| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_03020 | | serine endoprotease DegQ | 1.0 | CSW01_17495 | | glycerol-3-phosphate dehydrogenase | 0.65 | 10 |
| Dickeya dadantii 3937 | 0.63 | DDA3937_RS01605 | | serine endoprotease DegQ | 0.51 | DDA3937_RS19720 | | glycerol-3-phosphate dehydrogenase | — | — |
| Serratia liquefaciens MT49 | 0.63 | IAI46_22390 | | serine endoprotease DegQ | 0.51 | IAI46_23915 | | glycerol-3-phosphate dehydrogenase | low | > 86 |
| Dickeya dianthicola ME23 | 0.63 | DZA65_RS01585 | | serine endoprotease DegQ | 0.51 | DZA65_RS20905 | | glycerol-3-phosphate dehydrogenase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.63 | HGI48_RS01520 | | serine endoprotease DegQ | 0.51 | HGI48_RS19815 | | glycerol-3-phosphate dehydrogenase | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.62 | HER17_RS19985 | | serine endoprotease DegQ | 0.52 | HER17_RS01510 | | glycerol-3-phosphate dehydrogenase | — | — |
| Alteromonas macleodii MIT1002 | 0.59 | MIT1002_00842 | | Periplasmic pH-dependent serine endoprotease DegQ precursor | 0.46 | MIT1002_00200 | | Aerobic glycerol-3-phosphate dehydrogenase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.58 | GFF2974 | | Outer membrane stress sensor protease DegQ, serine protease | 0.51 | GFF587 | | Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) | low | > 78 |
| Klebsiella michiganensis M5al | 0.58 | BWI76_RS25365 | | serine endoprotease DegQ | 0.50 | BWI76_RS26190 | | glycerol-3-phosphate dehydrogenase | low | > 92 |
| Pantoea sp. MT58 | 0.57 | IAI47_17260 | | serine endoprotease DegQ | 0.52 | IAI47_01750 | | glycerol-3-phosphate dehydrogenase | low | > 76 |
| Enterobacter sp. TBS_079 | 0.57 | MPMX20_04138 | | Periplasmic pH-dependent serine endoprotease DegQ | 0.51 | MPMX20_04309 | | Aerobic glycerol-3-phosphate dehydrogenase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.57 | EX28DRAFT_3283 | | periplasmic serine protease, Do/DeqQ family | 0.52 | EX28DRAFT_4120 | | Glycerol-3-phosphate dehydrogenase | low | > 76 |
| Escherichia coli Nissle 1917 | 0.57 | ECOLIN_RS18545 | | serine endoprotease DegQ | 0.52 | ECOLIN_RS19555 | | glycerol-3-phosphate dehydrogenase | low | > 55 |
| Escherichia coli ECOR27 | 0.57 | NOLOHH_09605 | degQ | serine endoprotease DegQ | 0.52 | NOLOHH_08720 | glpD | glycerol-3-phosphate dehydrogenase | low | > 75 |
| Escherichia coli BW25113 | 0.57 | b3234 | degQ | serine endoprotease, periplasmic (NCBI) | 0.52 | b3426 | glpD | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.57 | OHPLBJKB_00470 | | Periplasmic pH-dependent serine endoprotease DegQ | 0.52 | OHPLBJKB_00278 | | Aerobic glycerol-3-phosphate dehydrogenase | 0.53 | 37 |
| Escherichia coli ECRC62 | 0.57 | BNILDI_01930 | degQ | serine endoprotease DegQ | 0.52 | BNILDI_02795 | glpD | glycerol-3-phosphate dehydrogenase | low | > 75 |
| Escherichia coli BL21 | 0.57 | ECD_03094 | | serine endoprotease, periplasmic | 0.52 | ECD_03277 | | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding | low | > 61 |
| Escherichia fergusonii Becca | 0.57 | EFB2_00596 | | Periplasmic pH-dependent serine endoprotease DegQ | 0.52 | EFB2_00403 | | Aerobic glycerol-3-phosphate dehydrogenase | low | > 86 |
