Conservation of cofitness between EX28DRAFT_3732 and EX28DRAFT_2535 in Enterobacter asburiae PDN3

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_3732 poly(A) polymerase 1.0 EX28DRAFT_2535 trigger factor 0.67 8
Enterobacter sp. TBS_079 0.89 MPMX20_00829 Poly(A) polymerase I 0.99 MPMX20_01027 Trigger factor low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF89 Poly(A) polymerase (EC 2.7.7.19) 0.95 GFF4352 Cell division trigger factor (EC 5.2.1.8) low > 78
Escherichia fergusonii Becca 0.85 EFB2_03901 Poly(A) polymerase I 0.94 EFB2_03621 Trigger factor 0.72 21
Escherichia coli BL21 0.85 ECD_00142 poly(A) polymerase 0.94 ECD_00387 peptidyl-prolyl cis/trans isomerase (trigger factor) low > 61
Escherichia coli ECRC102 0.85 NIAGMN_08205 pcnB polynucleotide adenylyltransferase PcnB 0.94 NIAGMN_06395 tig trigger factor — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_03519 Poly(A) polymerase I 0.94 OHPLBJKB_03237 Trigger factor low > 73
Escherichia coli ECRC100 0.85 OKFHMN_10355 pcnB polynucleotide adenylyltransferase PcnB 0.94 OKFHMN_08340 tig trigger factor 0.86 19
Escherichia coli ECRC99 0.85 KEDOAH_17800 pcnB polynucleotide adenylyltransferase PcnB 0.94 KEDOAH_19625 tig trigger factor — —
Escherichia coli BW25113 0.85 b0143 pcnB poly(A) polymerase I (VIMSS) 0.94 b0436 tig trigger factor (NCBI) low > 76
Escherichia coli Nissle 1917 0.85 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB 0.95 ECOLIN_RS02620 trigger factor 0.78 17
Escherichia coli ECRC101 0.85 MCAODC_00870 pcnB polynucleotide adenylyltransferase PcnB 0.94 MCAODC_27565 tig trigger factor 0.55 67
Escherichia coli ECOR38 0.85 HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB 0.94 HEPCGN_06955 tig trigger factor low > 87
Escherichia coli ECRC98 0.85 JDDGAC_13950 pcnB polynucleotide adenylyltransferase PcnB 0.94 JDDGAC_11995 tig trigger factor 0.93 12
Escherichia coli ECRC62 0.85 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB 0.94 BNILDI_22690 tig trigger factor low > 75
Escherichia coli ECOR27 0.85 NOLOHH_02700 pcnB polynucleotide adenylyltransferase PcnB 0.94 NOLOHH_01275 tig trigger factor low > 75
Klebsiella michiganensis M5al 0.82 BWI76_RS05005 polynucleotide adenylyltransferase 0.95 BWI76_RS06520 trigger factor low > 92
Erwinia tracheiphila SCR3 0.78 LU632_RS20090 pcnB polynucleotide adenylyltransferase PcnB 0.85 LU632_RS18350 tig trigger factor low > 74
Dickeya dadantii 3937 0.77 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB 0.85 DDA3937_RS05635 trigger factor low > 74
Dickeya dianthicola 67-19 0.76 HGI48_RS16060 polynucleotide adenylyltransferase PcnB 0.84 HGI48_RS05680 trigger factor low > 71
Dickeya dianthicola ME23 0.76 DZA65_RS17145 polynucleotide adenylyltransferase PcnB 0.84 DZA65_RS06005 trigger factor low > 75
Pantoea sp. MT58 0.76 IAI47_15645 polynucleotide adenylyltransferase PcnB 0.87 IAI47_14660 trigger factor low > 76
Serratia liquefaciens MT49 0.76 IAI46_21220 polynucleotide adenylyltransferase PcnB 0.86 IAI46_05005 trigger factor low > 86
Pectobacterium carotovorum WPP14 0.75 HER17_RS05570 polynucleotide adenylyltransferase PcnB 0.84 HER17_RS15855 trigger factor low > 75
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_03145 polynucleotide adenylyltransferase PcnB 0.71 CSW01_09620 trigger factor low > 62
Shewanella oneidensis MR-1 0.54 SO0872 pcnB polyA polymerase (NCBI ptt file) 0.62 SO1793 tig trigger factor (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.54 Shewana3_3406 poly(A) polymerase (RefSeq) 0.62 Shewana3_2662 tig trigger factor (RefSeq) low > 73
Shewanella loihica PV-4 0.52 Shew_3131 poly(A) polymerase (RefSeq) 0.63 Shew_2509 tig trigger factor (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.52 MIT1002_03692 Poly(A) polymerase I precursor 0.59 MIT1002_02761 Trigger factor low > 70
