Conservation of cofitness between ECD_02848 and ECD_02244 in Escherichia coli BL21

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02848 glycolate oxidase subunit, FAD-linked 1.0 ECD_02244 putative semialdehyde dehydrogenase 0.41 61
Escherichia fergusonii Becca 1.00 EFB2_00835 putative FAD-linked oxidoreductase 1.00 EFB2_01539 USG-1 protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00727 putative FAD-linked oxidoreductase 1.00 OHPLBJKB_01386 USG-1 protein low > 73
Escherichia coli ECRC62 1.00 BNILDI_00595 glcD glycolate oxidase subunit GlcD 1.00 BNILDI_13220 usg aspartate-semialdehyde dehydrogenase low > 75
Escherichia coli BW25113 1.00 b2979 glcD glycolate dehydrogenase, putative FAD-linked subunit (from data) 1.00 b2319 usg hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_10920 glcD glycolate oxidase subunit GlcD 1.00 NOLOHH_14300 usg aspartate-semialdehyde dehydrogenase low > 75
Escherichia coli ECOR38 0.99 HEPCGN_17995 glcD glycolate oxidase subunit GlcD 1.00 HEPCGN_21870 usg aspartate-semialdehyde dehydrogenase low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17140 glycolate oxidase subunit GlcD 0.99 ECOLIN_RS13440 aspartate-semialdehyde dehydrogenase low > 55
Pseudomonas stutzeri RCH2 0.84 Psest_3841 D-lactate/glycolate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6; EC 1.1.99.14) (from data) 0.29 Psest_2587 Aspartate-semialdehyde dehydrogenase low > 67
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_5862 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.33 Pf1N1B4_10 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) low > 87
Pseudomonas putida KT2440 0.82 PP_3745 glycolate oxidase, putative FAD-linked subunit 0.30 PP_1992 aspartate-semialdehyde dehydrogenase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_3331 Glycolate oxidase subunit GlcD 0.33 Psyr_1660 Aspartate-semialdehyde dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_3331 Glycolate oxidase subunit GlcD 0.33 Psyr_1660 Aspartate-semialdehyde dehydrogenase low > 86
Pseudomonas sp. RS175 0.81 PFR28_02758 putative FAD-linked oxidoreductase 0.36 PFR28_02819 USG-1 protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_01090 glycolate oxidase subunit GlcD 0.35 AO356_21425 aspartate-semialdehyde dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_21310 glycolate oxidase subunit GlcD 0.34 AO353_20645 aspartate-semialdehyde dehydrogenase low > 101
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_137 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.36 Pf6N2E2_68 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) low > 103
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_2631 FAD/FMN-containing dehydrogenases 0.34 Ga0059261_4003 aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)
Rhodopseudomonas palustris CGA009 0.56 TX73_005805 FAD-linked oxidase C-terminal domain-containing protein 0.30 TX73_001190 aspartate-semialdehyde dehydrogenase
Azospirillum sp. SherDot2 0.55 MPMX19_00301 putative FAD-linked oxidoreductase 0.34 MPMX19_02000 Aspartate-semialdehyde dehydrogenase 2 low > 112
Azospirillum brasilense Sp245 0.54 AZOBR_RS05725 FAD-binding protein 0.30 AZOBR_RS13975 aspartate-semialdehyde dehydrogenase low > 97
Synechococcus elongatus PCC 7942 0.47 Synpcc7942_0276 glcD glycolate oxidase subunit GlcD 0.28 Synpcc7942_1848 asd aspartate-semialdehyde dehydrogenase
Agrobacterium fabrum C58 0.43 Atu0665 glycolate oxidase subunit 0.30 Atu2490 aspartate-semialdehyde dehydrogenase
Rhizobium sp. OAE497 0.43 ABIE40_RS03555 FAD-linked oxidase C-terminal domain-containing protein 0.30 ABIE40_RS19095 aspartate-semialdehyde dehydrogenase
Dinoroseobacter shibae DFL-12 0.42 Dshi_2896 FAD linked oxidase domain protein (RefSeq) 0.33 Dshi_3240 aspartate-semialdehyde dehydrogenase (RefSeq)
Sinorhizobium meliloti 1021 0.41 SMc00832 D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) (from data) 0.30 SMc04410 aspartate-semialdehyde dehydrogenase
