Conservation of cofitness between CSW01_05370 and CSW01_14585 in Vibrio cholerae E7946 ATCC 55056

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05370 YbaB/EbfC family nucleoid-associated protein 1.0 CSW01_14585 type VI secretion system baseplate subunit TssK 0.54 10
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_03203 Nucleoid-associated protein YbaB 0.43 OHPLBJKB_03434 hypothetical protein — —
Escherichia coli ECRC100 0.88 OKFHMN_08160 ybaB YbaB/EbfC family nucleoid-associated protein 0.42 OKFHMN_09890 tssK type VI secretion system baseplate subunit TssK — —
Escherichia coli ECRC98 0.88 JDDGAC_11810 ybaB YbaB/EbfC family nucleoid-associated protein 0.42 JDDGAC_13490 tssK type VI secretion system baseplate subunit TssK — —
Escherichia coli ECOR27 0.88 NOLOHH_01090 ybaB YbaB/EbfC family nucleoid-associated protein 0.42 NOLOHH_02250 tssK type VI secretion system baseplate subunit TssK — —
Escherichia coli ECRC102 0.88 NIAGMN_06215 ybaB YbaB/EbfC family nucleoid-associated protein 0.42 NIAGMN_07740 tssK type VI secretion system baseplate subunit TssK — —
Escherichia fergusonii Becca 0.88 EFB2_03587 Nucleoid-associated protein YbaB 0.41 EFB2_03818 hypothetical protein low > 86
Escherichia coli ECRC101 0.88 MCAODC_27385 ybaB YbaB/EbfC family nucleoid-associated protein 0.42 MCAODC_00410 tssK type VI secretion system baseplate subunit TssK low > 87
Escherichia coli Nissle 1917 0.88 ECOLIN_RS02800 YbaB/EbfC family nucleoid-associated protein 0.14 ECOLIN_RS15705 type VI secretion system baseplate subunit TssK — —
Escherichia coli ECRC99 0.88 KEDOAH_19805 ybaB YbaB/EbfC family nucleoid-associated protein 0.42 KEDOAH_18260 tssK type VI secretion system baseplate subunit TssK — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF4389 FIG000557: hypothetical protein co-occurring with RecR 0.29 GFF4064 Uncharacterized protein ImpJ/VasE — —
Klebsiella pneumoniae MKP103 0.86 KDGMDA_14885 YbaB/EbfC family nucleoid-associated protein 0.19 KDGMDA_20360 type VI secretion system baseplate subunit TssK — —
Rahnella sp. WP5 0.85 EX31_RS22520 YbaB/EbfC family nucleoid-associated protein 0.16 EX31_RS01860 type VI secretion system baseplate subunit TssK — —
Dickeya dianthicola ME23 0.85 DZA65_RS06160 YbaB/EbfC family nucleoid-associated protein 0.58 DZA65_RS08575 type VI secretion system baseplate subunit TssK — —
Dickeya dianthicola 67-19 0.85 HGI48_RS05835 YbaB/EbfC family nucleoid-associated protein 0.58 HGI48_RS07980 type VI secretion system baseplate subunit TssK — —
Dickeya dadantii 3937 0.85 DDA3937_RS05785 YbaB/EbfC family nucleoid-associated protein 0.58 DDA3937_RS07050 type VI secretion system baseplate subunit TssK — —
Pantoea sp. MT58 0.83 IAI47_14470 YbaB/EbfC family nucleoid-associated protein 0.32 IAI47_11690 type VI secretion system baseplate subunit TssK low > 76
Pantoea agglomerans CFBP13505 P0401 0.82 PagCFBP13505_RS10725 YbaB/EbfC family nucleoid-associated protein 0.32 PagCFBP13505_RS19720 type VI secretion system baseplate subunit TssK — —
Erwinia tracheiphila HP pepo 2.2 0.82 IJEDHG_16640 ybaB YbaB/EbfC family nucleoid-associated protein 0.33 IJEDHG_05085 tssK type VI secretion system baseplate subunit TssK — —
Erwinia tracheiphila SCR3 0.82 LU632_RS18110 YbaB/EbfC family nucleoid-associated protein 0.46 LU632_RS17695 tssK type VI secretion system baseplate subunit TssK — —
Erwinia amylovora T8 0.81 OLJFJH_17810 YbaB/EbfC family nucleoid-associated protein 0.33 OLJFJH_01895 type VI secretion system baseplate subunit TssK low > 58
