Conservation of cofitness between CSW01_10410 and CSW01_09655 in Vibrio cholerae E7946 ATCC 55056

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10410 zinc ABC transporter permease 1.0 CSW01_09655 SELO family protein 0.74 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF1638 Zinc ABC transporter, inner membrane permease protein ZnuB 0.44 GFF3534 Selenoprotein O and cysteine-containing homologs low > 78
Klebsiella michiganensis M5al 0.58 BWI76_RS18140 zinc ABC transporter permease 0.45 BWI76_RS17085 hypothetical protein low > 92
Klebsiella pneumoniae MKP103 0.58 KDGMDA_25405 zinc ABC transporter permease subunit ZnuB 0.44 KDGMDA_24305 protein adenylyltransferase SelO low > 95
Escherichia fergusonii Becca 0.58 EFB2_02083 High-affinity zinc uptake system membrane protein ZnuB 0.43 EFB2_02285 Protein adenylyltransferase SelO low > 86
Escherichia coli ECOR27 0.58 NOLOHH_16735 znuB zinc ABC transporter permease subunit ZnuB 0.43 NOLOHH_17645 selO protein adenylyltransferase SelO low > 76
Escherichia coli BL21 0.58 ECD_01830 zinc ABC transporter permease 0.44 ECD_01675 UPF0061 family protein low > 61
Escherichia coli ECOR38 0.58 HEPCGN_04700 znuB zinc ABC transporter permease subunit ZnuB 0.43 HEPCGN_05490 selO protein adenylyltransferase SelO low > 88
Escherichia coli BW25113 0.58 b1859 znuB high-affinity zinc transporter membrane component (NCBI) 0.44 b1706 ydiU hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.57 ECOLIN_RS10355 zinc ABC transporter permease subunit ZnuB 0.43 ECOLIN_RS09535 protein adenylyltransferase SelO
Enterobacter sp. TBS_079 0.57 MPMX20_02765 High-affinity zinc uptake system membrane protein ZnuB 0.44 MPMX20_01907 Protein adenylyltransferase SelO low > 85
Escherichia coli ECRC101 0.57 MCAODC_19110 znuB zinc ABC transporter permease subunit ZnuB 0.43 MCAODC_18285 selO protein adenylyltransferase SelO low > 87
Escherichia coli ECRC99 0.57 KEDOAH_01810 znuB zinc ABC transporter permease subunit ZnuB 0.43 KEDOAH_00985 selO protein adenylyltransferase SelO
Escherichia coli ECRC100 0.57 OKFHMN_26295 znuB zinc ABC transporter permease subunit ZnuB 0.43 OKFHMN_27125 selO protein adenylyltransferase SelO low > 79
Escherichia coli ECRC98 0.57 JDDGAC_00870 znuB zinc ABC transporter permease subunit ZnuB 0.43 JDDGAC_01700 selO protein adenylyltransferase SelO low > 87
Escherichia coli ECRC102 0.57 NIAGMN_01765 znuB zinc ABC transporter permease subunit ZnuB 0.43 NIAGMN_00940 selO protein adenylyltransferase SelO low > 80
Enterobacter asburiae PDN3 0.57 EX28DRAFT_0697 ABC-type Mn2+/Zn2+ transport systems, permease components 0.44 EX28DRAFT_1713 Uncharacterized conserved protein low > 76
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_0278 ABC-3 0.42 Psyr_0494 Protein of unknown function UPF0061 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_0278 ABC-3 0.42 Psyr_0494 Protein of unknown function UPF0061 low > 86
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_600 Zinc ABC transporter, inner membrane permease protein ZnuB 0.43 PfGW456L13_231 Selenoprotein O and cysteine-containing homologs low > 87
Marinobacter adhaerens HP15 0.54 HP15_3523 zinc ABC transporter, permease protein 0.47 HP15_1144 protein belonging to uncharacterized protein family UPF0061
Pantoea sp. MT58 0.54 IAI47_08455 zinc ABC transporter permease subunit ZnuB 0.43 IAI47_10920 YdiU family protein low > 76
