Conservation of cofitness between CSW01_11795 and CSW01_13360 in Vibrio cholerae E7946 ATCC 55056

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11795 LysR family transcriptional regulator 1.0 CSW01_13360 argininosuccinate lyase 0.60 4
Shewanella loihica PV-4 0.68 Shew_2531 LysR family transcriptional regulator (RefSeq) 0.63 Shew_0206 argininosuccinate lyase (RefSeq) low > 60
Pseudomonas sp. SVBP6 0.37 COO64_RS19970 LysR family transcriptional regulator 0.45 COO64_RS01210 argH argininosuccinate lyase 0.51 5
Pseudomonas protegens RBAN4 0.37 FABNJH_06490 lysR DNA-binding transcriptional regulator, LysR family 0.45 FABNJH_30285 argH argininosuccinate lyase — —
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_16845 LysR family transcriptional regulator 0.45 AO353_09000 argininosuccinate lyase low > 101
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_1386 transcriptional regulator, LysR family 0.46 Psyr_0065 argininosuccinate lyase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_1386 transcriptional regulator, LysR family 0.46 Psyr_0065 argininosuccinate lyase — —
Pseudomonas sp. DMC3 0.36 GFF2119 HTH-type transcriptional activator CmpR 0.45 GFF359 Argininosuccinate lyase low > 89
Pseudomonas sp. BP01 0.36 JOY50_RS23820 finR LysR family transcriptional regulator FinR 0.45 JOY50_RS18760 argH argininosuccinate lyase — —
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_3152 LysR family transcriptional regulator PA3398 0.45 Pf1N1B4_2183 Argininosuccinate lyase (EC 4.3.2.1) — —
Pseudomonas sp. S08-1 0.36 OH686_18820 Transcriptional regulator, LysR family 0.45 OH686_13885 argininosuccinate lyase low > 80
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_2984 LysR family transcriptional regulator PA3398 0.45 Pf6N2E2_4429 Argininosuccinate lyase (EC 4.3.2.1) — —
Pseudomonas putida KT2440 0.36 PP_1637 Transcriptional regulator, LysR family 0.45 PP_0184 Argininosuccinate lyase low > 96
Pseudomonas sp. RS175 0.36 PFR28_00480 HTH-type transcriptional activator CmpR 0.45 PFR28_04367 Argininosuccinate lyase — —
Pseudomonas stutzeri RCH2 0.36 Psest_2863 Transcriptional regulator 0.45 Psest_3751 argininosuccinate lyase — —
Pseudomonas segetis P6 0.36 ACVTMO_RS16460 LysR family transcriptional regulator 0.45 ACVTMO_RS22450 argH argininosuccinate lyase — —
Pseudomonas aeruginosa PA14 0.35 IKLFDK_17440 LysR family transcriptional regulator 0.44 IKLFDK_27140 argininosuccinate lyase low > 98
Pseudomonas aeruginosa PUPa3 0.35 NPBIFN_01593 yeiE Uncharacterized HTH-type transcriptional regulator YeiE 0.44 NPBIFN_05590 argH argininosuccinate lyase low > 101
Pseudomonas aeruginosa MRSN321 0.35 PFGADD_01554 yeiE Uncharacterized HTH-type transcriptional regulator YeiE 0.44 PFGADD_05514 argH argininosuccinate lyase low > 99
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_05630 LysR family transcriptional regulator 0.45 AO356_12780 argininosuccinate lyase 0.37 68
Pseudomonas orientalis W4I3 0.35 QF045_RS08765 LysR family transcriptional regulator 0.45 QF045_RS01900 argininosuccinate lyase — —
Pseudomonas lactucae CFBP13502 0.35 GEMAOFIL_01341 HTH-type transcriptional activator CmpR 0.45 GEMAOFIL_05646 Argininosuccinate lyase low > 96
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS05920 LysR family transcriptional regulator 0.45 PFLU_RS29220 argininosuccinate lyase — —
