Conservation of cofitness between CSW01_09560 and CSW01_15330 in Vibrio cholerae E7946 ATCC 55056

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09560 orotidine-5'-phosphate decarboxylase 1.0 CSW01_15330 glycine dehydrogenase (decarboxylating) 0.55 19
Klebsiella michiganensis M5al 0.69 BWI76_RS11965 orotidine-5'-phosphate decarboxylase 0.59 BWI76_RS23870 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) low > 92
Escherichia coli BW25113 0.69 b1281 pyrF orotidine 5'-phosphate decarboxylase (NCBI) 0.59 b2903 gcvP glycine dehydrogenase (NCBI) low > 76
Klebsiella pneumoniae MRSN742743 0.68 GJGHJB_02924 pyrF orotidine-5'-phosphate decarboxylase 0.59 GJGHJB_00769 gcvP aminomethyl-transferring glycine dehydrogenase low > 83
Escherichia coli ECRC102 0.68 NIAGMN_26720 pyrF orotidine-5'-phosphate decarboxylase 0.59 NIAGMN_17295 gcvP aminomethyl-transferring glycine dehydrogenase low > 80
Escherichia coli ECRC101 0.68 MCAODC_15715 pyrF orotidine-5'-phosphate decarboxylase 0.59 MCAODC_10050 gcvP aminomethyl-transferring glycine dehydrogenase low > 87
Escherichia coli ECRC100 0.68 OKFHMN_02550 pyrF orotidine-5'-phosphate decarboxylase 0.59 OKFHMN_19530 gcvP aminomethyl-transferring glycine dehydrogenase low > 79
Escherichia coli ECRC99 0.68 KEDOAH_26215 pyrF orotidine-5'-phosphate decarboxylase 0.59 KEDOAH_08610 gcvP aminomethyl-transferring glycine dehydrogenase — —
Escherichia coli ECOR38 0.68 HEPCGN_25650 pyrF orotidine-5'-phosphate decarboxylase 0.59 HEPCGN_18820 gcvP aminomethyl-transferring glycine dehydrogenase low > 88
Klebsiella pneumoniae MKP103 0.68 KDGMDA_19655 orotidine-5'-phosphate decarboxylase 0.59 KDGMDA_04370 aminomethyl-transferring glycine dehydrogenase low > 94
Escherichia coli ECRC98 0.68 JDDGAC_05095 pyrF orotidine-5'-phosphate decarboxylase 0.59 JDDGAC_23170 gcvP aminomethyl-transferring glycine dehydrogenase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_02401 'Orotidine 5'-phosphate decarboxylase' transl_table=11 0.59 OHPLBJKB_00812 Glycine dehydrogenase (decarboxylating) low > 74
Escherichia coli ECOR27 0.68 NOLOHH_20215 pyrF orotidine-5'-phosphate decarboxylase 0.59 NOLOHH_11445 gcvP aminomethyl-transferring glycine dehydrogenase low > 75
Escherichia coli ECRC62 0.68 BNILDI_18365 pyrF orotidine-5'-phosphate decarboxylase 0.59 BNILDI_09980 gcvP aminomethyl-transferring glycine dehydrogenase low > 75
Escherichia coli BL21 0.68 ECD_01258 orotidine-5'-phosphate decarboxylase 0.59 ECD_02735 glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex low > 61
Escherichia fergusonii Becca 0.68 EFB2_02644 Orotidine 5'-phosphate decarboxylase 0.59 EFB2_00999 Glycine dehydrogenase (decarboxylating) low > 86
Enterobacter sp. TBS_079 0.68 MPMX20_02494 Orotidine 5'-phosphate decarboxylase 0.59 MPMX20_03762 Glycine dehydrogenase (decarboxylating) low > 85
Enterobacter asburiae PDN3 0.67 EX28DRAFT_0954 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) 0.59 EX28DRAFT_2955 glycine dehydrogenase (decarboxylating) — —
Serratia liquefaciens MT49 0.67 IAI46_13915 orotidine-5'-phosphate decarboxylase 0.58 IAI46_20850 aminomethyl-transferring glycine dehydrogenase low > 87
Shewanella loihica PV-4 0.66 Shew_1958 orotidine 5'-phosphate decarboxylase (RefSeq) 0.59 Shew_3062 glycine dehydrogenase (RefSeq) — —
Pectobacterium carotovorum WPP14 0.65 HER17_RS09390 orotidine-5'-phosphate decarboxylase 0.58 HER17_RS17995 aminomethyl-transferring glycine dehydrogenase low > 75
Shewanella amazonensis SB2B 0.65 Sama_1740 orotidine 5'-phosphate decarboxylase (RefSeq) 0.58 Sama_2719 glycine dehydrogenase (RefSeq) low > 62
Rahnella sp. WP5 0.64 EX31_RS09855 orotidine-5'-phosphate decarboxylase 0.58 EX31_RS21520 aminomethyl-transferring glycine dehydrogenase low > 89