Erwinia tracheiphila SCR3 0.54 LU632_RS13405 znuB zinc ABC transporter permease subunit ZnuB 0.41 LU632_RS10980 YdiU family protein
Pantoea agglomerans CFBP13505 P0401 0.54 PagCFBP13505_RS02335 zinc ABC transporter permease subunit ZnuB 0.43 PagCFBP13505_RS17670 YdiU family protein low > 74
Pseudomonas stutzeri RCH2 0.54 Psest_4310 ABC-type Mn2+/Zn2+ transport systems, permease components 0.42 Psest_0396 Uncharacterized conserved protein low > 67
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_10900 hypothetical protein 0.43 AO353_12770 hypothetical protein low > 101
Pseudomonas sp. DMC3 0.53 GFF637 High-affinity zinc uptake system membrane protein ZnuB 0.41 GFF3135 Protein adenylyltransferase SelO low > 89
Dickeya dianthicola ME23 0.53 DZA65_RS10535 zinc ABC transporter permease subunit ZnuB 0.44 DZA65_RS13470 YdiU family protein low > 75
Serratia liquefaciens MT49 0.53 IAI46_14615 zinc ABC transporter permease subunit ZnuB 0.44 IAI46_11065 YdiU family protein low > 87
Pseudomonas segetis P6 0.53 MPMX49_00327 High-affinity zinc uptake system membrane protein ZnuB 0.43 MPMX49_04221 Protein adenylyltransferase SelO low > 75
Rahnella sp. WP5 0.53 EX31_RS10685 zinc ABC transporter permease subunit ZnuB 0.43 EX31_RS13970 YdiU family protein low > 89
Pseudomonas orientalis W4I3 0.53 QF045_RS03320 zinc ABC transporter permease subunit ZnuB 0.43 QF045_RS05205 YdiU family protein low > 93
Dickeya dianthicola 67-19 0.53 HGI48_RS10120 zinc ABC transporter permease subunit ZnuB 0.44 HGI48_RS13010 YdiU family protein low > 71
Erwinia tracheiphila HP pepo 2.2 0.53 IJEDHG_22145 znuB zinc ABC transporter permease subunit ZnuB 0.41 IJEDHG_25400 YdiU family protein
Pseudomonas aeruginosa PA14 0.53 IKLFDK_25905 zinc ABC transporter permease subunit ZnuB 0.42 IKLFDK_28420 YdiU family protein low > 98
Pseudomonas aeruginosa PUPa3 0.53 DQ20_RS58235 znuB;go_function=ATPase-coupled zinc ABC transporter permease subunit ZnuB 0.42 DQ20_RS51140 YdiU family protein low > 101
Pseudomonas aeruginosa MRSN321 0.53 DY961_RS25805 znuB;go_function=ATPase-coupled zinc ABC transporter permease subunit ZnuB 0.42 DY961_RS10935 YdiU family protein low > 100
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS00365 zinc ABC transporter permease subunit ZnuB 0.42 PFLU_RS02195 YdiU family protein low > 109
Pseudomonas fluorescens SBW25 0.52 PFLU_RS00365 zinc ABC transporter permease subunit ZnuB 0.42 PFLU_RS02195 YdiU family protein low > 109
Pseudomonas lactucae CFBP13502 0.52 GEMAOFIL_00278 High-affinity zinc uptake system membrane protein ZnuB 0.43 GEMAOFIL_00665 Protein adenylyltransferase SelO low > 96
Erwinia amylovora T8 0.52 OLJFJH_12865 zinc ABC transporter permease subunit ZnuB 0.44 OLJFJH_14650 YdiU family protein
Pseudomonas sp. RS175 0.52 PFR28_04618 High-affinity zinc uptake system membrane protein ZnuB 0.45 PFR28_05043 Protein adenylyltransferase SelO low > 88
Dickeya dadantii 3937 0.52 DDA3937_RS10090 zinc ABC transporter permease subunit ZnuB 0.44 DDA3937_RS12935 YdiU family protein low > 74
Pseudomonas simiae WCS417 0.52 PS417_00375 membrane protein 0.43 PS417_02140 hypothetical protein low > 88
Pectobacterium carotovorum WPP14 0.51 HER17_RS11815 zinc ABC transporter permease subunit ZnuB 0.44 HER17_RS08850 YdiU family protein low > 75
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_11495 hypothetical protein 0.43 AO356_09050 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_4168 Zinc ABC transporter, inner membrane permease protein ZnuB 0.42 Pf6N2E2_3692 Selenoprotein O and cysteine-containing homologs low > 103