Pseudomonas fluorescens SBW25 0.35 PFLU_RS05920 LysR family transcriptional regulator 0.45 PFLU_RS29220 argininosuccinate lyase — —
Pseudomonas simiae WCS417 0.35 PS417_05850 LysR family transcriptional regulator 0.45 PS417_27540 argininosuccinate lyase — —
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_4660 LysR family transcriptional regulator PA3398 0.45 PfGW456L13_854 Argininosuccinate lyase (EC 4.3.2.1) low > 87
Serratia liquefaciens MT49 0.34 IAI46_17215 LysR family transcriptional regulator 0.75 IAI46_24500 argininosuccinate lyase low > 87
Dickeya dadantii 3937 0.33 DDA3937_RS09260 LysR family transcriptional regulator 0.75 DDA3937_RS20340 argininosuccinate lyase low > 74
Methylophilus sp. DMC18 0.33 GFF1962 HTH-type transcriptional activator CmpR 0.46 GFF2150 Argininosuccinate lyase — —
Dechlorosoma suillum PS 0.33 Dsui_2257 transcriptional regulator 0.44 Dsui_0111 argininosuccinate lyase — —
Acinetobacter radioresistens SK82 0.33 MPMX26_02541 HTH-type transcriptional regulator CysL 0.45 MPMX26_00185 Argininosuccinate lyase low > 36
Pectobacterium carotovorum WPP14 0.33 HER17_RS12840 LysR family transcriptional regulator 0.73 HER17_RS20620 argininosuccinate lyase low > 75
Dickeya dianthicola 67-19 0.33 HGI48_RS09285 LysR family transcriptional regulator 0.73 HGI48_RS00885 argininosuccinate lyase low > 71
Dickeya dianthicola ME23 0.32 DZA65_RS09590 LysR family transcriptional regulator 0.73 DZA65_RS00945 argininosuccinate lyase low > 75
Rahnella sp. WP5 0.32 EX31_RS19050 LysR family transcriptional regulator 0.74 EX31_RS14180 argininosuccinate lyase low > 89
Escherichia coli Nissle 1917 0.32 ECOLIN_RS12630 DNA-binding transcriptional regulator YeiE 0.75 ECOLIN_RS22855 argininosuccinate lyase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_01554 HTH-type transcriptional regulator CysL 0.75 OHPLBJKB_04090 Argininosuccinate lyase low > 74
Erwinia amylovora T8 0.32 OLJFJH_11795 DNA-binding transcriptional regulator YeiE 0.74 OLJFJH_06130 argininosuccinate lyase low > 58
Escherichia coli BL21 0.32 ECD_02086 putative DNA-binding transcriptional regulator 0.75 ECD_03845 argininosuccinate lyase low > 61
Escherichia coli ECRC100 0.32 OKFHMN_23495 yieE DNA-binding transcriptional regulator YeiE 0.75 OKFHMN_13575 argH argininosuccinate lyase low > 79
Acinetobacter baumannii LAC-4 0.32 RR41_RS15435 LysR family transcriptional regulator GigC 0.45 RR41_RS17680 argininosuccinate lyase low > 55
Escherichia coli ECOR38 0.32 HEPCGN_22760 yieE DNA-binding transcriptional regulator YeiE 0.75 HEPCGN_12220 argH argininosuccinate lyase 0.32 64
Escherichia coli ECRC98 0.32 JDDGAC_27455 yieE DNA-binding transcriptional regulator YeiE 0.75 JDDGAC_17200 argH argininosuccinate lyase low > 87
Escherichia coli ECRC101 0.32 MCAODC_14545 yieE DNA-binding transcriptional regulator YeiE 0.75 MCAODC_04075 argH argininosuccinate lyase low > 87
Escherichia coli ECRC62 0.32 BNILDI_13990 yieE DNA-binding transcriptional regulator YeiE 0.75 BNILDI_05805 argH argininosuccinate lyase low > 75
Escherichia coli ECRC99 0.32 KEDOAH_04690 yieE DNA-binding transcriptional regulator YeiE 0.75 KEDOAH_14585 argH argininosuccinate lyase — —
Escherichia coli ECRC102 0.32 NIAGMN_21260 yieE DNA-binding transcriptional regulator YeiE 0.74 NIAGMN_11325 argH argininosuccinate lyase low > 80