Enterobacter asburiae PDN3 0.79 EX28DRAFT_2486 DNA-binding protein, YbaB/EbfC family 0.33 EX28DRAFT_0788 type VI secretion protein, VC_A0114 family — —
Enterobacter sp. TBS_079 0.78 MPMX20_01073 Nucleoid-associated protein YbaB 0.33 MPMX20_02680 hypothetical protein low > 85
Pectobacterium carotovorum WPP14 0.75 HER17_RS15700 YbaB/EbfC family nucleoid-associated protein 0.59 HER17_RS04875 type VI secretion system baseplate subunit TssK — —
Serratia liquefaciens MT49 0.73 IAI46_05235 YbaB/EbfC family nucleoid-associated protein 0.13 IAI46_05585 type VI secretion system baseplate subunit TssK — —
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_1826 Conserved hypothetical protein 103 0.19 Psyr_4960 protein of unknown function DUF876 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_1826 Conserved hypothetical protein 103 0.19 Psyr_4960 protein of unknown function DUF876 — —
Pseudomonas aeruginosa MRSN321 0.72 DY961_RS19290 YbaB/EbfC family nucleoid-associated protein 0.42 DY961_RS26660 tssK;go_function=molecular_function|0003674||IEA;go_process=protein type VI secretion system baseplate subunit TssK — —
Pseudomonas aeruginosa PUPa3 0.72 DQ20_RS53420 YbaB/EbfC family nucleoid-associated protein 0.42 DQ20_RS31230 tssK;go_function=molecular_function|0003674||IEA;go_process=protein type VI secretion system baseplate subunit TssK — —
Pseudomonas aeruginosa PA14 0.72 IKLFDK_07320 YbaB/EbfC family nucleoid-associated protein 0.42 IKLFDK_25155 type VI secretion system hcp secretion island protein HsiJ1 — —
Pseudomonas sp. S08-1 0.72 OH686_02390 DNA-binding protein, YbaB/EbfC family 0.35 OH686_12790 T6SS component TssK (ImpJ/VasE) — —
Pseudomonas putida KT2440 0.71 PP_4268 nucleoid-associated broad specificity regulator 0.48 PP_2617 conserved protein of unknown function low > 96
Pseudomonas stutzeri RCH2 0.71 Psest_2546 DNA-binding protein, YbaB/EbfC family 0.36 Psest_4244 type VI secretion protein, VC_A0114 family — —
Pseudomonas sp. BP01 0.71 JOY50_RS00140 YbaB/EbfC family nucleoid-associated protein 0.19 JOY50_RS19880 tssK type VI secretion system baseplate subunit TssK low > 84
Pseudomonas segetis P6 0.70 MPMX49_02229 Nucleoid-associated protein YbaB 0.33 MPMX49_00142 hypothetical protein — —
Pseudomonas sp. SVBP6 0.70 COO64_RS18600 YbaB/EbfC family nucleoid-associated protein 0.41 COO64_RS00430 tssK type VI secretion system baseplate subunit TssK — —
Marinobacter adhaerens HP15 0.66 HP15_1884 protein belonging to uncharacterized protein family UPF0133 0.66 HP15_3469 protein containing DUF876, bacterial — —
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS22290 YbaB/EbfC family nucleoid-associated protein 0.29 QEN71_RS34525 type VI secretion system baseplate subunit TssK — —
Paraburkholderia graminis OAS925 0.65 ABIE53_002047 DNA-binding YbaB/EbfC family protein 0.39 ABIE53_003927 type VI secretion system protein ImpJ — —
Pseudomonas orientalis W4I3 0.65 QF045_RS22615 YbaB/EbfC family nucleoid-associated protein 0.41 QF045_RS02285 type VI secretion system baseplate subunit TssK — —
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS09060 hypothetical protein 0.29 BPHYT_RS04550 type VI secretion protein — —
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_00833 hypothetical protein 0.18 H281DRAFT_05360 type VI secretion system protein ImpJ — —
Pseudomonas sp. RS175 0.65 PFR28_01075 Nucleoid-associated protein YbaB 0.42 PFR28_04452 hypothetical protein — —
Variovorax sp. OAS795 0.64 ABID97_RS14695 YbaB/EbfC family nucleoid-associated protein 0.36 ABID97_RS04985 type VI secretion system baseplate subunit TssK — —