| Escherichia coli ECRC101 | 0.57 | MCAODC_08325 | degQ | serine endoprotease DegQ | 0.52 | MCAODC_07455 | glpD | glycerol-3-phosphate dehydrogenase | low | > 87 |
| Escherichia coli ECRC102 | 0.57 | NIAGMN_15565 | degQ | serine endoprotease DegQ | 0.52 | NIAGMN_14695 | glpD | glycerol-3-phosphate dehydrogenase | — | — |
| Escherichia coli ECRC99 | 0.57 | KEDOAH_10345 | degQ | serine endoprotease DegQ | 0.52 | KEDOAH_11215 | glpD | glycerol-3-phosphate dehydrogenase | — | — |
| Escherichia coli ECOR38 | 0.57 | HEPCGN_16675 | degQ | serine endoprotease DegQ | 0.52 | HEPCGN_15745 | glpD | glycerol-3-phosphate dehydrogenase | low | > 87 |
| Escherichia coli ECRC98 | 0.57 | JDDGAC_21430 | degQ | serine endoprotease DegQ | 0.52 | JDDGAC_20555 | glpD | glycerol-3-phosphate dehydrogenase | low | > 86 |
| Escherichia coli ECRC100 | 0.57 | OKFHMN_17805 | degQ | serine endoprotease DegQ | 0.52 | OKFHMN_16925 | glpD | glycerol-3-phosphate dehydrogenase | low | > 80 |
| Rahnella sp. WP5 | 0.56 | EX31_RS12475 | | Do family serine endopeptidase | 0.53 | EX31_RS05000 | | glycerol-3-phosphate dehydrogenase | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.54 | LU632_RS21355 | | Do family serine endopeptidase | 0.50 | LU632_RS23020 | glpD | glycerol-3-phosphate dehydrogenase | — | — |
| Erwinia amylovora T8 | 0.52 | OLJFJH_00660 | | serine endoprotease DegP | 0.51 | OLJFJH_04225 | | glycerol-3-phosphate dehydrogenase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.41 | ABZR86_RS17545 | | DegQ family serine endoprotease | 0.44 | ABZR86_RS20025 | | glycerol-3-phosphate dehydrogenase | low | > 74 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.38 | Xcc-8004.4948.1 | | Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain | 0.42 | Xcc-8004.471.1 | | Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.37 | LRK54_RS06430 | | Do family serine endopeptidase | 0.16 | LRK54_RS15405 | | glycerol-3-phosphate dehydrogenase/oxidase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.37 | LRK55_RS06175 | | Do family serine endopeptidase | 0.16 | LRK55_RS15125 | | glycerol-3-phosphate dehydrogenase/oxidase | low | > 63 |
| Agrobacterium fabrum C58 | 0.31 | Atu0977 | | serine protease DO-like protease | 0.42 | Atu3578 | | glycerol-3-phosphate dehydrogenase | low | > 89 |
| Rhizobium sp. OAE497 | 0.30 | ABIE40_RS20720 | | DegQ family serine endoprotease | 0.43 | ABIE40_RS24730 | | glycerol-3-phosphate dehydrogenase | low | > 107 |
| Rhodopseudomonas palustris CGA009 | 0.30 | TX73_016660 | | DegQ family serine endoprotease | 0.40 | TX73_022860 | | glycerol-3-phosphate dehydrogenase | low | > 86 |
| Rhodospirillum rubrum S1H | 0.30 | Rru_A2662 | | Peptidase S1C, Do (NCBI) | 0.16 | Rru_A1508 | | FAD dependent oxidoreductase (NCBI) | low | > 58 |
| Sinorhizobium meliloti 1021 | 0.29 | SMc02365 | | protease precursor protein | 0.44 | SMc01620 | | glycerol-3-phosphate dehydrogenase | low | > 103 |
| Xanthobacter sp. DMC5 | 0.29 | GFF3126 | | Periplasmic serine endoprotease DegP | 0.44 | GFF4169 | | D-erythritol 1-phosphate dehydrogenase | — | — |
| Pseudomonas aeruginosa PA14 | 0.29 | IKLFDK_03285 | | serine protease MucD | 0.53 | IKLFDK_18300 | | glycerol-3-phosphate dehydrogenase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.29 | Dshi_2733 | | protease Do (RefSeq) | 0.40 | Dshi_0630 | | FAD dependent oxidoreductase (RefSeq) | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.29 | PFLU_RS07245 | | DegQ family serine endoprotease | 0.52 | PFLU_RS05650 | | glycerol-3-phosphate dehydrogenase | — | — |