Shewanella amazonensis SB2B 0.51 Sama_0778 tRNA nucleotidyltransferase (CCA-adding enzyme) (RefSeq) 0.64 Sama_1223 tig trigger factor (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_0058 poly(A) polymerase 0.45 B158DRAFT_1033 trigger factor low > 40
Marinobacter adhaerens HP15 0.46 HP15_326 polyA polymerase 0.48 HP15_2186 trigger factor low > 73
Rhodanobacter denitrificans MT42 0.45 LRK55_RS14820 polynucleotide adenylyltransferase PcnB 0.30 LRK55_RS16445 trigger factor low > 63
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS15105 polynucleotide adenylyltransferase PcnB 0.30 LRK54_RS16720 trigger factor low > 59
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_03875 pcnB tRNA nucleotidyltransferase/poly(A) polymerase 0.29 OKGIIK_08045 tig trigger factor low > 52
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS00805 polynucleotide adenylyltransferase PcnB 0.30 ABZR86_RS07335 trigger factor low > 74
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.3054.1 Poly(A) polymerase (EC 2.7.7.19) 0.28 Xcc-8004.4049.1 Cell division trigger factor (EC 5.2.1.8) low > 74
Lysobacter sp. OAE881 0.44 ABIE51_RS08015 polynucleotide adenylyltransferase PcnB 0.30 ABIE51_RS14160 trigger factor low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_0830 Poly(A) polymerase 0.50 Psyr_1746 Trigger factor low > 86
Pseudomonas putida KT2440 0.43 PP_4697 poly(A) polymerase 0.50 PP_2299 Trigger factor low > 96
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_0830 Poly(A) polymerase 0.50 Psyr_1746 Trigger factor low > 86
Pseudomonas sp. S08-1 0.43 OH686_17255 Poly(A) polymerase 0.50 OH686_03650 trigger factor low > 80
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_14395 poly(A) polymerase 0.50 AO353_20170 trigger factor low > 101
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_2856 Poly(A) polymerase (EC 2.7.7.19) 0.49 Pf1N1B4_3944 Cell division trigger factor (EC 5.2.1.8) — —
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1523 Poly(A) polymerase (EC 2.7.7.19) 0.49 PfGW456L13_2551 Cell division trigger factor (EC 5.2.1.8) low > 87
Pseudomonas fluorescens SBW25 0.42 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.50 PFLU_RS19175 trigger factor low > 109
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.50 PFLU_RS19175 trigger factor low > 109
Pseudomonas sp. RS175 0.42 PFR28_03719 Poly(A) polymerase I 0.48 PFR28_01227 Trigger factor low > 88
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_5155 Poly(A) polymerase (EC 2.7.7.19) 0.51 Pf6N2E2_2219 Cell division trigger factor (EC 5.2.1.8) 0.44 27
Pseudomonas simiae WCS417 0.42 PS417_23900 poly(A) polymerase 0.50 PS417_17240 trigger factor low > 88
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_16070 poly(A) polymerase 0.51 AO356_01755 trigger factor low > 104
Pseudomonas stutzeri RCH2 0.41 Psest_0998 poly(A) polymerase 0.50 Psest_2288 trigger factor low > 67
Castellaniella sp019104865 MT123 0.37 ABCV34_RS08810 polynucleotide adenylyltransferase PcnB 0.35 ABCV34_RS05140 trigger factor — —
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS00935 polynucleotide adenylyltransferase PcnB 0.35 ABZR87_RS12800 trigger factor low > 80
Dechlorosoma suillum PS 0.36 Dsui_1515 poly(A) polymerase 0.35 Dsui_2195 trigger factor low > 51
Variovorax sp. OAS795 0.33 ABID97_RS08710 polynucleotide adenylyltransferase PcnB 0.38 ABID97_RS17605 trigger factor low > 91
Variovorax sp. SCN45 0.33 GFF3943 Poly(A) polymerase (EC 2.7.7.19) 0.37 GFF490 Cell division trigger factor (EC 5.2.1.8) low > 127
Acidovorax sp. GW101-3H11 0.32 Ac3H11_1313 Poly(A) polymerase (EC 2.7.7.19) 0.38 Ac3H11_934 Cell division trigger factor (EC 5.2.1.8) — —
Acinetobacter radioresistens SK82 0.30 MPMX26_00543 Poly(A) polymerase I 0.44 MPMX26_00407 Trigger factor low > 36

Not shown: 0 genomes with orthologs for EX28DRAFT_3732 only; 31 genomes with orthologs for EX28DRAFT_2535 only