Conservation of cofitness between CSW01_04975 and CSW01_13360 in Vibrio cholerae E7946 ATCC 55056

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04975 transcriptional regulator 1.0 CSW01_13360 argininosuccinate lyase 0.48 15
Enterobacter sp. TBS_079 0.56 MPMX20_01085 HTH-type transcriptional regulator CueR 0.74 MPMX20_04520 Argininosuccinate lyase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF4405 HTH-type transcriptional regulator cueR 0.74 GFF2346 Argininosuccinate lyase (EC 4.3.2.1) low > 78
Enterobacter asburiae PDN3 0.55 EX28DRAFT_2473 Cu(I)-responsive transcriptional regulator 0.74 EX28DRAFT_4422 argininosuccinate lyase low > 76
Escherichia coli ECOR38 0.54 HEPCGN_06670 cueR Cu(I)-responsive transcriptional regulator 0.75 HEPCGN_12220 argH argininosuccinate lyase low > 85
Escherichia coli ECRC99 0.54 KEDOAH_19935 cueR Cu(I)-responsive transcriptional regulator 0.75 KEDOAH_14585 argH argininosuccinate lyase — —
Escherichia coli ECRC101 0.54 MCAODC_27250 cueR Cu(I)-responsive transcriptional regulator 0.75 MCAODC_04075 argH argininosuccinate lyase — —
Escherichia coli ECRC101 0.54 OKFHMN_08035 cueR Cu(I)-responsive transcriptional regulator 0.75 OKFHMN_13575 argH argininosuccinate lyase — —
Escherichia coli ECRC98 0.54 JDDGAC_11680 cueR Cu(I)-responsive transcriptional regulator 0.75 JDDGAC_17200 argH argininosuccinate lyase — —
Klebsiella michiganensis M5al 0.54 BWI76_RS06910 transcriptional regulator 0.75 BWI76_RS00855 argininosuccinate lyase low > 92
Escherichia coli ECRC102 0.54 NIAGMN_06085 cueR Cu(I)-responsive transcriptional regulator 0.74 NIAGMN_11325 argH argininosuccinate lyase — —
Escherichia coli BW25113 0.54 b0487 cueR DNA-binding transcriptional activator of copper-responsive regulon genes (NCBI) 0.75 b3960 argH argininosuccinate lyase (NCBI) low > 76
Escherichia coli ECOR27 0.54 NOLOHH_01000 cueR Cu(I)-responsive transcriptional regulator 0.75 NOLOHH_05720 argH argininosuccinate lyase low > 57
Rahnella sp. WP5 0.54 EX31_RS22580 Cu(I)-responsive transcriptional regulator 0.74 EX31_RS14180 argininosuccinate lyase low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_03187 HTH-type transcriptional regulator CueR 0.75 OHPLBJKB_04090 Argininosuccinate lyase low > 73
Escherichia coli BL21 0.54 ECD_00438 copper-responsive regulon transcriptional regulator 0.75 ECD_03845 argininosuccinate lyase low > 60
Escherichia coli ECRC62 0.54 BNILDI_22420 cueR Cu(I)-responsive transcriptional regulator 0.75 BNILDI_05805 argH argininosuccinate lyase — —
Escherichia coli Nissle 1917 0.53 ECOLIN_RS02880 Cu(I)-responsive transcriptional regulator 0.75 ECOLIN_RS22855 argininosuccinate lyase — —
Escherichia fergusonii Becca 0.53 EFB2_03572 HTH-type transcriptional regulator CueR 0.75 EFB2_04654 Argininosuccinate lyase low > 86
Pantoea sp. MT58 0.51 IAI47_14395 Cu(I)-responsive transcriptional regulator 0.75 IAI47_00920 argininosuccinate lyase low > 76
Serratia liquefaciens MT49 0.51 IAI46_05315 Cu(I)-responsive transcriptional regulator 0.75 IAI46_24500 argininosuccinate lyase low > 86
Dickeya dianthicola 67-19 0.50 HGI48_RS05895 Cu(I)-responsive transcriptional regulator 0.73 HGI48_RS00885 argininosuccinate lyase low > 71
Dickeya dianthicola ME23 0.50 DZA65_RS06230 Cu(I)-responsive transcriptional regulator 0.73 DZA65_RS00945 argininosuccinate lyase low > 75
Pectobacterium carotovorum WPP14 0.50 HER17_RS15620 Cu(I)-responsive transcriptional regulator 0.73 HER17_RS20620 argininosuccinate lyase low > 75
Dickeya dadantii 3937 0.50 DDA3937_RS05850 Cu(I)-responsive transcriptional regulator 0.75 DDA3937_RS20340 argininosuccinate lyase low > 74
Erwinia tracheiphila SCR3 0.47 LU632_RS15290 cueR Cu(I)-responsive transcriptional regulator 0.73 LU632_RS19600 argH argininosuccinate lyase low > 74
Pseudomonas stutzeri RCH2 0.40 Psest_0737 Cu(I)-responsive transcriptional regulator 0.45 Psest_3751 argininosuccinate lyase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_0653 transcriptional regulator, MerR family 0.46 Psyr_0065 argininosuccinate lyase — —
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_0653 transcriptional regulator, MerR family 0.46 Psyr_0065 argininosuccinate lyase — —
Pseudomonas putida KT2440 0.39 PP_0585 putative metal-sensitive transcriptional regulator, MerR family 0.45 PP_0184 Argininosuccinate lyase low > 96
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_08070 transcriptional regulator 0.45 AO356_12780 argininosuccinate lyase low > 104