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13516_RS09410 pyrF orotidine-5'-phosphate decarboxylase 0.59 PagCFBP13516_RS04005 gcvP aminomethyl-transferring glycine dehydrogenase low > 80
Escherichia coli Nissle 1917 0.64 ECOLIN_RS07730 orotidine-5'-phosphate decarboxylase 0.59 ECOLIN_RS16165 aminomethyl-transferring glycine dehydrogenase — —
Shewanella sp. ANA-3 0.64 Shewana3_1981 orotidine 5'-phosphate decarboxylase (RefSeq) 0.58 Shewana3_3499 glycine dehydrogenase (RefSeq) low > 73
Dickeya dianthicola 67-19 0.64 HGI48_RS12580 orotidine-5'-phosphate decarboxylase 0.58 HGI48_RS03400 aminomethyl-transferring glycine dehydrogenase low > 71
Dickeya dadantii 3937 0.64 DDA3937_RS12525 orotidine-5'-phosphate decarboxylase 0.58 DDA3937_RS03255 aminomethyl-transferring glycine dehydrogenase low > 74
Shewanella oneidensis MR-1 0.64 SO2398 pyrF orotidine 5`-phosphate decarboxylase (NCBI ptt file) 0.58 SO0781 gcvP glycine cleavage system P protein (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.63 DZA65_RS13030 orotidine-5'-phosphate decarboxylase 0.58 DZA65_RS03445 aminomethyl-transferring glycine dehydrogenase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF2704 'Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)' transl_table=11 0.59 GFF3003 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) low > 78
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_2331 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) 0.59 B158DRAFT_0545 glycine dehydrogenase (decarboxylating) — —
Pantoea sp. MT58 0.63 IAI47_09275 orotidine-5'-phosphate decarboxylase 0.59 IAI47_03775 aminomethyl-transferring glycine dehydrogenase low > 76
Erwinia amylovora T8 0.63 OLJFJH_13570 orotidine-5'-phosphate decarboxylase 0.59 OLJFJH_08785 aminomethyl-transferring glycine dehydrogenase 0.64 21
Erwinia tracheiphila SCR3 0.62 LU632_RS12500 pyrF orotidine-5'-phosphate decarboxylase 0.58 LU632_RS05915 gcvP aminomethyl-transferring glycine dehydrogenase low > 73
Alteromonas macleodii MIT1002 0.62 MIT1002_02184 Orotidine 5'-phosphate decarboxylase 0.63 MIT1002_02971 Glycine dehydrogenase [decarboxylating] low > 70
Pseudomonas segetis P6 0.62 ACVTMO_RS09450 pyrF orotidine-5'-phosphate decarboxylase 0.59 ACVTMO_RS22225 gcvP aminomethyl-transferring glycine dehydrogenase — —
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_23775 pyrF orotidine-5'-phosphate decarboxylase 0.58 IJEDHG_03250 gcvP aminomethyl-transferring glycine dehydrogenase low > 61
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_01670 orotidine 5'-phosphate decarboxylase 0.58 AO353_08720 glycine dehydrogenase — —
Pseudomonas fluorescens SBW25 0.58 PFLU_RS09110 orotidine-5'-phosphate decarboxylase 0.57 PFLU_RS24000 aminomethyl-transferring glycine dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS09110 orotidine-5'-phosphate decarboxylase 0.57 PFLU_RS24000 aminomethyl-transferring glycine dehydrogenase — —
Pseudomonas aeruginosa MRSN321 0.58 PFGADD_02097 pyrF orotidine-5'-phosphate decarboxylase 0.57 PFGADD_05461 gcvP aminomethyl-transferring glycine dehydrogenase low > 99
Pseudomonas protegens RBAN4 0.58 FABNJH_09095 pyrF orotidine-5'-phosphate decarboxylase 0.57 FABNJH_30045 gcvP aminomethyl-transferring glycine dehydrogenase — —
Pseudomonas aeruginosa PUPa3 0.58 NPBIFN_02136 pyrF orotidine-5'-phosphate decarboxylase 0.57 NPBIFN_05537 gcvP aminomethyl-transferring glycine dehydrogenase — —
Pseudomonas aeruginosa PA14 0.58 IKLFDK_14615 orotidine-5'-phosphate decarboxylase 0.57 IKLFDK_27405 aminomethyl-transferring glycine dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_2056 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.58 PfGW456L13_904 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) — —
