Conservation of cofitness between PS417_04375 and PS417_06175 in Pseudomonas simiae WCS417

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04375 ABC transporter ATP-binding protein 1.0 PS417_06175 cysteine sulfinate desulfinase 0.29 19
Pseudomonas fluorescens SBW25 0.99 PFLU_RS04430 ATP-binding cassette domain-containing protein 0.98 PFLU_RS06240 cysteine desulfurase low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS04430 ATP-binding cassette domain-containing protein 0.98 PFLU_RS06240 cysteine desulfurase low > 109
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_05150 ABC transporter ATP-binding protein 0.85 AO353_16430 cysteine sulfinate desulfinase low > 101
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_5008 Uncharacterized ABC transporter, ATP-binding protein YrbF 0.86 PfGW456L13_4717 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA low > 87
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_07005 ABC transporter ATP-binding protein 0.88 AO356_06075 cysteine sulfinate desulfinase low > 104
Pseudomonas putida KT2440 0.94 PP_0958 phospholipid ABC transporter ATP-binding subunit 0.80 PP_1529 Probable cysteine desulfurase low > 96
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_3260 Uncharacterized ABC transporter, ATP-binding protein YrbF 0.88 Pf6N2E2_3079 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA low > 103
Pseudomonas sp. RS175 0.94 PFR28_00179 Intermembrane phospholipid transport system ATP-binding protein MlaF 0.83 PFR28_00389 Cysteine desulfurase SufS low > 88
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_4141 ABC transporter 0.80 Psyr_1335 Aminotransferase, class V low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_4141 ABC transporter 0.80 Psyr_1335 Aminotransferase, class V low > 86
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_1074 Uncharacterized ABC transporter, ATP-binding protein YrbF 0.88 Pf1N1B4_3076 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA
Pseudomonas sp. S08-1 0.91 OH686_08510 Phospholipid ABC transporter ATP-binding protein MlaF 0.72 OH686_06515 Cysteine desulfurase low > 80
Pseudomonas stutzeri RCH2 0.86 Psest_3307 ABC-type transport system involved in resistance to organic solvents, ATPase component 0.72 Psest_1464 Selenocysteine lyase low > 67
Rahnella sp. WP5 0.68 EX31_RS12435 phospholipid ABC transporter ATP-binding protein MlaF 0.40 EX31_RS13120 cysteine desulfurase CsdA low > 89
Marinobacter adhaerens HP15 0.64 HP15_2436 toluene tolerance ABC efflux transporter, ATP-binding protein 0.44 HP15_2987 cysteine desulfurase, SufS subfamily
Shewanella amazonensis SB2B 0.63 Sama_3081 ABC transporter, ATP-binding protein, putative (RefSeq) 0.42 Sama_2777 aminotransferase, class V (RefSeq) low > 62
Pantoea sp. MT58 0.63 IAI47_17145 phospholipid ABC transporter ATP-binding protein MlaF 0.38 IAI47_10860 cysteine desulfurase SufS
Pectobacterium carotovorum WPP14 0.62 HER17_RS20025 phospholipid ABC transporter ATP-binding protein MlaF 0.40 HER17_RS16425 cysteine desulfurase CsdA low > 75
Shewanella sp. ANA-3 0.62 Shewana3_0678 ABC transporter related (RefSeq) 0.41 Shewana3_0808 cysteine desulfurase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.62 SO3954 ABC transporter, ATP-binding protein, putative (NCBI ptt file) 0.41 SO3789 aminotransferase, class V (NCBI ptt file) low > 76
Dickeya dadantii 3937 0.61 DDA3937_RS01565 phospholipid ABC transporter ATP-binding protein MlaF 0.41 DDA3937_RS05040 cysteine desulfurase CsdA low > 74
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_12775 phospholipid ABC transporter ATP-binding protein MlaF 0.44 CSW01_11740 cysteine desulfurase CsdA low > 62
Serratia liquefaciens MT49 0.60 IAI46_22430 phospholipid ABC transporter ATP-binding protein MlaF 0.40 IAI46_11165 cysteine desulfurase SufS low > 86
Dickeya dianthicola ME23 0.60 DZA65_RS01545 phospholipid ABC transporter ATP-binding protein MlaF 0.40 DZA65_RS05385 cysteine desulfurase CsdA low > 75
Dickeya dianthicola 67-19 0.60 HGI48_RS01480 phospholipid ABC transporter ATP-binding protein MlaF 0.40 HGI48_RS05045 cysteine desulfurase CsdA low > 71
Shewanella loihica PV-4 0.60 Shew_3304 ABC transporter-related protein (RefSeq) 0.42 Shew_0735 SufS subfamily cysteine desulfurase (RefSeq) low > 60
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS18970 toluene ABC transporter ATP-binding protein 0.20 RR42_RS21580 cysteine desulfurase low > 128
