Conservation of cofitness between CSW01_01040 and CSW01_14465 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01040 protein RarD 1.0 CSW01_14465 EamA/RhaT family transporter 0.70 8
Klebsiella pneumoniae MKP103 0.61 KDGMDA_09720 EamA family transporter RarD 0.23 KDGMDA_19580 EamA family transporter low > 95
Serratia liquefaciens MT49 0.61 IAI46_00755 EamA family transporter RarD 0.11 IAI46_18140 DMT family transporter low > 87
Rahnella sp. WP5 0.59 EX31_RS15195 EamA family transporter RarD 0.24 EX31_RS01385 EamA family transporter low > 89
Pantoea sp. MT58 0.57 IAI47_18375 EamA family transporter RarD 0.10 IAI47_13355 DMT family transporter low > 76
Shewanella amazonensis SB2B 0.57 Sama_0332 rarD protein (RefSeq) 0.37 Sama_1099 hypothetical protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.52 MIT1002_00151 putative chloramphenical resistance permease RarD 0.32 MIT1002_03901 putative DMT superfamily transporter inner membrane protein low > 70
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_2480 Protein rarD 0.25 Pf1N1B4_3386 Permease of the drug/metabolite transporter (DMT) superfamily low > 87
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_07550 chloramphenical resistance permease RarD 0.26 AO353_18215 multidrug DMT transporter permease low > 101
Pseudomonas simiae WCS417 0.42 PS417_26030 chloramphenical resistance permease RarD 0.26 PS417_20590 multidrug DMT transporter permease low > 88
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS27675 EamA family transporter RarD 0.27 PFLU_RS22300 EamA family transporter low > 109
Pseudomonas fluorescens SBW25 0.42 PFLU_RS27675 EamA family transporter RarD 0.27 PFLU_RS22300 EamA family transporter low > 109
Pseudomonas sp. DMC3 0.42 GFF81 Protein RarD 0.26 GFF2339 IS1595 family transposase ISBsp7 low > 89
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_4754 Protein rarD 0.27 Pf6N2E2_2697 Permease of the drug/metabolite transporter (DMT) superfamily low > 103
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1142 Protein rarD 0.26 PfGW456L13_4469 Permease of the drug/metabolite transporter (DMT) superfamily low > 87
Pseudomonas stutzeri RCH2 0.42 Psest_0356 rarD protein 0.23 Psest_1856 Permeases of the drug/metabolite transporter (DMT) superfamily low > 67
Pseudomonas sp. RS175 0.42 PFR28_04108 Protein RarD 0.26 PFR28_00737 hypothetical protein 0.51 1
Pseudomonas sp. BP01 0.42 JOY50_RS17910 rarD EamA family transporter RarD 0.24 JOY50_RS01400 DMT family transporter 0.30 54
Pseudomonas putida KT2440 0.42 PP_0358 conserved membrane protein of unknown function 0.23 PP_4566 putative drug/metabolite transporter low > 96
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_14110 Putative D-serine transporter (from data) 0.27 AO356_04290 multidrug DMT transporter permease 0.27 56
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS20410 transporter 0.22 RR42_RS37285 multidrug DMT transporter permease low > 128
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS26035 EamA family transporter RarD 0.31 QEN71_RS05460 DMT family transporter low > 153
Desulfovibrio vulgaris Miyazaki F 0.40 DvMF_2967 RarD protein, DMT superfamily transporter (RefSeq) 0.23 DvMF_1949 protein of unknown function DUF6 transmembrane (RefSeq) low > 51
Pseudomonas lactucae CFBP13502 0.39 GEMAOFIL_05327 Protein RarD 0.25 GEMAOFIL_04268 IS1595 family transposase ISBsp7 low > 96
