplasmic adaptor subunit 0.36 ABIE40_RS21115 HlyD family secretion protein low > 107
Shewanella oneidensis MR-1 0.42 SO4693 multidrug resistance protein, AcrA/AcrE family (NCBI ptt file) 0.27 SO0524 HlyD family secretion protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.42 Sama_3553 multidrug resistance protein AcrA/AcrE family (RefSeq) 0.28 Sama_0402 HlyD family secretion protein (RefSeq) low > 62
Shewanella loihica PV-4 0.41 Shew_0031 RND family efflux transporter MFP subunit (RefSeq) 0.28 Shew_1543 secretion protein HlyD family protein (RefSeq) low > 60
Rhodopseudomonas palustris CGA009 0.40 TX73_012250 efflux RND transporter periplasmic adaptor subunit 0.29 TX73_021260 HlyD family secretion protein low > 86
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_00851 periplasmic multidrug efflux lipoprotein precursor 0.28 CCNA_03830 multidrug resistance protein A, efflux pump low > 67
Caulobacter crescentus NA1000 0.38 CCNA_00851 periplasmic multidrug efflux lipoprotein precursor 0.28 CCNA_03830 multidrug resistance protein A, efflux pump low > 66
Alteromonas macleodii MIT1002 0.34 MIT1002_00134 Acriflavine resistance protein A precursor 0.13 MIT1002_01187 Multidrug resistance protein MdtN low > 70
Lysobacter sp. OAE881 0.28 ABIE51_RS17985 efflux RND transporter periplasmic adaptor subunit 0.32 ABIE51_RS02575 HlyD family secretion protein low > 62
Parabacteroides merdae CL09T00C40 0.20 HMPREF1078_RS13655 efflux RND transporter periplasmic adaptor subunit 0.10 HMPREF1078_RS10220 efflux RND transporter periplasmic adaptor subunit low > 61
Bacteroides thetaiotaomicron VPI-5482 0.20 BT3339 RND efflux system for fusidic acid, chlorpromazine, and thioridazine, membrane fusion component (from data) 0.23 BT1249 putative multidrug resistance protein (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.20 BACOVA_01991 efflux transporter, RND family, MFP subunit 0.26 BACOVA_01377 auxiliary transport protein, membrane fusion protein (MFP) family protein low > 94
Pedobacter sp. GW460-11-11-14-LB5 0.20 CA265_RS23015 efflux transporter periplasmic adaptor subunit 0.27 CA265_RS21340 secretion protein HlyD low > 88
Phocaeicola vulgatus CL09T03C04 0.19 HMPREF1058_RS02105 efflux RND transporter periplasmic adaptor subunit 0.09 HMPREF1058_RS06095 biotin/lipoyl-binding protein low > 67

Not shown: 35 genomes with orthologs for PS417_06775 only; 7 genomes with orthologs for PS417_00660 only