Erwinia tracheiphila SCR3 0.58 LU632_RS21245 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.37 LU632_RS06240 csdA cysteine desulfurase CsdA low > 74
Klebsiella michiganensis M5al 0.58 BWI76_RS25230 phospholipid ABC transporter ATP-binding protein MlaF 0.38 BWI76_RS22965 cysteine sulfinate desulfinase low > 92
Enterobacter sp. TBS_079 0.58 MPMX20_04101 Intermembrane phospholipid transport system ATP-binding protein MlaF 0.37 MPMX20_03673 Cysteine desulfurase CsdA low > 85
Enterobacter asburiae PDN3 0.58 EX28DRAFT_3249 ABC-type transport system involved in resistance to organic solvents, ATPase component 0.37 EX28DRAFT_2886 cysteine desulfurase, catalytic subunit CsdA low > 76
Alteromonas macleodii MIT1002 0.58 MIT1002_00834 putative ABC transporter ATP-binding protein 0.44 MIT1002_02797 putative cysteine desulfurase
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS11885 ATP-binding cassette domain-containing protein 0.36 ABZR86_RS09460 cysteine desulfurase
Escherichia coli BL21 0.56 ECD_03060 ABC transporter maintaining OM lipid asymmetry, ATP-binding protein 0.38 ECD_02661 cysteine sulfinate desulfinase low > 60
Escherichia coli Nissle 1917 0.56 ECOLIN_RS18390 phospholipid ABC transporter ATP-binding protein MlaF 0.38 ECOLIN_RS15660 cysteine desulfurase CsdA low > 52
Escherichia coli ECOR27 0.56 NOLOHH_09775 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.38 NOLOHH_11985 csdA cysteine desulfurase CsdA low > 57
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF2939 Uncharacterized ABC transporter, ATP-binding protein YrbF 0.38 GFF3562 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily low > 78
Escherichia coli ECRC99 0.56 KEDOAH_10175 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.38 KEDOAH_08025 csdA cysteine desulfurase CsdA
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_00505 putative phospholipid import ATP-binding protein MlaF 0.37 OHPLBJKB_00921 Cysteine desulfurase CsdA low > 73
Escherichia coli ECRC98 0.56 JDDGAC_21600 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.38 JDDGAC_23770 csdA cysteine desulfurase CsdA
Escherichia coli BW25113 0.56 b3195 yrbF predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) 0.38 b2810 csdA cysteine sulfinate desulfinase (NCBI) low > 76
Escherichia coli ECOR38 0.56 HEPCGN_16850 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.38 HEPCGN_19360 csdA cysteine desulfurase CsdA low > 85
Escherichia fergusonii Becca 0.56 EFB2_00628 Intermembrane phospholipid transport system ATP-binding protein MlaF 0.38 EFB2_01107 Cysteine desulfurase CsdA low > 86
Escherichia coli ECRC101 0.56 OKFHMN_17975 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.38 OKFHMN_20105 csdA cysteine desulfurase CsdA
Escherichia coli ECRC62 0.56 BNILDI_01760 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.38 BNILDI_10490 csdA cysteine desulfurase CsdA
Escherichia coli ECRC102 0.56 NIAGMN_15735 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.38 NIAGMN_17875 csdA cysteine desulfurase CsdA
Escherichia coli ECRC101 0.56 MCAODC_08495 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.38 MCAODC_10630 csdA cysteine desulfurase CsdA
Rhodanobacter sp. FW510-T8 0.56 OKGIIK_12135 mlaF ABC transporter ATP-binding protein 0.35 OKGIIK_09950 sufS,csdA cysteine desulfurase CsdA
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS11760 ATP-binding cassette domain-containing protein 0.35 LRK54_RS03080 cysteine desulfurase
Rhodanobacter denitrificans MT42 0.53 LRK55_RS11485 ATP-binding cassette domain-containing protein 0.35 LRK55_RS02830 cysteine desulfurase
Lysobacter sp. OAE881 0.47 ABIE51_RS01015 ABC transporter ATP-binding protein 0.37 ABIE51_RS15745 cysteine desulfurase
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.5363.1 Uncharacterized ABC transporter, ATP-binding protein YrbF 0.37 Xcc-8004.1697.1 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Castellaniella sp019104865 MT123 0.46 ABCV34_RS11180 ABC transporter ATP-binding protein 0.40 ABCV34_RS04680 cysteine desulfurase
Dinoroseobacter shibae DFL-12 0.30 Dshi_2380 ABC transporter related (RefSeq) 0.37 Dshi_1623 cysteine desulfurase, SufS subfamily (RefSeq)
Bacteroides ovatus ATCC 8483 0.28 BACOVA_00332 ABC transporter, ATP-binding protein 0.39 BACOVA_01897 cysteine desulfurase, SufS subfamily

Not shown: 18 genomes with orthologs for PS417_04375 only; 20 genomes with orthologs for PS417_06175 only