Conservation of cofitness between ECD_04037 and ECD_02758 in Escherichia coli BL21

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_04037 methyl-directed mismatch repair protein 1.0 ECD_02758 D-erythrose 4-phosphate dehydrogenase 0.41 19
Escherichia coli BW25113 1.00 b4170 mutL DNA mismatch repair protein (NCBI) 1.00 b2927 epd D-erythrose 4-phosphate dehydrogenase (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_06960 mutL DNA mismatch repair endonuclease MutL 1.00 BNILDI_09835 epd erythrose-4-phosphate dehydrogenase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03872 DNA mismatch repair protein MutL 1.00 OHPLBJKB_00789 D-erythrose-4-phosphate dehydrogenase low > 73
Escherichia coli ECOR27 1.00 NOLOHH_04530 mutL DNA mismatch repair endonuclease MutL 1.00 NOLOHH_11295 epd erythrose-4-phosphate dehydrogenase low > 75
Escherichia coli ECOR38 0.99 HEPCGN_10495 mutL DNA mismatch repair endonuclease MutL 1.00 HEPCGN_18695 epd erythrose-4-phosphate dehydrogenase low > 87
Escherichia coli ECRC100 0.99 OKFHMN_12265 mutL DNA mismatch repair endonuclease MutL 1.00 OKFHMN_19385 epd erythrose-4-phosphate dehydrogenase low > 80
Escherichia coli ECRC99 0.99 KEDOAH_15890 mutL DNA mismatch repair endonuclease MutL 1.00 KEDOAH_08755 epd erythrose-4-phosphate dehydrogenase — —
Escherichia coli ECRC98 0.99 JDDGAC_15905 mutL DNA mismatch repair endonuclease MutL 1.00 JDDGAC_23015 epd erythrose-4-phosphate dehydrogenase low > 86
Escherichia coli ECRC101 0.99 MCAODC_02780 mutL DNA mismatch repair endonuclease MutL 1.00 MCAODC_09905 epd erythrose-4-phosphate dehydrogenase low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24220 DNA mismatch repair endonuclease MutL 1.00 ECOLIN_RS16265 erythrose-4-phosphate dehydrogenase 0.45 25
Escherichia coli ECRC102 0.99 NIAGMN_10115 mutL DNA mismatch repair endonuclease MutL 1.00 NIAGMN_17150 epd erythrose-4-phosphate dehydrogenase — —
Escherichia fergusonii Becca 0.99 EFB2_04365 DNA mismatch repair protein MutL 1.00 EFB2_00979 D-erythrose-4-phosphate dehydrogenase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF823 DNA mismatch repair protein MutL 0.95 GFF3022 D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) low > 78
Klebsiella michiganensis M5al 0.83 BWI76_RS02525 DNA mismatch repair protein MutL 0.92 BWI76_RS23985 erythrose-4-phosphate dehydrogenase 0.24 60
Enterobacter sp. TBS_079 0.81 MPMX20_00451 DNA mismatch repair protein MutL 0.96 MPMX20_03779 D-erythrose-4-phosphate dehydrogenase low > 85
Enterobacter asburiae PDN3 0.80 EX28DRAFT_3367 DNA mismatch repair protein MutL 0.95 EX28DRAFT_2973 erythrose-4-phosphate dehydrogenase low > 76
Pantoea sp. MT58 0.67 IAI47_02580 DNA mismatch repair endonuclease MutL 0.85 IAI47_03685 erythrose-4-phosphate dehydrogenase low > 76
Serratia liquefaciens MT49 0.67 IAI46_01615 DNA mismatch repair endonuclease MutL 0.82 IAI46_21015 erythrose-4-phosphate dehydrogenase low > 86
Erwinia tracheiphila SCR3 0.65 LU632_RS02045 mutL DNA mismatch repair endonuclease MutL 0.83 LU632_RS05535 epd erythrose-4-phosphate dehydrogenase low > 74
Rahnella sp. WP5 0.65 EX31_RS08830 DNA mismatch repair endonuclease MutL 0.81 EX31_RS21405 erythrose-4-phosphate dehydrogenase low > 89
Pectobacterium carotovorum WPP14 0.64 HER17_RS02575 DNA mismatch repair endonuclease MutL 0.85 HER17_RS02685 erythrose-4-phosphate dehydrogenase low > 75
Dickeya dadantii 3937 0.62 DDA3937_RS18620 DNA mismatch repair endonuclease MutL 0.82 DDA3937_RS18520 erythrose-4-phosphate dehydrogenase low > 74
Dickeya dianthicola ME23 0.61 DZA65_RS19690 DNA mismatch repair endonuclease MutL 0.82 DZA65_RS19580 erythrose-4-phosphate dehydrogenase low > 75
Dickeya dianthicola 67-19 0.61 HGI48_RS18555 DNA mismatch repair endonuclease MutL 0.82 HGI48_RS18445 erythrose-4-phosphate dehydrogenase low > 71
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_01825 DNA mismatch repair protein MutL 0.71 CSW01_02530 D-erythrose-4-phosphate dehydrogenase low > 62
Shewanella amazonensis SB2B 0.39 Sama_3027 mutL DNA mismatch repair protein (RefSeq) 0.64 Sama_2758 erythrose 4-phosphate dehydrogenase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.39 SO0601 mutL DNA mismatch repair protein MutL (NCBI ptt file) 0.66 SO0931 epd D-erythrose-4-phosphate dehydrogenase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.38 Shew_0564 DNA mismatch repair protein MutL (RefSeq) 0.66 Shew_0753 erythrose 4-phosphate dehydrogenase (RefSeq) — —