| Pseudomonas fluorescens SBW25 | 0.29 | PFLU_RS07245 | | DegQ family serine endoprotease | 0.52 | PFLU_RS05650 | | glycerol-3-phosphate dehydrogenase | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.28 | PfGW456L13_4513 | | HtrA protease/chaperone protein | 0.54 | PfGW456L13_1732 | | Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) | — | — |
| Bosea sp. OAE506 | 0.28 | ABIE41_RS12865 | | DegQ family serine endoprotease | 0.41 | ABIE41_RS14410 | | glycerol-3-phosphate dehydrogenase | low | > 77 |
| Pseudomonas fluorescens FW300-N2E3 | 0.28 | AO353_17640 | | serine peptidase | 0.54 | AO353_04190 | | glycerol-3-phosphate dehydrogenase | low | > 101 |
| Herbaspirillum seropedicae SmR1 | 0.28 | HSERO_RS21975 | | peptidase | 0.43 | HSERO_RS04840 | | glycerol-3-phosphate dehydrogenase | — | — |
| Marinobacter adhaerens HP15 | 0.28 | HP15_779 | | serine protease MucD precursor | 0.48 | HP15_2168 | | FAD dependent oxidoreductase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.28 | Pf1N1B4_3326 | | HtrA protease/chaperone protein | 0.54 | Pf1N1B4_769 | | Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) | — | — |
| Pseudomonas stutzeri RCH2 | 0.28 | Psest_3096 | | periplasmic serine protease, Do/DeqQ family | 0.53 | Psest_2775 | | Glycerol-3-phosphate dehydrogenase | — | — |
| Pseudomonas sp. DMC3 | 0.28 | GFF2280 | | Periplasmic serine endoprotease DegP | 0.54 | GFF5109 | | Aerobic glycerol-3-phosphate dehydrogenase | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.28 | DVU1468 | htrA | peptidase/PDZ domain protein (TIGR) | 0.17 | DVU3132 | | glycerol-3-phosphate dehydrogenase, FAD-dependent (TIGR) | low | > 55 |
| Pseudomonas sp. SVBP6 | 0.28 | COO64_RS16540 | | DegQ family serine endoprotease | 0.55 | COO64_RS16790 | glpD | glycerol-3-phosphate dehydrogenase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.28 | AO356_04560 | | serine peptidase | 0.53 | AO356_18235 | | glycerol-3-phosphate dehydrogenase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.28 | Pf6N2E2_2753 | | HtrA protease/chaperone protein | 0.53 | Pf6N2E2_5572 | | Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) | — | — |
| Pseudomonas simiae WCS417 | 0.28 | PS417_07135 | | serine peptidase | 0.53 | PS417_05565 | | glycerol-3-phosphate dehydrogenase | — | — |
| Pseudomonas putida KT2440 | 0.28 | PP_1430 | | putative periplasmic serine endoprotease DegP-like | 0.53 | PP_1073 | | glycerol-3-phosphate dehydrogenase (aerobic) | — | — |
| Pseudomonas sp. BP01 | 0.28 | JOY50_RS14680 | | DegQ family serine endoprotease | 0.53 | JOY50_RS14860 | glpD | glycerol-3-phosphate dehydrogenase | low | > 84 |
| Phaeobacter inhibens DSM 17395 | 0.27 | PGA1_c23690 | | protease do | 0.41 | PGA1_c08240 | | aerobic glycerol-3-phosphate dehydrogenase GlpD | — | — |
| Pseudomonas sp. S08-1 | 0.27 | OH686_20060 | | HtrA protease/chaperone protein | 0.53 | OH686_20360 | | Aerobic glycerol-3-phosphate dehydrogenase | — | — |
Not shown: 24 genomes with orthologs for CSW01_03020 only; 21 genomes with orthologs for CSW01_17495 only