Pseudomonas sp. SVBP6 0.50 COO64_RS02445 znuB zinc ABC transporter permease subunit ZnuB 0.42 COO64_RS13240 selO protein adenylyltransferase SelO 0.40 7
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_1869 Zinc ABC transporter, inner membrane permease protein ZnuB 0.43 Pf1N1B4_1498 Selenoprotein O and cysteine-containing homologs low > 87
Pseudomonas sp. BP01 0.49 JOY50_RS21140 znuB zinc ABC transporter permease subunit ZnuB 0.44 JOY50_RS09370 selO protein adenylyltransferase SelO low > 84
Sinorhizobium meliloti 1021 0.49 SMc04243 high-affinity zinc uptake system membrane ABC transporter protein 0.31 SMc00453 hypothetical protein low > 103
Pseudomonas putida KT2440 0.49 PP_0117 Zn(2+) ABC transporter - permease subunit 0.44 PP_5068 conserved protein of unknown function, UPF0061 family low > 96
Rhizobium sp. OAE497 0.49 ABIE40_RS10940 zinc ABC transporter permease subunit ZnuB 0.33 ABIE40_RS04755 protein adenylyltransferase SelO low > 107
Agrobacterium fabrum C58 0.46 Atu1519 ABC transporter, membrane spanning protein (zinc) 0.32 Atu0945 hypothetical protein low > 89
Pseudomonas sp. S08-1 0.44 OH686_12250 Zinc ABC transporter, permease protein ZnuB 0.43 OH686_09805 UPF0061 protein YdiU low > 80
Dinoroseobacter shibae DFL-12 0.41 Dshi_1701 ABC-3 protein (RefSeq) 0.29 Dshi_1157 protein of unknown function UPF0061 (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.38 PGA1_262p02250 high-affinity zinc uptake system membrane protein ZnuB 0.28 PGA1_c11360 Uncharacterized conserved protein
Acinetobacter baumannii LAC-4 0.31 RR41_RS18190 zinc ABC transporter permease subunit ZnuB 0.33 RR41_RS03080 YdiU family protein low > 55
Acinetobacter radioresistens SK82 0.30 MPMX26_00093 High-affinity zinc uptake system membrane protein ZnuB 0.34 MPMX26_02624 Protein adenylyltransferase SelO low > 36
Xanthobacter sp. DMC5 0.18 GFF276 Manganese transport system membrane protein MntB 0.33 GFF2077 Protein adenylyltransferase SelO
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF3896 ABC transporter in pyoverdin gene cluster, permease component 0.38 GFF4580 Selenoprotein O and cysteine-containing homologs low > 90
Rhodopseudomonas palustris CGA009 0.17 TX73_004430 metal ABC transporter permease 0.33 TX73_015750 YdiU family protein low > 86
Bosea sp. OAE506 0.14 ABIE41_RS08365 metal ABC transporter permease 0.30 ABIE41_RS01530 protein adenylyltransferase SelO low > 77
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS15875 zinc ABC transporter permease 0.42 HSERO_RS11220 hypothetical protein low > 78
Burkholderia phytofirmans PsJN 0.12 BPHYT_RS01385 cation ABC transporter permease 0.39 BPHYT_RS09550 hypothetical protein low > 109
Castellaniella sp019104865 MT123 0.11 ABCV34_RS13445 metal ABC transporter permease 0.32 ABCV34_RS04315 YdiU family protein low > 48
Paraburkholderia bryophila 376MFSha3.1 0.11 H281DRAFT_04164 zinc/manganese transport system permease protein 0.39 H281DRAFT_00914 Uncharacterized conserved protein YdiU, UPF0061 family low > 103
Paraburkholderia graminis OAS925 0.10 ABIE53_003400 zinc/manganese transport system permease protein 0.39 ABIE53_002149 uncharacterized protein YdiU (UPF0061 family) low > 113

Not shown: 18 genomes with orthologs for CSW01_10410 only; 26 genomes with orthologs for CSW01_09655 only