Shewanella sp. ANA-3 0.38 Shewana3_0595 mutL DNA mismatch repair protein (RefSeq) 0.67 Shewana3_3352 erythrose 4-phosphate dehydrogenase (RefSeq) low > 73
Pseudomonas stutzeri RCH2 0.36 Psest_0681 DNA mismatch repair protein MutL 0.52 Psest_0329 erythrose-4-phosphate dehydrogenase — —
Pseudomonas sp. S08-1 0.36 OH686_09480 DNA mismatch repair protein MutL 0.53 OH686_10765 erythrose-4-phosphate dehydrogenase — —
Marinobacter adhaerens HP15 0.35 HP15_2501 DNA mismatch repair protein mutL 0.54 HP15_2912 glyceraldehyde 3-phosphate dehydrogenase, type I — —
Pseudomonas putida KT2440 0.35 PP_4896 DNA mismatch repair protein MutL 0.53 PP_4964 D-erythrose 4-phosphate dehydrogenase 0.28 68
Pseudomonas simiae WCS417 0.35 PS417_02480 DNA mismatch repair protein 0.52 PS417_26435 glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS02560 DNA mismatch repair endonuclease MutL 0.52 PFLU_RS28090 erythrose-4-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25 0.35 PFLU_RS02560 DNA mismatch repair endonuclease MutL 0.52 PFLU_RS28090 erythrose-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_3616 DNA mismatch repair protein MutL 0.53 Pf6N2E2_4656 D-erythrose-4-phosphate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_0570 DNA mismatch repair protein MutL 0.52 Psyr_4791 D-erythrose-4-phosphate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_0570 DNA mismatch repair protein MutL 0.52 Psyr_4791 D-erythrose-4-phosphate dehydrogenase low > 86
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_156 DNA mismatch repair protein MutL 0.53 PfGW456L13_1065 D-erythrose-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_08665 DNA mismatch repair protein 0.54 AO356_13685 glyceraldehyde-3-phosphate dehydrogenase low > 104
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_1414 DNA mismatch repair protein MutL 0.53 Pf1N1B4_2398 D-erythrose-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_13135 DNA mismatch repair protein 0.52 AO353_07950 glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas sp. RS175 0.34 PFR28_05119 DNA mismatch repair protein MutL 0.54 PFR28_04187 D-erythrose-4-phosphate dehydrogenase — —
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS00855 DNA mismatch repair endonuclease MutL 0.52 ABZR86_RS18615 type I glyceraldehyde-3-phosphate dehydrogenase low > 74
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS04190 DNA mismatch repair protein 0.52 HSERO_RS07125 glyceraldehyde-3-phosphate dehydrogenase — —
Dechlorosoma suillum PS 0.27 Dsui_1551 DNA mismatch repair protein MutL 0.46 Dsui_1558 glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS26435 DNA mismatch repair endonuclease MutL 0.55 QEN71_RS27005 type I glyceraldehyde-3-phosphate dehydrogenase low > 153
Acinetobacter radioresistens SK82 0.25 MPMX26_01207 DNA mismatch repair protein MutL 0.45 MPMX26_01087 D-erythrose-4-phosphate dehydrogenase low > 36
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_04712 DNA mismatch repair protein MutL 0.54 H281DRAFT_06315 glyceraldehyde-3-phosphate dehydrogenase (NAD+) low > 103
Castellaniella sp019104865 MT123 0.25 ABCV34_RS08785 DNA mismatch repair endonuclease MutL 0.52 ABCV34_RS15455 type I glyceraldehyde-3-phosphate dehydrogenase — —
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS03650 DNA mismatch repair protein 0.54 BPHYT_RS16835 glyceraldehyde-3-phosphate dehydrogenase low > 109
Azospirillum sp. SherDot2 0.22 MPMX19_01619 DNA mismatch repair protein MutL 0.48 MPMX19_00689 Glyceraldehyde-3-phosphate dehydrogenase 1 low > 112
Rhodospirillum rubrum S1H 0.22 Rru_A2946 DNA mismatch repair protein (NCBI) 0.47 Rru_A0222 Glyceraldehyde-3-phosphate dehydrogenase, type I (NCBI) — —
Phaeobacter inhibens DSM 17395 0.21 PGA1_c32740 DNA mismatch repair protein MutL 0.46 PGA1_c27490 glyceraldehyde-3-phosphate dehydrogenase Gap — —
Bosea sp. OAE506 0.19 ABIE41_RS23235 DNA mismatch repair endonuclease MutL 0.44 ABIE41_RS09420 type I glyceraldehyde-3-phosphate dehydrogenase — —

Not shown: 23 genomes with orthologs for ECD_04037 only; 9 genomes with orthologs for ECD_02758 only