Escherichia coli BW25113 0.32 b2157 yeiE predicted DNA-binding transcriptional regulator (NCBI) 0.75 b3960 argH argininosuccinate lyase (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF3777 LysR family transcriptional regulator YeiE 0.74 GFF2346 Argininosuccinate lyase (EC 4.3.2.1) low > 78
Pantoea sp. MT58 0.32 IAI47_06680 LysR family transcriptional regulator 0.75 IAI47_00920 argininosuccinate lyase low > 76
Pantoea agglomerans CFBP13505 P0401 0.32 PagCFBP13516_RS07050 yieE DNA-binding transcriptional regulator YeiE 0.75 PagCFBP13516_RS00915 argH argininosuccinate lyase low > 80
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS21575 transcriptional regulator 0.42 HSERO_RS14685 argininosuccinate lyase — —
Klebsiella michiganensis M5al 0.31 BWI76_RS19690 LysR family transcriptional regulator 0.75 BWI76_RS00855 argininosuccinate lyase 0.47 21
Enterobacter sp. TBS_079 0.31 MPMX20_03128 HTH-type transcriptional activator CmpR 0.74 MPMX20_04520 Argininosuccinate lyase 0.36 68
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0399 Transcriptional regulator 0.74 EX28DRAFT_4422 argininosuccinate lyase low > 76
Klebsiella pneumoniae MKP103 0.31 KDGMDA_26645 DNA-binding transcriptional regulator YeiE 0.76 KDGMDA_09375 argininosuccinate lyase low > 94
Klebsiella pneumoniae MRSN742743 0.31 GJGHJB_01572 yeiE DNA-binding transcriptional regulator YeiE 0.76 GJGHJB_04891 argH argininosuccinate lyase low > 83
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS13965 LysR family transcriptional regulator 0.40 RR42_RS15925 argininosuccinate lyase — —
Castellaniella sp019104865 MT123 0.30 ABCV34_RS05920 LysR substrate-binding domain-containing protein 0.44 ABCV34_RS03060 argininosuccinate lyase — —
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS10365 LysR family transcriptional regulator 0.42 ABZR87_RS16170 argininosuccinate lyase low > 80
Erwinia tracheiphila HP pepo 2.2 0.30 IJEDHG_25865 yieE DNA-binding transcriptional regulator YeiE 0.73 IJEDHG_13060 argH argininosuccinate lyase low > 61
Erwinia tracheiphila SCR3 0.30 LU632_RS17295 LysR family transcriptional regulator 0.73 LU632_RS19600 argH argininosuccinate lyase low > 73
Escherichia fergusonii Becca 0.29 EFB2_01699 HTH-type transcriptional regulator CysL 0.75 EFB2_04654 Argininosuccinate lyase low > 86
Escherichia coli ECOR27 0.29 NOLOHH_15070 yieE DNA-binding transcriptional regulator YeiE 0.75 NOLOHH_05720 argH argininosuccinate lyase low > 75
Shewanella amazonensis SB2B 0.29 Sama_1882 LysR family transcriptional regulator (RefSeq) 0.65 Sama_0260 argininosuccinate lyase (RefSeq) low > 62
Ralstonia solanacearum UW163 0.29 UW163_RS12175 LysR family transcriptional regulator 0.42 UW163_RS09390 argininosuccinate lyase — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS14705 LysR family transcriptional regulator 0.42 RALBFv3_RS04280 argininosuccinate lyase — —
Ralstonia solanacearum GMI1000 0.28 RS_RS05515 LysR family transcriptional regulator 0.41 RS_RS11865 argininosuccinate lyase — —
Ralstonia solanacearum PSI07 0.28 RPSI07_RS18655 LysR family transcriptional regulator 0.40 RPSI07_RS13080 argininosuccinate lyase — —
Marinobacter adhaerens HP15 0.27 HP15_2201 transcriptional regulator, LysR family 0.45 HP15_243 argininosuccinate lyase — —
Variovorax sp. SCN45 0.27 GFF3160 Transcriptional regulator YeiE, LysR family 0.43 GFF3824 Argininosuccinate lyase (EC 4.3.2.1) — —

Not shown: 6 genomes with orthologs for CSW01_11795 only; 35 genomes with orthologs for CSW01_13360 only