Pseudomonas stutzeri RCH2 0.57 Psest_1714 orotidine 5'-phosphate decarboxylase, subfamily 1 0.60 Psest_0183 glycine dehydrogenase (decarboxylating) — —
Pseudomonas sp. RS175 0.57 PFR28_03064 'Orotidine 5'-phosphate decarboxylase' transl_table=11 0.56 PFR28_03383 Glycine dehydrogenase (decarboxylating) — —
Pseudomonas simiae WCS417 0.56 PS417_09055 orotidine 5'-phosphate decarboxylase 0.57 PS417_22360 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) — —
Pseudomonas sp. BP01 0.56 JOY50_RS15880 pyrF orotidine-5'-phosphate decarboxylase 0.59 JOY50_RS22405 gcvP aminomethyl-transferring glycine dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_5887 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.56 Pf6N2E2_5558 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) — —
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_19850 orotidine 5'-phosphate decarboxylase 0.56 AO356_18170 glycine dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1836 orotidine-5'-phosphate decarboxylase 0.56 Psyr_1096 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit — —
Pseudomonas lactucae CFBP13502 0.56 GEMAOFIL_01940 'Orotidine 5'-phosphate decarboxylase' transl_table=11 0.57 GEMAOFIL_04608 Glycine dehydrogenase (decarboxylating) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1836 orotidine-5'-phosphate decarboxylase 0.56 Psyr_1096 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit — —
Pseudomonas orientalis W4I3 0.56 QF045_RS11745 orotidine-5'-phosphate decarboxylase 0.57 QF045_RS24485 aminomethyl-transferring glycine dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_514 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.59 Pf1N1B4_2236 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) — —
Pseudomonas sp. DMC3 0.55 GFF4798 Orotidine 5'-phosphate decarboxylase 0.58 GFF308 Glycine dehydrogenase (decarboxylating) — —
Pseudomonas sp. SVBP6 0.55 COO64_RS06575 pyrF orotidine-5'-phosphate decarboxylase 0.58 COO64_RS00950 gcvP aminomethyl-transferring glycine dehydrogenase low > 91
Pseudomonas sp. S08-1 0.55 OH686_00580 Orotidine 5'-phosphate decarboxylase 0.60 OH686_11165 glycine dehydrogenase low > 80
Pseudomonas putida KT2440 0.54 PP_1815 Orotidine 5'-phosphate decarboxylase 0.58 PP_5192 glycine dehydrogenase — —
Synechocystis sp000284455 PCC 6803 0.38 SGL_RS08270 orotidine-5'-phosphate decarboxylase 0.55 SGL_RS11955 aminomethyl-transferring glycine dehydrogenase — —
Sinorhizobium meliloti 1021 0.34 SMc00412 orotidine 5'-phosphate decarboxylase 0.55 SMc02049 glycine dehydrogenase low > 103
Rhizobium sp. OAE497 0.33 ABIE40_RS01345 orotidine-5'-phosphate decarboxylase 0.54 ABIE40_RS09950 aminomethyl-transferring glycine dehydrogenase — —
Agrobacterium fabrum C58 0.33 Atu0298 orotidine 5 0.54 Atu1462 glycine cleavage system protein P2 0.73 57
Synechococcus elongatus PCC 7942 0.32 Synpcc7942_2569 pyrF orotidine 5'-phosphate decarboxylase 0.53 Synpcc7942_2047 gcvP glycine dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.32 TX73_001750 orotidine-5'-phosphate decarboxylase 0.57 TX73_019935 aminomethyl-transferring glycine dehydrogenase — —
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.5259.1 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.55 Xcc-8004.3878.1 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) — —
Phaeobacter inhibens DSM 17395 0.25 PGA1_c32450 orotidine 5'-phosphate decarboxylase PyrF 0.56 PGA1_78p00310 glycine dehydrogenase — —

Not shown: 17 genomes with orthologs for CSW01_09560 only; 35 genomes with orthologs for CSW01_15330 only