Variovorax sp. SCN45 0.64 GFF1109 Nucleoid-associated protein YaaK 0.37 GFF6224 T6SS component TssK (ImpJ/VasE) — —
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_2327 FIG000557: hypothetical protein co-occurring with RecR 0.42 Pf6N2E2_4339 Uncharacterized protein ImpJ/VasE — —
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_02505 nucleoid-associated protein 0.43 AO356_12305 type VI secretion protein — —
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS18365 hypothetical protein 0.19 HSERO_RS20195 type VI secretion protein low > 78
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_3863 FIG000557: hypothetical protein co-occurring with RecR 0.42 Pf1N1B4_2068 Uncharacterized protein ImpJ/VasE — —
Pseudomonas lactucae CFBP13502 0.63 GEMAOFIL_04306 Nucleoid-associated protein YbaB 0.41 GEMAOFIL_00054 hypothetical protein — —
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_00680 nucleoid-associated protein 0.42 AO353_09555 type VI secretion protein — —
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS22425 YbaB/EbfC family nucleoid-associated protein 0.42 PFLU_RS29610 type VI secretion system baseplate subunit TssK — —
Pseudomonas simiae WCS417 0.63 PS417_20810 hypothetical protein 0.42 PS417_27930 type VI secretion protein — —
Pseudomonas fluorescens SBW25 0.63 PFLU_RS22425 YbaB/EbfC family nucleoid-associated protein 0.42 PFLU_RS29610 type VI secretion system baseplate subunit TssK low > 109
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS13280 hypothetical protein 0.32 RR42_RS03575 type VI secretion protein — —
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS06240 YbaB/EbfC family nucleoid-associated protein 0.07 ABZR86_RS04900 type VI secretion system baseplate subunit TssK — —
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS15160 nucleoid-associated protein, YbaB/EbfC family 0.19 RALBFv3_RS20070 type VI secretion system baseplate subunit TssK — —
Ralstonia solanacearum UW163 0.57 UW163_RS12630 nucleoid-associated protein, YbaB/EbfC family 0.19 UW163_RS19105 type VI secretion system baseplate subunit TssK — —
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS10800 YbaB/EbfC family nucleoid-associated protein 0.32 ABZR87_RS13875 type VI secretion system baseplate subunit TssK low > 80
Ralstonia solanacearum GMI1000 0.57 RS_RS05975 YbaB/EbfC family nucleoid-associated protein 0.18 RS_RS20655 type VI secretion system baseplate subunit TssK — —
Ralstonia solanacearum PSI07 0.57 RPSI07_RS18215 YbaB/EbfC family nucleoid-associated protein 0.19 RPSI07_RS02905 type VI secretion system baseplate subunit TssK — —
Pseudomonas sp. DMC3 0.54 GFF706 Nucleoid-associated protein YbaB 0.36 GFF447 hypothetical protein low > 89
Acinetobacter radioresistens SK82 0.46 MPMX26_01644 Nucleoid-associated protein YbaB 0.17 MPMX26_00958 hypothetical protein low > 36
Acinetobacter baumannii LAC-4 0.45 RR41_RS12655 YbaB/EbfC family nucleoid-associated protein 0.18 RR41_RS10710 type VI secretion system baseplate subunit TssK low > 55
Agrobacterium fabrum C58 0.44 Atu0095 hypothetical protein 0.36 Atu4334 hypothetical protein low > 89
Bosea sp. OAE506 0.44 ABIE41_RS04030 YbaB/EbfC family nucleoid-associated protein 0.31 ABIE41_RS14310 type VI secretion system baseplate subunit TssK — —
Azospirillum brasilense Sp245 0.40 AZOBR_RS03875 hypothetical protein 0.07 AZOBR_RS21310 hypothetical protein — —

Not shown: 43 genomes with orthologs for CSW01_05370 only; 0 genomes with orthologs for CSW01_14585 only