| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_00855 | | MexH family multidrug efflux RND transporter periplasmic adaptor subunit | 1.0 | CSW01_09605 | | endopeptidase La | 0.70 | 10 |
| Shewanella amazonensis SB2B | 0.58 | Sama_3268 | | HlyD family secretion protein (RefSeq) | 0.81 | Sama_1226 | | endopeptidase La (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.58 | Shewana3_0372 | | RND family efflux transporter MFP subunit (RefSeq) | 0.82 | Shewana3_2659 | | Lon-A peptidase (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.57 | SO4327 | | HlyD family secretion domain protein (NCBI ptt file) | 0.82 | SO1796 | lon | ATP-dependent protease La (NCBI ptt file) | low | > 76 |
| Magnetospirillum magneticum AMB-1 | 0.37 | AMB_RS17265 | | MexH family multidrug efflux RND transporter periplasmic adaptor subunit | 0.66 | AMB_RS14035 | | endopeptidase La | low | > 64 |
| Pseudomonas aeruginosa PA14 | 0.35 | IKLFDK_02230 | | multidrug efflux RND transporter periplasmic adaptor subunit MexV | 0.70 | IKLFDK_08760 | | endopeptidase La | low | > 101 |
| Rhodospirillum rubrum S1H | 0.34 | Rru_A3700 | | Secretion protein HlyD (NCBI) | 0.65 | Rru_A1552 | | Peptidase S16, ATP-dependent protease La (NCBI) | low | > 58 |
| Pseudomonas sp. S08-1 | 0.33 | OH686_17365 | | Multidrug efflux system, membrane fusion component | 0.68 | OH686_03635 | | endopeptidase La | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.33 | Psest_1154 | | RND family efflux transporter, MFP subunit | 0.69 | Psest_2285 | | ATP-dependent protease La | low | > 67 |
| Azospirillum sp. SherDot2 | 0.32 | MPMX19_05611 | | Multidrug resistance protein MdtA | 0.66 | MPMX19_01545 | | Lon protease | low | > 112 |
| Azospirillum brasilense Sp245 | 0.31 | AZOBR_RS31315 | | RND transporter | 0.66 | AZOBR_RS07145 | | peptidase | low | > 97 |
| Pseudomonas fluorescens FW300-N2E3 | 0.31 | AO353_03995 | | RND transporter | 0.68 | AO353_20185 | | DNA-binding protein | low | > 101 |
| Pseudomonas putida KT2440 | 0.31 | PP_0907 | | RND efflux membrane fusion protein-related protein | 0.68 | PP_2302 | | DNA-binding, ATP-dependent protease | low | > 96 |
| Pseudomonas sp. BP01 | 0.31 | JOY50_RS14950 | | efflux RND transporter periplasmic adaptor subunit | 0.67 | JOY50_RS25905 | lon | endopeptidase La | low | > 84 |
| Pseudomonas sp. SVBP6 | 0.31 | COO64_RS12060 | | efflux RND transporter periplasmic adaptor subunit | 0.67 | COO64_RS19205 | lon | endopeptidase La | low | > 93 |
| Pseudomonas fluorescens SBW25 | 0.30 | PFLU_RS24400 | | efflux RND transporter periplasmic adaptor subunit | 0.68 | PFLU_RS19160 | | endopeptidase La | low | > 109 |
| Pseudomonas sp. DMC3 | 0.30 | GFF5068 | | Multidrug resistance protein MdtA | 0.68 | GFF1445 | | Lon protease | low | > 89 |
| Pseudomonas simiae WCS417 | 0.30 | PS417_22750 | | RND transporter | 0.68 | PS417_17225 | | DNA-binding protein | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.30 | PFLU_RS24400 | | efflux RND transporter periplasmic adaptor subunit | 0.68 | PFLU_RS19160 | | endopeptidase La | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.30 | PfGW456L13_1772 | | Probable Co/Zn/Cd efflux system membrane fusion protein | 0.69 | PfGW456L13_2554 | | ATP-dependent protease La (EC 3.4.21.53) Type I | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.30 | Pf1N1B4_719 | | Probable Co/Zn/Cd efflux system membrane fusion protein | 0.68 | Pf1N1B4_3947 | | ATP-dependent protease La (EC 3.4.21.53) Type I | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.30 | AO356_18445 | | RND transporter | 0.68 | AO356_01740 | | DNA-binding protein | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.29 | Pf6N2E2_5615 | | Probable Co/Zn/Cd efflux system membrane fusion protein | 0.68 | Pf6N2E2_2216 | | ATP-dependent protease La (EC 3.4.21.53) Type I | — | — |
| Pseudomonas sp. RS175 | 0.29 | PFR28_03329 | | Multidrug export protein AcrE | 0.68 | PFR28_01230 | | Lon protease | low | > 88 |
| Rhodopseudomonas palustris CGA009 | 0.28 | TX73_019550 | | efflux RND transporter periplasmic adaptor subunit | 0.63 | TX73_015345 | | endopeptidase La | — | — |
| Variovorax sp. SCN45 | 0.28 | GFF3510 | | Multidrug efflux system, membrane fusion component => MexH of MexHI-OpmD system | 0.64 | GFF487 | | ATP-dependent protease La (EC 3.4.21.53) Type I | low | > 127 |