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_0490 rarD protein 0.11 B158DRAFT_1668 Predicted permease, DMT superfamily low > 40
Pseudomonas sp. SVBP6 0.38 COO64_RS22750 rarD EamA family transporter RarD 0.26 COO64_RS22150 DMT family transporter low > 93
Phaeobacter inhibens DSM 17395 0.37 PGA1_c33100 protein RarD 0.15 PGA1_c00690 putative integral membrane protein low > 62
Ralstonia solanacearum GMI1000 0.37 RS_RS02855 EamA family transporter RarD 0.31 RS_RS12570 EamA/RhaT family transporter low > 80
Magnetospirillum magneticum AMB-1 0.36 AMB_RS06360 EamA family transporter RarD 0.10 AMB_RS14120 EamA family transporter low > 64
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS08060 EamA family transporter RarD 0.36 ABZR87_RS00570 DMT family transporter low > 80
Pseudomonas orientalis W4I3 0.36 QF045_RS00440 EamA family transporter RarD 0.28 QF045_RS22495 DMT family transporter low > 93
Pseudomonas sp. S08-1 0.36 OH686_10385 Uncharacterized inner membrane protein RarD 0.20 OH686_05210 Permease of the drug/metabolite transporter (DMT) superfamily low > 80
Lysobacter sp. OAE881 0.35 ABIE51_RS03205 EamA family transporter RarD 0.25 ABIE51_RS14840 DMT family transporter low > 62
Sinorhizobium meliloti 1021 0.35 SMc02545 hypothetical protein 0.16 SMc01844 hypothetical protein low > 103
Azospirillum sp. SherDot2 0.35 MPMX19_00476 Protein RarD 0.14 MPMX19_01772 putative inner membrane transporter YedA low > 112
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS12170 EamA family transporter RarD 0.35 RALBFv3_RS04950 EamA/RhaT family transporter low > 76
Ralstonia solanacearum UW163 0.35 UW163_RS01440 EamA family transporter RarD 0.35 UW163_RS08675 EamA/RhaT family transporter — —
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS23555 membrane protein 0.25 HSERO_RS22835 multidrug DMT transporter permease low > 78
Rhizobium sp. OAE497 0.34 ABIE40_RS06215 EamA family transporter RarD 0.18 ABIE40_RS01620 DMT family transporter low > 107
Acidovorax sp. GW101-3H11 0.34 Ac3H11_4000 RarD protein, DMT superfamily transporter 0.28 Ac3H11_2212 Permease of the drug/metabolite transporter (DMT) superfamily low > 79
Agrobacterium fabrum C58 0.33 Atu1068 hypothetical protein 0.19 Atu3521 permease low > 89
Ralstonia solanacearum PSI07 0.32 RPSI07_RS21160 EamA family transporter RarD 0.33 RPSI07_RS12340 EamA/RhaT family transporter low > 81
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.4969.1 RarD protein, chloamphenicol sensitive 0.23 Xcc-8004.1861.1 Permease of the drug/metabolite transporter (DMT) superfamily low > 74
Rhodospirillum rubrum S1H 0.31 Rru_A0706 RarD protein (NCBI) 0.13 Rru_A0388 Protein of unknown function DUF6, transmembrane (NCBI) low > 58
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS34860 chemotaxis protein 0.31 BPHYT_RS13240 multidrug DMT transporter permease low > 109
Paraburkholderia bryophila 376MFSha3.1 0.18 H281DRAFT_03622 chloramphenicol-sensitive protein RarD 0.31 H281DRAFT_00391 Threonine/homoserine efflux transporter RhtA low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF1172 Chloramphenicol-sensitive protein rarD 0.21 GFF5227 Permease of the drug/metabolite transporter (DMT) superfamily low > 90
Paraburkholderia graminis OAS925 0.16 ABIE53_004634 chloramphenicol-sensitive protein RarD 0.30 ABIE53_002861 drug/metabolite transporter (DMT)-like permease low > 113

Not shown: 46 genomes with orthologs for CSW01_01040 only; 14 genomes with orthologs for CSW01_14465 only