Conservation of cofitness between ECD_00741 and ECD_00262 in Escherichia coli BL21

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00741 7,8-diaminopelargonic acid synthase, PLP-dependent 1.0 ECD_00262 cysteine-rich LutA family protein; putative electron transport chain YkgEFG component 0.54 12
Escherichia coli ECRC101 0.99 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.99 MCAODC_28330 ykgE Uncharacterized protein YkgE — —
Escherichia coli ECRC99 0.99 KEDOAH_21505 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.99 KEDOAH_18860 ykgE Uncharacterized protein YkgE — —
Escherichia coli ECOR27 0.99 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.99 NOLOHH_01920 ykgE Uncharacterized protein YkgE low > 57
Escherichia coli ECRC101 0.99 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.99 OKFHMN_09105 ykgE Uncharacterized protein YkgE — —
Escherichia coli ECRC102 0.99 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.99 NIAGMN_07170 ykgE Uncharacterized protein YkgE — —
Escherichia coli ECRC62 0.99 BNILDI_21045 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.99 BNILDI_00045 ykgE Uncharacterized protein YkgE — —
Escherichia coli BW25113 0.99 b0774 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase (NCBI) 1.00 b0306 ykgE predicted oxidoreductase (NCBI) low > 76
Escherichia coli ECRC98 0.99 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.99 JDDGAC_12755 ykgE Uncharacterized protein YkgE — —
Escherichia coli ECOR38 0.99 HEPCGN_01635 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.99 HEPCGN_07630 ykgE Uncharacterized protein YkgE low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.99 OHPLBJKB_03376 Lactate utilization protein A low > 73
Escherichia fergusonii Becca 0.99 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.99 EFB2_03734 Lactate utilization protein A low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04125 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.99 ECOLIN_RS02000 (Fe-S)-binding protein low > 52
Dickeya dadantii 3937 0.76 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.85 DDA3937_RS12255 (Fe-S)-binding protein low > 74
Dickeya dianthicola 67-19 0.75 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.85 HGI48_RS12345 (Fe-S)-binding protein low > 71
Dickeya dianthicola ME23 0.75 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.85 DZA65_RS12785 (Fe-S)-binding protein low > 75
Parabacteroides merdae CL09T00C40 0.61 HMPREF1078_RS15295 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.25 HMPREF1078_RS01305 (Fe-S)-binding protein low > 61
Phocaeicola vulgatus CL09T03C04 0.59 HMPREF1058_RS17955 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.22 HMPREF1058_RS18100 (Fe-S)-binding protein low > 67
Phocaeicola dorei CL03T12C01 0.59 ABI39_RS14245 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.22 ABI39_RS14425 (Fe-S)-binding protein low > 72
Shewanella loihica PV-4 0.56 Shew_1718 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.24 Shew_3004 hypothetical protein (RefSeq) — —
Shewanella sp. ANA-3 0.56 Shewana3_2520 aminotransferase (RefSeq) 0.24 Shewana3_2906 hypothetical protein (RefSeq) — —
Shewanella oneidensis MR-1 0.56 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file) 0.24 SO1520 conserved hypothetical protein (NCBI ptt file) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.54 Echvi_2790 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.28 Echvi_1569 Fe-S oxidoreductase low > 79
Shewanella amazonensis SB2B 0.51 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.24 Sama_2441 hypothetical protein (RefSeq) — —
Pedobacter sp. GW460-11-11-14-LB5 0.35 CA265_RS07530 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.37 CA265_RS07800 Fe-S oxidoreductase low > 88
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_1002 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.30 DvMF_0397 protein of unknown function DUF224 cysteine-rich region domain protein (RefSeq) low > 51
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.30 AO353_05705 oxidoreductase low > 101
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.31 AO356_07555 oxidoreductase low > 104
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.30 PfGW456L13_5115 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE low > 87
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.31 Pf6N2E2_3381 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE low > 103
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.30 Pf1N1B4_1187 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE low > 87
Pseudomonas stutzeri RCH2 0.34 Psest_0306 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.30 Psest_0954 Fe-S oxidoreductase 0.56 14
Pseudomonas sp. RS175 0.34 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.30 PFR28_00062 Lactate utilization protein A low > 88
Azospirillum brasilense Sp245 0.33 AZOBR_RS31120 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.42 AZOBR_RS01615 Fe-S oxidoreductase low > 97
Pontibacter actiniarum KMM 6156, DSM 19842 0.33 CA264_02410 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 CA264_09225 Fe-S oxidoreductase low > 74
Marinobacter adhaerens HP15 0.33 HP15_2925 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.33 HP15_4088 L-lactate dehydrogenase, LutA subunit (from data) low > 73
Magnetospirillum magneticum AMB-1 0.33 AMB_RS13895 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.32 AMB_RS20885 (Fe-S)-binding protein — —
Paraburkholderia graminis OAS925 0.30 ABIE53_000580 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.32 ABIE53_002787 L-lactate dehydrogenase complex protein LldE low > 113
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU2559 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (TIGR) 0.30 DVU1783 cysteine-rich domain protein (TIGR) low > 55
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS02165 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.31 BPHYT_RS12810 Fe-S oxidoreductase low > 109
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 ABZR87_RS13410 (Fe-S)-binding protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_02094 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.31 H281DRAFT_00472 L-lactate dehydrogenase complex protein LldE low > 103
Ralstonia solanacearum PSI07 0.30 RPSI07_RS16705 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.35 RPSI07_RS15875 (Fe-S)-binding protein low > 81
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS00815 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.35 RALBFv3_RS01610 (Fe-S)-binding protein low > 76
Ralstonia solanacearum UW163 0.29 UW163_RS14150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.35 UW163_RS14920 (Fe-S)-binding protein — —
Ralstonia solanacearum GMI1000 0.29 RS_RS07430 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.35 RS_RS08110 (Fe-S)-binding protein low > 80
Dechlorosoma suillum PS 0.29 Dsui_2880 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.36 Dsui_1582 Fe-S oxidoreductase low > 51
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.32 QEN71_RS05755 (Fe-S)-binding protein — —
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.34 RR42_RS07430 Fe-S oxidoreductase low > 128
Rhodospirillum rubrum S1H 0.20 Rru_A1541 Aminotransferase class-III (NCBI) 0.39 Rru_A3606 Protein of unknown function DUF224, cysteine-rich region (NCBI) low > 58

Not shown: 47 genomes with orthologs for ECD_00741 only; 4 genomes with orthologs for ECD_00262 only