| Marinobacter adhaerens HP15 | 0.27 | HP15_3261 | | efflux transporter, RND family, MFP subunit | 0.67 | HP15_2183 | | DNA-binding ATP-dependent protease La | low | > 73 |
| Paraburkholderia sabiae LMG 24235 | 0.27 | QEN71_RS42080 | | efflux RND transporter periplasmic adaptor subunit | 0.68 | QEN71_RS21975 | | endopeptidase La | low | > 153 |
| Xanthobacter sp. DMC5 | 0.26 | GFF2737 | | Multidrug resistance protein MdtE | 0.63 | GFF1156 | | Lon protease | — | — |
| Burkholderia phytofirmans PsJN | 0.26 | BPHYT_RS29555 | | MexH family multidrug efflux RND transporter periplasmic adaptor subunit | 0.68 | BPHYT_RS09460 | | peptidase | — | — |
| Dechlorosoma suillum PS | 0.24 | Dsui_1556 | | RND family efflux transporter, MFP subunit | 0.67 | Dsui_2198 | | ATP-dependent protease La | low | > 51 |
| Bosea sp. OAE506 | 0.24 | ABIE41_RS07730 | | efflux RND transporter periplasmic adaptor subunit | 0.61 | ABIE41_RS18050 | | endopeptidase La | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.22 | GFF4260 | | Probable Co/Zn/Cd efflux system membrane fusion protein | 0.66 | GFF4044 | | ATP-dependent protease La (EC 3.4.21.53) Type I | low | > 90 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.22 | CA265_RS17645 | | efflux transporter periplasmic adaptor subunit | 0.42 | CA265_RS14555 | | endopeptidase La | low | > 88 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.22 | CA264_13035 | | MexH family multidrug efflux RND transporter periplasmic adaptor subunit | 0.44 | CA264_00045 | | endopeptidase La | low | > 74 |
| Caulobacter crescentus NA1000 Δfur | 0.21 | CCNA_01261 | | periplasmic multidrug efflux lipoprotein precursor | 0.62 | CCNA_02037 | | ATP-dependent endopeptidase Lon | — | — |
| Caulobacter crescentus NA1000 | 0.21 | CCNA_01261 | | periplasmic multidrug efflux lipoprotein precursor | 0.62 | CCNA_02037 | | ATP-dependent endopeptidase Lon | low | > 66 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.19 | Echvi_0680 | | RND family efflux transporter, MFP subunit | 0.43 | Echvi_4670 | | ATP-dependent protease La | low | > 79 |
| Bacteroides stercoris CC31F | 0.18 | HMPREF1181_RS09450 | | efflux RND transporter periplasmic adaptor subunit | 0.42 | HMPREF1181_RS14340 | | endopeptidase La | low | > 56 |
| Sphingomonas koreensis DSMZ 15582 | 0.17 | Ga0059261_3803 | | RND family efflux transporter, MFP subunit | 0.59 | Ga0059261_0102 | | endopeptidase La | low | > 68 |
| Dyella japonica UNC79MFTsu3.2 | 0.15 | ABZR86_RS11750 | | efflux RND transporter periplasmic adaptor subunit | 0.66 | ABZR86_RS07320 | | endopeptidase La | low | > 74 |
| Rahnella sp. WP5 | 0.14 | EX31_RS13385 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.82 | EX31_RS22255 | | endopeptidase La | low | > 89 |
| Erwinia amylovora T8 | 0.14 | OLJFJH_08985 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.83 | OLJFJH_17960 | | endopeptidase La | low | > 58 |
| Variovorax sp. OAS795 | 0.14 | ABID97_RS20860 | | efflux RND transporter periplasmic adaptor subunit | 0.66 | ABID97_RS17590 | | endopeptidase La | low | > 91 |
| Herbaspirillum seropedicae SmR1 | 0.13 | HSERO_RS10245 | | hemolysin secretion protein D | 0.68 | HSERO_RS12905 | | peptidase | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.12 | DvMF_0035 | | efflux transporter, RND family, MFP subunit (RefSeq) | 0.54 | DvMF_0112 | | ATP-dependent protease La (RefSeq) | low | > 51 |
| Rhodanobacter sp000427505 FW510-R12 | 0.12 | LRK53_RS02585 | | efflux RND transporter periplasmic adaptor subunit | 0.67 | LRK53_RS12135 | | endopeptidase La | low | > 60 |
| Agrobacterium fabrum C58 | 0.12 | Atu5177 | | efflux protein | 0.62 | Atu1261 | | ATP-dependent protease LA | — | — |
| Pectobacterium carotovorum WPP14 | 0.12 | HER17_RS17200 | | efflux RND transporter periplasmic adaptor subunit | 0.84 | HER17_RS15840 | | endopeptidase La | — | — |
| Dinoroseobacter shibae DFL-12 | 0.10 | Dshi_3902 | | efflux transporter, RND family, MFP subunit (RefSeq) | 0.60 | Dshi_1777 | | ATP-dependent protease La (RefSeq) | low | > 64 |
| Kangiella aquimarina DSM 16071 | 0.09 | B158DRAFT_1406 | | RND family efflux transporter, MFP subunit | 0.69 | B158DRAFT_1038 | | ATP-dependent protease La | low | > 40 |
Not shown: 2 genomes with orthologs for CSW01_00855 only; 56 genomes with orthologs for CSW01_09605 only