Phaeobacter inhibens DSM 17395 0.41 PGA1_c29720 D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) (from data) 0.33 PGA1_c31480 aspartate-semialdehyde dehydrogenase Asd
Bosea sp. OAE506 0.40 ABIE41_RS22150 FAD-linked oxidase C-terminal domain-containing protein 0.32 ABIE41_RS08445 aspartate-semialdehyde dehydrogenase
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_1862 FAD linked oxidase domain protein (RefSeq) 0.30 DvMF_2382 aspartate-semialdehyde dehydrogenase (RefSeq)
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU3027 glcD glycolate oxidase, subunit GlcD (TIGR) 0.30 DVU3048 asd aspartate-semialdehyde dehydrogenase (TIGR)
Pontibacter actiniarum KMM 6156, DSM 19842 0.28 CA264_13425 FAD-binding oxidoreductase 0.25 CA264_18890 aspartate-semialdehyde dehydrogenase
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS09620 FAD-binding oxidoreductase 0.24 CA265_RS15395 aspartate-semialdehyde dehydrogenase
Lysobacter sp. OAE881 0.27 ABIE51_RS04670 FAD-linked oxidase C-terminal domain-containing protein 0.35 ABIE51_RS08235 aspartate-semialdehyde dehydrogenase
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_11750 Dimethylmenaquinone methyltransferase 0.36 OKGIIK_04815 asd aspartate-semialdehyde dehydrogenase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS06545 FAD-binding oxidoreductase 0.26 ABZR88_RS18675 aspartate-semialdehyde dehydrogenase
Mycobacterium tuberculosis H37Rv 0.26 Rv1257c Probable oxidoreductase 0.23 Rv3708c Aspartate-semialdehyde dehydrogenase Asd (ASA dehydrogenase) (ASADH) (aspartic semialdehyde dehydrogenase) (L-aspartate-beta-semialdehyde dehydrogenase)
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS12175 FAD-binding protein 0.37 LRK54_RS01715 aspartate-semialdehyde dehydrogenase
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS11500 FAD-linked oxidase C-terminal domain-containing protein 0.38 ABZR86_RS08030 aspartate-semialdehyde dehydrogenase
Rhodanobacter denitrificans MT42 0.25 LRK55_RS11910 FAD-linked oxidase C-terminal domain-containing protein 0.36 LRK55_RS01495 aspartate-semialdehyde dehydrogenase
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.4376.1 D-2-hydroxyglutarate dehydrogenase 0.35 Xcc-8004.1957.1 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Pseudomonas fluorescens SBW25 0.20 PFLU_RS15570 FAD-binding protein 0.33 PFLU_RS20555 aspartate-semialdehyde dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS15570 FAD-binding protein 0.33 PFLU_RS20555 aspartate-semialdehyde dehydrogenase low > 109
Rhodospirillum rubrum S1H 0.19 Rru_A0777 D-lactate dehydrogenase (cytochrome) (NCBI) 0.35 Rru_A1196 Aspartate-semialdehyde dehydrogenase, USG-1 related (NCBI)
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_1492 FAD/FMN-containing dehydrogenases 0.38 B158DRAFT_1481 aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)
Magnetospirillum magneticum AMB-1 0.18 AMB_RS15030 FAD-binding protein 0.35 AMB_RS03035 aspartate-semialdehyde dehydrogenase
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_944 D-2-hydroxyglutarate dehydrogenase 0.35 PfGW456L13_3943 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) low > 87
Pseudomonas sp. S08-1 0.18 OH686_11285 D-2-hydroxyglutarate dehydrogenase 0.31 OH686_04460 Aspartate-semialdehyde dehydrogenase low > 80
Pseudomonas simiae WCS417 0.17 PS417_27035 FAD-linked oxidase 0.33 PS417_18575 aspartate-semialdehyde dehydrogenase low > 88
Brevundimonas sp. GW460-12-10-14-LB2 0.13 A4249_RS05570 FAD-binding oxidoreductase 0.33 A4249_RS12690 aspartate-semialdehyde dehydrogenase
Caulobacter crescentus NA1000 Δfur 0.12 CCNA_03500 FAD/FMN-containing dehydrogenase 0.30 CCNA_00253 aspartate-semialdehyde dehydrogenase low > 67
Caulobacter crescentus NA1000 0.12 CCNA_03500 FAD/FMN-containing dehydrogenase 0.30 CCNA_00253 aspartate-semialdehyde dehydrogenase low > 66

Not shown: 20 genomes with orthologs for ECD_02848 only; 32 genomes with orthologs for ECD_02244 only