Dinoroseobacter shibae DFL-12 0.39 Dshi_4066 transcriptional regulator, MerR family (RefSeq) 0.41 Dshi_3062 argininosuccinate lyase (RefSeq) — —
Pseudomonas sp. S08-1 0.39 OH686_07400 Cu(I)-responsive transcriptional regulator 0.45 OH686_13885 argininosuccinate lyase low > 80
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_3488 Cu(I)-responsive transcriptional regulator 0.45 Pf6N2E2_4429 Argininosuccinate lyase (EC 4.3.2.1) — —
Pseudomonas simiae WCS417 0.39 PS417_03155 transcriptional regulator 0.45 PS417_27540 argininosuccinate lyase — —
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_06160 transcriptional regulator 0.45 AO353_09000 argininosuccinate lyase low > 101
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_25 Cu(I)-responsive transcriptional regulator 0.45 PfGW456L13_854 Argininosuccinate lyase (EC 4.3.2.1) low > 87
Pseudomonas sp. RS175 0.38 PFR28_05243 HTH-type transcriptional regulator HmrR 0.45 PFR28_04367 Argininosuccinate lyase — —
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_1263 Cu(I)-responsive transcriptional regulator 0.45 Pf1N1B4_2183 Argininosuccinate lyase (EC 4.3.2.1) — —
Pseudomonas fluorescens SBW25 0.37 PFLU_RS03235 Cu(I)-responsive transcriptional regulator 0.45 PFLU_RS29220 argininosuccinate lyase — —
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS03235 Cu(I)-responsive transcriptional regulator 0.45 PFLU_RS29220 argininosuccinate lyase — —
Sinorhizobium meliloti 1021 0.36 SM_b21579 MerR family transcriptional regulator 0.43 SMc00725 argininosuccinate lyase low > 103
Dechlorosoma suillum PS 0.36 Dsui_1064 Cu(I)-responsive transcriptional regulator 0.44 Dsui_0111 argininosuccinate lyase — —
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS23915 Cu(I)-responsive transcriptional regulator 0.39 QEN71_RS24970 argininosuccinate lyase low > 153
Phaeobacter inhibens DSM 17395 0.36 PGA1_c02530 HTH-type transcriptional regulator 0.43 PGA1_c03450 argininosuccinate lyase ArgH — —
Rhizobium sp. OAE497 0.35 ABIE40_RS20305 Cu(I)-responsive transcriptional regulator 0.43 ABIE40_RS17520 argininosuccinate lyase — —
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS06865 MerR family transcriptional regulator 0.40 BPHYT_RS05210 argininosuccinate lyase — —
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_04982 transcriptional regulator, MerR family 0.41 H281DRAFT_00194 argininosuccinate lyase low > 103
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS08015 MerR family transcriptional regulator 0.42 HSERO_RS14685 argininosuccinate lyase — —
Magnetospirillum magneticum AMB-1 0.34 AMB_RS09150 Cu(I)-responsive transcriptional regulator 0.41 AMB_RS22715 argininosuccinate lyase — —
Rhodopseudomonas palustris CGA009 0.33 TX73_016860 helix-turn-helix domain-containing protein 0.41 TX73_024645 argininosuccinate lyase — —
Azospirillum sp. SherDot2 0.33 MPMX19_06429 HTH-type transcriptional regulator HmrR 0.45 MPMX19_05817 Argininosuccinate lyase — —
Bosea sp. OAE506 0.32 ABIE41_RS15580 Cu(I)-responsive transcriptional regulator 0.42 ABIE41_RS08750 argininosuccinate lyase — —
Shewanella sp. ANA-3 0.32 Shewana3_2762 MerR family transcriptional regulator (RefSeq) 0.63 Shewana3_3901 argininosuccinate lyase (RefSeq) — —
Shewanella amazonensis SB2B 0.32 Sama_1785 MerR family transcriptional regulator (RefSeq) 0.65 Sama_0260 argininosuccinate lyase (RefSeq) low > 62
Azospirillum brasilense Sp245 0.32 AZOBR_RS27570 MerR family transcriptional regulator 0.45 AZOBR_RS16935 argininosuccinate lyase — —
Shewanella oneidensis MR-1 0.32 SO1687 transcriptional regulator, MerR family (NCBI ptt file) 0.63 SO0279 argH argininosuccinate lyase (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.31 HP15_89 transcriptional regulator, MerR family protein 0.45 HP15_243 argininosuccinate lyase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS11645 helix-turn-helix domain-containing protein 0.41 A4249_RS12555 argininosuccinate lyase low > 48
Agrobacterium fabrum C58 0.30 Atu0938 transcriptional regulator, MerR family 0.42 Atu3599 argininosuccinate lyase — —
Variovorax sp. OAS795 0.29 ABID97_RS02815 Cu(I)-responsive transcriptional regulator 0.43 ABID97_RS08190 argininosuccinate lyase — —
Variovorax sp. SCN45 0.28 GFF3315 Cu(I)-responsive transcriptional regulator 0.43 GFF3824 Argininosuccinate lyase (EC 4.3.2.1) — —

Not shown: 0 genomes with orthologs for CSW01_04975 only; 40 genomes with orthologs for CSW01_13360 only